prot_H-paniculata_contig1393.2406.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1393.2406.1
Unique Nameprot_H-paniculata_contig1393.2406.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length384
Homology
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BLAST of mRNA_H-paniculata_contig1393.2406.1 vs. uniprot
Match: D7FPF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF4_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 1.310e-10
Identity = 51/154 (33.12%), Postives = 68/154 (44.16%), Query Frame = 0 
Query:  212 RTGATEKRSQGAQCTSPPVDKSIQTTGLRLPRKSAYSRDRILHPRPAVNTVPIAFAQTEVHRNSHPRYSQAKTATAAADAIGETGAEMGEPTYPGSEIEDINGTTVEKGMRGSKDEKVRSGEAAGR---VHVRLGGEILGHAKFGQLPTVWAVS 362
            +TG TE RS+G QC+ PPVD+ +QT+ LRLPRKS  S  R +HPRP   T     +  E   N +                       GE TY       ++         G   E  R G A  R   +HVR+G E +  A  GQ   +W+V+
Sbjct:   44 KTGNTETRSEGVQCSGPPVDQGVQTSALRLPRKSGASTHRTIHPRPLSPTKSSVMSSPEAQVNQY-----------------------GEETYREKASRGLSTPA------GGAHEPARVGIALEREAHIHVRVGLEGVRDADRGQQRAIWSVA 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1393.2406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPF4_ECTSI1.310e-1033.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1393contigH-paniculata_contig1393:3242..6034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1393.2406.1mRNA_H-paniculata_contig1393.2406.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1393 1337..6707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1393.2406.1 ID=prot_H-paniculata_contig1393.2406.1|Name=mRNA_H-paniculata_contig1393.2406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=384bp
MSCTQLVWLVRAVEGPSVLRRPCIRQANRTSAGDGHHLILLRAGCIQPAV
QRLYQTEEVGLRRAVTLTENAVGSDLDSGVSEWGSDDDGETAAFEMLLAE
QTRMSRQLWTSPPSTPTSSATDSPPHRSHRSRRSVRLRRRQSGVEGAQST
TLQEDKSSCKTTADERSAVAPLSVNDNENNPENTTLYPQPPLVAREAGPQ
VPLDVRYCSPYRTGATEKRSQGAQCTSPPVDKSIQTTGLRLPRKSAYSRD
RILHPRPAVNTVPIAFAQTEVHRNSHPRYSQAKTATAAADAIGETGAEMG
EPTYPGSEIEDINGTTVEKGMRGSKDEKVRSGEAAGRVHVRLGGEILGHA
KFGQLPTVWAVSRRKPEDRCGWKKTFGSWGDVM*
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