prot_H-paniculata_contig13911.2399.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13911.2399.1
Unique Nameprot_H-paniculata_contig13911.2399.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig13911.2399.1 vs. uniprot
Match: A0A6H5LE02_9PHAE (DUF3668 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE02_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.970e-9
Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 RFREIQAASQKDLRGRITARIVSIGSGQSGGGGPVERERSDKNKALLEKEEYRAHIHKLARALKRHQAR 69
            RFR+ Q   ++   G +   +  +G+ ++     +ERERS KNKALLEKEEYRA+IHKLARAL+RHQ R
Sbjct:  797 RFRQQQ---RRTPEGGLRQEVYRLGAAKAEAEAQIERERSLKNKALLEKEEYRANIHKLARALRRHQER 862          
BLAST of mRNA_H-paniculata_contig13911.2399.1 vs. uniprot
Match: D7FXH9_ECTSI (Centrosomal protein 120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH9_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 9.450e-9
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 RFREIQAASQKDLRGRITARIVSIGSGQSGGGGPVERERSDKNKALLEKEEYRAHIHKLARALKRHQAR 69
            RFR+ Q   ++   G +   +  +G+ ++     +ERERS KNKALLEKEEYRA+IHKLARAL+ HQ R
Sbjct: 1154 RFRQQQ---RRTPEGGLRQEVYRLGAAKAEAEAQIERERSLKNKALLEKEEYRANIHKLARALRHHQER 1219          
BLAST of mRNA_H-paniculata_contig13911.2399.1 vs. uniprot
Match: A0A7S2SG35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG35_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 1.230e-5
Identity = 26/66 (39.39%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    2 FREIQAASQKDLRGRITARIVSIGSGQSGGGGPVERERSDKNKALLEKEEYRAHIHKLARALKRHQ 67
            F+  + A++K     + A +  +   ++     VERER+++N+ALLEKE+Y+A++H+LARAL+R Q
Sbjct:  460 FQRFREANRKTPEAALRAELARVQGEKAEVQSRVERERTERNQALLEKEQYKAYVHQLARALRREQ 525          
BLAST of mRNA_H-paniculata_contig13911.2399.1 vs. uniprot
Match: A0A7S2GQT6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQT6_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 6.740e-5
Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 0
Query:    2 FREIQAASQKDLRGRITARIVSIGSGQSGGGGPVERERSDKNKALLEKEEYRAHIHKLARALKRHQARR 70
            F   + A ++     +  +I  +   ++   G +E+ER+DKN+ALL+KE+YR  IH L RAL+R Q RR
Sbjct:   35 FDRFRRAHRRMPEAELQTKIARLAGEKAEVEGRIEKERADKNQALLDKEKYRLQIHHLTRALQREQERR 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13911.2399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LE02_9PHAE1.970e-952.17DUF3668 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FXH9_ECTSI9.450e-950.72Centrosomal protein 120 n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SG35_9STRA1.230e-539.39Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GQT6_9STRA6.740e-539.13Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13911contigH-paniculata_contig13911:880..1648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13911.2399.1mRNA_H-paniculata_contig13911.2399.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13911 880..1648 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13911.2399.1 ID=prot_H-paniculata_contig13911.2399.1|Name=mRNA_H-paniculata_contig13911.2399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
RFREIQAASQKDLRGRITARIVSIGSGQSGGGGPVERERSDKNKALLEKE
EYRAHIHKLARALKRHQARRKIFRHV*
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