prot_H-paniculata_contig1391.2397.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1391.2397.1
Unique Nameprot_H-paniculata_contig1391.2397.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length736
Homology
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BLAST of mRNA_H-paniculata_contig1391.2397.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.300e-33
Identity = 79/157 (50.32%), Postives = 103/157 (65.61%), Query Frame = 0 
Query:  547 GAEEQTCPYCGDESGPDVAKHLEECYQQVTGVRNARLSSTTMRPPPVE---ASTAAFQPRRMCGGVGLPSTASGAMTYASTVARQLLQRRVAYADFAALPDSGRFQLHRDLHGWTTSPSRLDLLHKELVRQRNVAMLELQALERDEALLELKLRREW 700
            G +  TC YCG+E+GP V++HLE CY++ T +RN RL   T+RP P        +      +   V LP +A   +   + + RQLL RR+AYA+F +LPD  RFQLH DL GW  SPSRLD L+KELVRQRN A+ ELQAL+R+EA LE+ LR +W
Sbjct: 1099 GVQNFTCVYCGEETGPRVSEHLERCYRKTTAMRNERLKHATLRPLPDNHFLQGGSRLGAASVTEPVSLPPSAC--LDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDW 1253
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BLAST of mRNA_H-paniculata_contig1391.2397.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 6.900e-32
Identity = 77/158 (48.73%), Postives = 99/158 (62.66%), Query Frame = 0 
Query:  547 GAEEQTCPYCGDESGPDVAKHLEECYQQVTGVRNARLSSTTMRPPPVEASTAAFQPRRMCGGVGLPSTAS----GAMTYASTVARQLLQRRVAYADFAALPDSGRFQLHRDLHGWTTSPSRLDLLHKELVRQRNVAMLELQALERDEALLELKLRREW 700
            G +   C YCG+E+GP V++HLE CY++ T +RN RL   T+RP          Q     G   +    S     A+   + + RQLL RR+AYA+F +LPD  RFQLH DL GW  SPSRLD L+KELVRQRN A+ ELQAL+R+EA LE+ LR +W
Sbjct: 1125 GVQNFMCVYCGEETGPWVSEHLERCYRKTTAMRNERLKHATLRPL---RDNHFLQGGSRLGAASVTEPVSVPPSAALDSPAAIGRQLLSRRIAYANFDSLPDPSRFQLHHDLKGWRESPSRLDFLYKELVRQRNAAIYELQALDREEAELEVHLRHDW 1279
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1391.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L313_9PHAE1.300e-3350.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQA3_ECTSI6.900e-3248.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 668..688

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1391contigH-paniculata_contig1391:18999..25298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1391.2397.1mRNA_H-paniculata_contig1391.2397.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1391 17658..26086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1391.2397.1 ID=prot_H-paniculata_contig1391.2397.1|Name=mRNA_H-paniculata_contig1391.2397.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=736bp
MMVNRKWRLWKRLIEIGAYWEKVSGSKNLLTLREPPTVVLPSPASTVAVT
LAARNQAMAAVAAAAAARNRAAAAAARSQATAAVATVAAATAAASGASGA
PSGTASDVVVVEGTNGEQQQQPQQQQQNSSGRAADTGAGVLAVMKSLAAR
CAREARAAGTATSPALPSSQRTDTPPITGVSVVERQPLRRAPPARQSDEE
QGSGNADGIGTRGGASAYTATAAASASTAIGTAAGSRDSSEISDEPVAAS
VEAQAPKAKNGAGMTTEERAAAAAGGKVTSVSSSSSHEAVEPLASATTAN
KSNDRSSGSRSNEEANSGASDGATANDESNMDLPSEAKNPTASNNTSSYS
SSSSIVTAAAIATETGKRPISATAGEGKNGREMEVDVAVGQVANAASAGD
GAAATGQQQTPSTTSTGAVTATAAATAAAVAAPSNDAAAAPSAKRPRIDR
VPAAASRVATPAALAPPPPPAAAPAGVTTVLATPAAAATVPATPRAPMKV
PTAPAPPPAPAMPQHVQARQGDDASQAGQGEVEILQVRLDGVIQRAGAEE
QTCPYCGDESGPDVAKHLEECYQQVTGVRNARLSSTTMRPPPVEASTAAF
QPRRMCGGVGLPSTASGAMTYASTVARQLLQRRVAYADFAALPDSGRFQL
HRDLHGWTTSPSRLDLLHKELVRQRNVAMLELQALERDEALLELKLRREW
AHEGFGGAVSRIWRSIGETSNNNNNNSSSNPVVLD*
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