prot_H-paniculata_contig13855.2363.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13855.2363.1
Unique Nameprot_H-paniculata_contig13855.2363.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length360
Homology
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.460e-64
Identity = 152/416 (36.54%), Postives = 216/416 (51.92%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+  RD+  G   ++ +    S++  F+V                                  + W     +P ++F    ++R       R    +  +   L            G  L L+VYVD  YAD  + RRSVSG+A  +GG VV+  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+GR KHID+RYHFIR L     + V++    +Q AD+L K L R S + H R LMNLPE
Sbjct:  833 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1246          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.790e-64
Identity = 152/416 (36.54%), Postives = 216/416 (51.92%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+  RD+  G   ++ +    S++  F+V                                  + W     +P ++F    ++R       R    +  +   L            G  L L+VYVD  YAD  + RRSVSG+A  +GG VV+  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+GR KHID+RYHFIR L     + V++    +Q AD+L K L R S + H R LMNLPE
Sbjct: 1212 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1625          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 1.830e-64
Identity = 152/416 (36.54%), Postives = 216/416 (51.92%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+  RD+  G   ++ +    S++  F+V                                  + W     +P ++F    ++R       R    +  +   L            G  L L+VYVD  YAD  + RRSVSG+A  +GG VV+  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+GR KHID+RYHFIR L     + V++    +Q AD+L K L R S + H R LMNLPE
Sbjct: 1375 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 1788          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JU90_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU90_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.850e-64
Identity = 142/364 (39.01%), Postives = 194/364 (53.30%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCS-FWRDI---VRGVAASRNGHSLILSFNVLTWKPSLTFLRLSRQILGLGWRMRSCLTSLCARLGRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+   RD+                                                   +  + G  L L+VYVD  YAD  + RRSVSG+A  +GG VV+  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+GR KHID+RYHFIR L     + V++    +Q AD+L K L R S + H R LMNLPE
Sbjct:  494 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAAIERDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSMVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 855          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 3.290e-61
Identity = 146/418 (34.93%), Postives = 215/418 (51.44%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGH--SLILSFNVLTWKP---SLTFLRLS------------RQILGLG-W---RMRSCLTSLCARLGR------------------------------------DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++A+  + +  +  LD++Q F+Q  L+  VFMKL   CG  S ++VRLNK++YG KQ  R    RLV  L   +   QS S+PCV R      V  ++  HVDD++  G      ++ AAL     T   GE+K++LGC+F RD   G +  S+  +  S++  FNV+       S T +  S            R+++G   W   + R  ++++   + R                                    D+   VYVD D+A K+  RRSVSG  V + G +V  TS TQ CV  STSEA+Y+ M  G K ALF   +L+FL+P    R I +LEDN+GA  +A+NP S+GRRKHID+R+HF+R L     +++ +   ++Q ADIL K L R  FE H  F++ L E
Sbjct:  263 LLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVMGMVAIHVDDILYAGSKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVMENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLSE 679          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 7.300e-61
Identity = 143/416 (34.38%), Postives = 205/416 (49.28%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNVLTWK--PSLTFLRLS-------------RQILG--------------------------------------LGWRMRSCLTSLCARLGR--DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNL 357
            ++ A+  E +  +   D+KQ F+Q++L+ +VFM+L E CG  S  IV+LNK++YG KQ  R     L   L+  +   Q  ++ CVFRL   G V + L  HVDD+   G+   C+     L         G+L+WY GC + RD   G   ++       L + F V   K  P    L+LS             R+++G                                      LG+ +R+    +  R G    L++ V+VD DYA K+  RRSVSG  VM GGG ++  S TQ CVTLST+EA+YV +A   K  LF R V  F+ P+     I + EDNQGA  +A+NP S    KHID+R+HFIREL+ RK + + + +   Q AD L K L  G FE H  ++M++
Sbjct:   23 LLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLIC-LGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.250e-60
Identity = 141/413 (34.14%), Postives = 206/413 (49.88%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMN 356
            +++AV  E    +   DVKQ F  A L+ +VF++L   CG KS ++V+  +A+YG KQ GR       + LV N    Q K++PCVFR  +  VV        D ++V G   +C  L A+L   F T   GE  W+ GC+  RD+  G   ++ +    S++  F+V                                  + W     +P ++F    ++R       R    +  + A L            G  L L+VYVD  YAD  + RRSVSG+A  +GG V++  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+ R KHID+RYHFIR L     + +++    +Q AD+L K L + S + H R LMN
Sbjct:   96 LMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JTV6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV6_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 2.430e-60
Identity = 147/413 (35.59%), Postives = 212/413 (51.33%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG-VAASRNGHSLIL--------SFNVLTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKH-------------------------IDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+  RD+  G +  S+  +   +        +   + W     +P ++F    ++R       R    +  +   L            G  L L+VYVD  YAD  + RRSV+G+A  +GG VV+  S TQ  V+LS++EA+Y+   +G K ALF RAVL F+ P+ SG  I +LEDNQGA  + +NP S+GR KH                         ID+R+HFI  LI    + V++    +Q AD+L K L R S + H   LMNLPE
Sbjct:  633 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDVEAGTLRISQTAYIDSMGEEWPAREAIGSMVWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVAGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHRREISFHRRIEFXVFVFDGSRVARNIDVRFHFIGGLIRSGDISVKFVPTTEQHADLLTKALSRASLKYHRHKLMNLPE 1043          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.630e-60
Identity = 146/416 (35.10%), Postives = 211/416 (50.72%), Query Frame = 0
Query:    1 MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDIVRG---VAASRNGHSLILSFNV----------------------------------LTW-----KPSLTFL--RLSRQILGLGWRMRSCLTSLCARL------------GRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +++AV  E    +   DVKQ +  A L+ EVF+KL   CG+KS +I +  +A+YG KQ GR       + LV N    Q K++PCVFR     VV MI+  +VDD++V G   +C  L A+L  +F T   GE +W+ GC+  RD+  G   ++ +    S++  F+V                                  + W     +P ++F    ++R       R    +  +   L            G  L L+VYVD  YAD  + RRSVS +A  +GG VV+  S  +  V+LS++EA+Y+   +G K ALF RAVL F+ P+  G  I +LEDNQGA  + +NP S+G  KHID+R+HFIR L       V++    +Q ADIL + L R S + H R LMNLPE
Sbjct:  424 LMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDARYADTED-RRSVSRLATTVGGTVVSHGSKARSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETRGSSIQVLEDNQGAIALVQNPLSSGGMKHIDVRFHFIRGLFRSGDTSVKFVPTTEQHADILTQALSRASLQYHRRKLMNLPE 837          
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 4.690e-60
Identity = 139/375 (37.07%), Postives = 194/375 (51.73%), Query Frame = 0
Query:   17 DVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLNKAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILCAHVDDVIVPGKSVECNSLFAALRAEFQTTR-GELKWYLGCSFWRDI---------------------------VRGVAASRNGHSLI----LSFNVLTWKPSLTFLRLSRQILGLGWRMRSCLTSLCARLGRDLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSEAKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTSAGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERHGRFLMNLPE 359
            +VKQ +    L+ EVF++L   CG+KS +IV+  +A+YG KQ GR         LV +    Q K++PCVFR     VV MI+  ++DD++V G   +C  L A+L     T   GE +W+ G     D+                           VR    S    S      +SF V  W      +  S+    LG         +  + G  L L+VYVD  YAD  + RRSVSG+A  +GG V++  S TQ  V++S++EA+Y+   +G K ALF RAVL F+ P+ SG  I +L+DNQGA  + +NP  +GR KHID+RYHFIR L     + V++    +Q AD+L K L R S + H R LMNLPE
Sbjct:  140 NVKQPYTHPTLDEEVFLRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHAAGTLVES-RFEQCKADPCVFRKMVDEVVVMIIVIYLDDILVAGSDEDCEELLASLNKTNPTNSLGECEWFDGMVRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRAWDAIQKIVGYSKGTRDLG---------ITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVLSFVPPETSGSSIEVLDDNQGAIALVQNPLRSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE 503          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13855.2363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE1.460e-6436.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.790e-6436.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.830e-6436.54Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JU90_9PHAE1.850e-6439.01Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPV1_9PHAE3.290e-6134.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE7.300e-6134.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE1.250e-6034.14Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JTV6_9PHAE2.430e-6035.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQN6_9PHAE2.630e-6035.10Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQ05_9PHAE4.690e-6037.07Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..142
e-value: 2.7E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 201..324
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 201..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13855contigH-paniculata_contig13855:69..1315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13855.2363.1mRNA_H-paniculata_contig13855.2363.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13855 69..1559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13855.2363.1 ID=prot_H-paniculata_contig13855.2363.1|Name=mRNA_H-paniculata_contig13855.2363.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=360bp
MVIAVGVETDWGMWQLDVKQTFIQANLEFEVFMKLRESCGNKSDRIVRLN
KAMYGFKQGGRMSSKRLVEVLVNNVSMTQSKSEPCVFRLERSGVVDMILC
AHVDDVIVPGKSVECNSLFAALRAEFQTTRGELKWYLGCSFWRDIVRGVA
ASRNGHSLILSFNVLTWKPSLTFLRLSRQILGLGWRMRSCLTSLCARLGR
DLNLSVYVDEDYADKSNWRRSVSGVAVMLGGGVVNATSTTQHCVTLSTSE
AKYVVMAQGAKAALFTRAVLEFLQPQLSGRIITILEDNQGAKPMAENPTS
AGRRKHIDLRYHFIRELIARKLLRVEYKKGEDQPADILAKPLERGSFERH
GRFLMNLPE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like