prot_H-paniculata_contig1389.2380.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1389.2380.1
Unique Name	prot_H-paniculata_contig1389.2380.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	104

Homology

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.020e-63
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 196 bits (499), Expect = 1.450e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.070e-63
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   23 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: B7FX68_PHATC (Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FX68_PHATC)

HSP 1 Score: 196 bits (497), Expect = 2.940e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQG+TLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGKTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: C1MUM2_MICPC (Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1MUM2_MICPC)

HSP 1 Score: 196 bits (497), Expect = 2.940e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: A0A067CU13_SAPPC (Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CU13_SAPPC)

HSP 1 Score: 196 bits (497), Expect = 2.940e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVI+DSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIKDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.940e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: A0A7S3RVL2_9SPIT (Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3RVL2_9SPIT)

HSP 1 Score: 196 bits (497), Expect = 3.030e-63
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

[Close]

BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: H4_ARATH (Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4_ARATH)

HSP 1 Score: 195 bits (496), Expect = 4.170e-63
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Match: A0A0D2MLB1_9CHLO (Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0D2MLB1_9CHLO)

HSP 1 Score: 195 bits (496), Expect = 4.170e-63
Identity = 101/103 (98.06%), Postives = 103/103 (100.00%), Query Frame = 0

Query:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
            MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENV+RD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    1 MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVVRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1389.2380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A024G0M5_9STRA	1.020e-63	100.00	Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI...	[more]
H4_SOLLC	1.450e-63	99.03	Histone H4 n=13 Tax=cellular organisms TaxID=13156...	[more]
A0A3L6V663_9STRA	2.070e-63	100.00	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]
B7FX68_PHATC	2.940e-63	99.03	Histone H4 n=13 Tax=Bacillariophyta TaxID=2836 Rep...	[more]
C1MUM2_MICPC	2.940e-63	99.03	Histone H4 n=20 Tax=Eukaryota TaxID=2759 RepID=C1M...	[more]
A0A067CU13_SAPPC	2.940e-63	99.03	Histone H4 n=5 Tax=Saprolegniaceae TaxID=4764 RepI...	[more]
F0W2L9_9STRA	2.940e-63	99.03	Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID...	[more]
A0A7S3RVL2_9SPIT	3.030e-63	99.03	Histone H4 (Fragment) n=2 Tax=Sar TaxID=2698737 Re...	[more]
H4_ARATH	4.170e-63	98.06	Histone H4 n=272 Tax=Eukaryota TaxID=2759 RepID=H4...	[more]
A0A0D2MLB1_9CHLO	4.170e-63	98.06	Histone H4 n=6 Tax=Eukaryota TaxID=2759 RepID=A0A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 89..100 score: 97.79 coord: 62..76 score: 91.96 coord: 5..16 score: 95.59 coord: 77..89 score: 90.05 coord: 20..39 score: 93.38 coord: 40..60 score: 93.56
IPR001951	Histone H4	SMART	SM00417	h44	coord: 16..90 e-value: 1.8E-29 score: 113.9
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..103 e-value: 2.2E-60 score: 203.1
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..102
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 35..96 e-value: 2.1E-8 score: 34.3
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 1..103
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 1..103
IPR019809	Histone H4, conserved site	PROSITE	PS00047	HISTONE_H4	coord: 15..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1389	contig	H-paniculata_contig1389:1504..1815 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1389.2380.1	mRNA_H-paniculata_contig1389.2380.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1389 1504..1815 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1389.2380.1 ID=prot_H-paniculata_contig1389.2380.1|Name=mRNA_H-paniculata_contig1389.2380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGL
IYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYG
FGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold
IPR035425	CENP-T/H4_C
IPR019809	Histone_H4_CS