prot_H-paniculata_contig138.2331.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig138.2331.1
Unique Nameprot_H-paniculata_contig138.2331.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length439
Homology
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: D7FN35_ECTSI (Chorein N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN35_ECTSI)

HSP 1 Score: 586 bits (1510), Expect = 4.810e-196
Identity = 316/455 (69.45%), Postives = 361/455 (79.34%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEVLVLLAPGTGVSDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLNRKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGACDAVGVMLPSLTIRTCGADHPAFAKFAAATPLDRLA----AKTAGA-GRGSDKADK------------KEEKKHFMVVRKRVTLSNLQVYCDYGVDSYATDIGAAVTAARNNATNPRPGPGGAXXXXXXXXXXXXXGVSRGAVAAARAVRTVFVRKWKSERHALLFTPLAVEFGAELEQWDFPGGKMVAPVYRLVQMNVGVGDLQTVVDSEQARVLRTALREVVNLVRRSRSNRFVPQAFLPLRNLPPPKVSKPK 438
            MFDDVISTGLQAVLAE+FESVDK QLNVSLVGDIFKESHLELTDLR+KKTLLKD+NL VEVKEGLVGKLVIQGLSGVMTGDPV+VT+ EVLVLL PGT +SD EAGLAARR+ A L+EMFANRYAEDF+EDAL VK  DK+SVQ QNKLNRK+LRHI RK+LS +SI  Q VH+RFELPAGG     PVK SAGVGGGGACDAVGVMLPSLT+RTC  DHPAF KFAA TPL+R+A     +  GA GRGS + +             + ++K+FM+VRKR T +NLQVYCDYGVDSY T + AAV AARN ATNPRPG  G+               + GA AAA+AVR +F++KWKSERHALLF PLAVE GAE+ QWD PGGK +AP YR+ ++NVGVG+LQ VVDSEQ RV+   + E++NLVRRSR NRF+PQA+LPLRNLPPPKV  PK
Sbjct:    1 MFDDVISTGLQAVLAEIFESVDKNQLNVSLVGDIFKESHLELTDLRIKKTLLKDMNLPVEVKEGLVGKLVIQGLSGVMTGDPVTVTVGEVLVLLTPGTTLSDSEAGLAARRMAAALREMFANRYAEDFLEDALGVKAADKLSVQSQNKLNRKLLRHIVRKVLSGVSIILQAVHIRFELPAGGLDGAAPVKNSAGVGGGGACDAVGVMLPSLTVRTCKTDHPAFTKFAAQTPLERVANPKGVQQGGADGRGSPQRESATTMARREQDALQGDRKNFMIVRKRATAANLQVYCDYGVDSYVTAVAAAVAAARNKATNPRPGASGSLPGGGLTPAAN----NSGAAAAAKAVRALFLQKWKSERHALLFKPLAVEIGAEVHQWDQPGGKSIAPTYRVARLNVGVGELQAVVDSEQGRVVGAVVDEIINLVRRSRFNRFIPQAYLPLRNLPPPKVHPPK 451          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: A0A7S3YME8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YME8_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 2.410e-15
Identity = 39/103 (37.86%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEVLVLLAPGTGVSDP 103
            MF  +    L+ +L E+FE VD+  L +S++GD+F ESH+EL+DL LK+ ++ DL     +    +GKL ++G+S  + G  ++V +  V +LL P T  +DP
Sbjct:    1 MFSKLAFNQLKGILGEIFEDVDENTLEISMLGDLFSESHVELSDLYLKQDIINDLLPPFNITRAFIGKLSVRGISEFLAGGDLTVIVDSVGLLLGPATAGADP 103          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: A0A1V9ZSH0_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSH0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.470e-12
Identity = 65/205 (31.71%), Postives = 102/205 (49.76%), Query Frame = 0
Query:   13 VLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEV-LVLLAPGTGVSDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLNRKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGACDAVGVMLPSLTIRTC 216
            +L EVFE VD+  ++VS++GD+F +SHL L  L LK+ +   L +   +  G +G+L +QG+ G +TG PV++ + +V +VL A      D +A      LL  L     NRY    ME     K+E   S  +        LRH        +++  + VHVR +LP+  P  + PV              VGV++P +++ TC
Sbjct: 1223 LLQEVFEPVDEAGVDVSVLGDLFDDSHLRLEHLFLKRDVFNALPVPFALLTGYIGQLHVQGMLGALTGAPVTLVLRDVHVVLSAKSPDWDDADALRLGNELLVALMHRLWNRY---HMEGTGPKKVESLKSWLKMRAFG--TLRH--------MTVKIENVHVRVQLPS--PTLETPV--------------VGVVIPLVSVTTC 1398          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: A0A1V9YW84_9STRA (USP domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YW84_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.890e-8
Identity = 54/208 (25.96%), Postives = 100/208 (48.08%), Query Frame = 0
Query:   14 LAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEV-LVLLAPGTGVSDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLNRKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGACDAVGVMLPSLTIRTCGADH 220
            L EVFE++D+  + +S++GD+F ESHL L DL +K ++   L   +E+  G +G+L ++GL G M G P+ + +     V         D +A   A  LL  LK    NR+    M     +K+E   +      + R++L  I       +++ ++ +++R E+P     S  P++              G+ +P++++ +C   H
Sbjct: 1489 LHEVFEALDEDAVEISVLGDLFDESHLRLEDLFVKPSVFNMLPYPIELVTGYLGQLNVEGLLGAMAGSPLQLIVRNANFVFRVKSVDWDDEKALRFANELLIALKHRLWNRH---HMGGKGAIKVESMKTW-----IKRRMLATI-----DQMTVKWENINIRVEIPLAD--SSLPLQV------------FGIHIPAISVTSCELAH 1669          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: T0R0Q4_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R0Q4_SAPDV)

HSP 1 Score: 64.7 bits (156), Expect = 2.050e-7
Identity = 54/208 (25.96%), Postives = 104/208 (50.00%), Query Frame = 0
Query:   13 VLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEV-LVLLAPGTGVSDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLNRKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGACDAVGVMLPSLTIRTCGAD 219
            +L E+FE +D+  ++VS++GD+F ESHL   +L +K  +   L    +V+   +G++ +QG+ G + G P+++ + +V +VL A     +D +    A  L   L     NR+    ME +   K E   SV+    L R++        L  ++I  + +H+R E+P+  P  +  V              +G+++P+ ++ +C +D
Sbjct:   13 ILRELFEPLDEASVDVSVLGDLFDESHLRFENLFVKLDVFNTLPWPFKVQTAYIGQVHVQGMLGAVAGAPMTLRVRDVHIVLSAKDVDWADVDGLRVANELYVALMHRLWNRH---HMEGSGAKKTE---SVKMW--LKRRIY-----ATLDHMTIKVENIHMRIEVPSPPPTLETHV--------------LGLLIPTFSVTSCESD 193          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: A0A067CBY3_SAPPC (VPS13 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CBY3_SAPPC)

HSP 1 Score: 63.5 bits (153), Expect = 4.230e-7
Identity = 54/208 (25.96%), Postives = 103/208 (49.52%), Query Frame = 0
Query:   13 VLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEV-LVLLAPGTGVSDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLNRKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGACDAVGVMLPSLTIRTCGAD 219
            +L E+FE +D+  ++VS++GD+F ESHL    L +K  +   L    +V+   +G++ +QG+ G + G P+++ + +V +VL A     +D +    A  L   L     NR+    ME +   K E   SV+    L R++        L  ++I  + +H+R E+P+  P  +  V              +G+++P+ ++ +C +D
Sbjct:   13 ILRELFEPLDEASVDVSVLGDLFDESHLRFEYLFVKLDVFNALPWPFKVQTAYIGQVHVQGMLGAVAGAPMTLRVRDVHIVLSAKDVDWTDVDGLRVANELYVALMHRLWNRH---HMEGSGAKKTE---SVKMW--LKRRIY-----ATLDHMTIKVENIHIRIEVPSPPPTLETHV--------------LGLLIPTFSVTSCESD 193          
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Match: A0A0D6LTB7_9BILA (Chorein N-terminal domain-containing protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A0D6LTB7_9BILA)

HSP 1 Score: 52.8 bits (125), Expect = 6.320e-5
Identity = 31/98 (31.63%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    1 MFDDVISTGLQAVLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKTLLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEVLVLLAPGT 98
            M +++++  L   + E  E ++  QL+V+L+        +EL ++ LKKT L+ L+L +EVK GL+GKL +      +  +P ++ +S+VL+++ P T
Sbjct:    1 MLENIVAWVLNNYIGEYLEDLNTDQLSVALLS-----GQVELENVPLKKTALRKLDLPLEVKAGLLGKLTLSVPITHLRSEPWALKLSDVLIIVGPPT 93          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig138.2331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FN35_ECTSI4.810e-19669.45Chorein N-terminal domain-containing protein n=1 T... [more]
A0A7S3YME8_HETAK2.410e-1537.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9ZSH0_9STRA4.470e-1231.71Helicase ATP-binding domain-containing protein n=1... [more]
A0A1V9YW84_9STRA4.890e-825.96USP domain-containing protein n=1 Tax=Thraustothec... [more]
T0R0Q4_SAPDV2.050e-725.96Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CBY3_SAPPC4.230e-725.96VPS13 domain-containing protein n=1 Tax=Saprolegni... [more]
A0A0D6LTB7_9BILA6.320e-531.63Chorein N-terminal domain-containing protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031646Vacuolar protein sorting-associated protein 13, second N-terminal domainPFAMPF16908VPS13coord: 156..421
e-value: 2.4E-7
score: 30.8
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 2..97
e-value: 5.4E-13
score: 49.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig138contigH-paniculata_contig138:279..12891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig138.2331.1mRNA_H-paniculata_contig138.2331.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig138 279..12891 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig138.2331.1 ID=prot_H-paniculata_contig138.2331.1|Name=mRNA_H-paniculata_contig138.2331.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=439bp
MFDDVISTGLQAVLAEVFESVDKRQLNVSLVGDIFKESHLELTDLRLKKT
LLKDLNLSVEVKEGLVGKLVIQGLSGVMTGDPVSVTISEVLVLLAPGTGV
SDPEAGLAARRLLATLKEMFANRYAEDFMEDALRVKLEDKMSVQQQNKLN
RKVLRHICRKLLSSLSITFQTVHVRFELPAGGPGSQKPVKTSAGVGGGGA
CDAVGVMLPSLTIRTCGADHPAFAKFAAATPLDRLAAKTAGAGRGSDKAD
KKEEKKHFMVVRKRVTLSNLQVYCDYGVDSYATDIGAAVTAARNNATNPR
PGPGGAAAAQQAAAQAAAAGVSRGAVAAARAVRTVFVRKWKSERHALLFT
PLAVEFGAELEQWDFPGGKMVAPVYRLVQMNVGVGDLQTVVDSEQARVLR
TALREVVNLVRRSRSNRFVPQAFLPLRNLPPPKVSKPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031646VPS13_N2
IPR026854VPS13_N