prot_H-paniculata_contig1379.2330.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1379.2330.1
Unique Nameprot_H-paniculata_contig1379.2330.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A6H5K9M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M4_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 1.600e-99
Identity = 203/339 (59.88%), Postives = 235/339 (69.32%), Query Frame = 0
Query:  302 YGVRNPAPNMPQRPSQPDCNFFVKAGYCRFGTNCKWHHPYNRLGQVPASQQ------QENRNDRSDRNESGNRPVKE----EERAPCDVFLNTGVCTFGEKCRFRHISRGQLAMESAQGVNHPDPNQLPHRAGMPXXXXXXXXXXXXXXXXXXXXXPTHKNPPTAGGAHSSSTNTPPSQQYAPGDRAGNVTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRTA 630
            Y V  P PNMPQRP+ P+C+ FVK G CRF  NC++HHPY+RLG                    S  N  G   V      ++RAPCD+FLN+G C+FG+KCRFRHISRGQLA+ESA+GVNHPDPNQLP RAG+P  XXXXXXXXXXXXXXXXXXXPTH+NPP   G+HSS+ N  P+  Y           XXXXXXX                             TARHIL+KHKGSRRPASWQDP+G +I+ RTQ QAT+ILQGLR+GIK+ +DF+KVA A+SDCSSAKRGGDL +FGRGKMQRAFEDAAF L +GG+S VVSTDSGVHLIMRTA
Sbjct:  172 YSVERPVPNMPQRPNMPECHGFVKNGCCRFLHNCRYHHPYDRLGMATQDSAGXXXXXXXXXXXXSHENVGGGSGVDAIIGVQDRAPCDMFLNSGHCSFGDKCRFRHISRGQLAVESAKGVNHPDPNQLPRRAGVPACXXXXXXXXXXXXXXXXXXXPTHQNPPQ--GSHSSTIN--PNPAYGQNQMMPQXXXXXXXXXXNGRPGMGGPQNRMGVPSPQKPQPKPITEVTARHILVKHKGSRRPASWQDPSGVSIRQRTQGQATSILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQRAFEDAAFGLPVGGLSGVVSTDSGVHLIMRTA 506          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A836CKW2_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW2_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.880e-34
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            ARHIL+KH+GSRRPASW+DP G  I  R++ QA A+L  +R  I+T +DFA+VA   SDCSSA+ GGDL  FG G+MQ+AFED    L +G IS VV +DSGVH+I+RT
Sbjct:    3 ARHILVKHQGSRRPASWKDPEGIEISARSREQAIAMLNDIRASIRTPEDFARVAQTASDCSSARNGGDLGEFGPGQMQKAFEDGVLALGVGDISGVVESDSGVHIILRT 111          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: D7G0K6_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K6_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 1.180e-32
Identity = 63/84 (75.00%), Postives = 74/84 (88.10%), Query Frame = 0
Query:  520 TARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFED 603
            TARHIL+KHKGSRRPASWQDP G++IK RTQ+QA +ILQGLR+GIK+ +DF+KVA A+SDCSSAKRGGDL +FGRGKMQ    D
Sbjct:   18 TARHILVKHKGSRRPASWQDPAGASIKQRTQAQAASILQGLRSGIKSQEDFSKVATARSDCSSAKRGGDLGTFGRGKMQLGCSD 101          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A7S2Y508_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y508_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.110e-32
Identity = 66/109 (60.55%), Postives = 81/109 (74.31%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A H+LIKH GSRRPASW+DP G+ I+ R++ QA  ILQ LR+ I   +DFA +AA  SDCSSA+ GGDL  FG G+M + FEDA   L+IG IS VV TDSGVH+I+RT
Sbjct:    6 ASHLLIKHSGSRRPASWKDPDGNEIRARSRDQAVQILQTLRSQISGPEDFANLAAQHSDCSSARNGGDLGPFGPGQMMKPFEDATRALQIGEISGVVDTDSGVHIILRT 114          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A2R6S2R0_ACTCC (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6S2R0_ACTCC)

HSP 1 Score: 130 bits (326), Expect = 4.380e-32
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMD-DFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKH+GSRR ASW+DP G  I   T+  A + ++GLR+ I + D  F  VAA  SDCSSAKRGGDL SFG+G+MQ+ FE+A + LK+G ISD+V TDSGVH+IMRT
Sbjct:    8 ASHILIKHQGSRRKASWKDPEGRIITATTREAAVSQIKGLRDDIVSGDAKFEDVAARHSDCSSAKRGGDLGSFGKGQMQKPFEEATYALKVGEISDIVDTDSGVHIIMRT 117          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A1Z5RGG3_SORBI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5RGG3_SORBI)

HSP 1 Score: 132 bits (333), Expect = 6.420e-32
Identity = 70/110 (63.64%), Postives = 83/110 (75.45%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMD-DFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKH+GSRR ASW+DP G AI   T+  A  +++ LR+ I + D  F  +AA  SDCSSAKRGGDL SFGRGKMQ+AFE AAF LK+G ISDVV T+SGVH+I RT
Sbjct:   97 ASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLVRALRDQIVSGDRKFEDIAAENSDCSSAKRGGDLGSFGRGKMQKAFEKAAFALKVGEISDVVDTESGVHIIKRT 206          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A067FUU1_CITSI (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Citrus TaxID=2706 RepID=A0A067FUU1_CITSI)

HSP 1 Score: 129 bits (324), Expect = 8.530e-32
Identity = 68/110 (61.82%), Postives = 83/110 (75.45%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKT-MDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKH+GSRR ASW+DP G  I   T+  A + LQ +R+ I +    F +VA+  SDCSSAKRGGDL +FGRG+MQ+ FE+A +NLKIG IS+VV TDSGVHLIMRT
Sbjct:    9 ASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTDSGVHLIMRT 118          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A1U8KD76_GOSHI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gossypium TaxID=3633 RepID=A0A1U8KD76_GOSHI)

HSP 1 Score: 129 bits (324), Expect = 9.340e-32
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMD-DFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKH+GSRR ASW+DP G  I   T+  A + L+ LR+ I + +  F +VA+  SDCSSAKRGGDL  FGRG+MQ+ FEDA ++LKIG ISD+V TDSGVH+IMRT
Sbjct:   12 ASHILIKHQGSRRKASWKDPEGRVISNTTRDAAVSQLKALRDDIASGNAKFGEVASRHSDCSSAKRGGDLGPFGRGQMQKPFEDATYSLKIGEISDIVDTDSGVHIIMRT 121          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A804M8S2_MAIZE (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Zea mays TaxID=4577 RepID=A0A804M8S2_MAIZE)

HSP 1 Score: 131 bits (330), Expect = 1.490e-31
Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKTMD-DFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKH+GSRR ASW+DP G AI   T+  A  + + LR+ I + D +F  VAA  SDCSSAKRGGDL SFGRGKMQ+ FE AAF LK+G ISDVV T+SGVH+I RT
Sbjct:   93 ASHILIKHEGSRRKASWRDPEGVAISATTRDDAADLARALRDQIVSGDREFEDVAAENSDCSSAKRGGDLGSFGRGKMQKPFEKAAFALKVGEISDVVDTESGVHIIKRT 202          
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Match: A0A6A2YNR4_HIBSY (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YNR4_HIBSY)

HSP 1 Score: 128 bits (322), Expect = 1.770e-31
Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = 0
Query:  521 ARHILIKHKGSRRPASWQDPTGSAIKLRTQSQATAILQGLRNGIKT-MDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRAFEDAAFNLKIGGISDVVSTDSGVHLIMRT 629
            A HILIKHKGSRR ASW+DP G  I   T+  A + L+ LR  I +    F +VA+  SDCSSAKRGGDL SFGRG+MQ+ FEDA+++LK+G ISD+V TDSGVH+I RT
Sbjct:   12 ASHILIKHKGSRRKASWKDPEGQVISNTTRDAAVSRLKALREDIVSGKAKFDEVASRYSDCSSAKRGGDLGSFGRGQMQKPFEDASYSLKVGEISDIVDTDSGVHIIKRT 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1379.2330.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9M4_9PHAE1.600e-9959.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKW2_9STRA7.880e-3459.63Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
D7G0K6_ECTSI1.180e-3275.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectoca... [more]
A0A7S2Y508_9STRA2.110e-3260.55Peptidyl-prolyl cis-trans isomerase n=1 Tax=Fibroc... [more]
A0A2R6S2R0_ACTCC4.380e-3260.91Peptidyl-prolyl cis-trans isomerase n=3 Tax=Actini... [more]
A0A1Z5RGG3_SORBI6.420e-3263.64Peptidyl-prolyl cis-trans isomerase (Fragment) n=2... [more]
A0A067FUU1_CITSI8.530e-3261.82Peptidyl-prolyl cis-trans isomerase n=3 Tax=Citrus... [more]
A0A1U8KD76_GOSHI9.340e-3260.91Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gossyp... [more]
A0A804M8S2_MAIZE1.490e-3163.64Peptidyl-prolyl cis-trans isomerase n=3 Tax=Zea ma... [more]
A0A6A2YNR4_HIBSY1.770e-3160.91Peptidyl-prolyl cis-trans isomerase n=2 Tax=Hibisc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 314..341
e-value: 3.5E-4
score: 29.9
coord: 373..399
e-value: 0.0029
score: 26.8
coord: 422..449
e-value: 4.8E-4
score: 29.4
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 317..340
e-value: 3.5E-5
score: 23.6
coord: 425..448
e-value: 1.4E-7
score: 31.3
coord: 375..397
e-value: 1.3E-4
score: 21.8
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 422..450
score: 14.483
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 314..342
score: 14.324
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 372..400
score: 13.094
NoneNo IPR availableGENE3D3.10.50.40coord: 514..630
e-value: 3.7E-39
score: 135.7
NoneNo IPR availableGENE3D2.30.30.1190coord: 300..355
e-value: 4.0E-5
score: 25.6
NoneNo IPR availableGENE3D4.10.1000.10coord: 366..461
e-value: 1.5E-13
score: 52.5
NoneNo IPR availablePANTHERPTHR10657PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 494..630
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 513..629
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 523..629
e-value: 2.4E-20
score: 73.3
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 516..630
score: 26.064
IPR023058Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved sitePROSITEPS01096PPIC_PPIASE_1coord: 570..590
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 425..451
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 375..397
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 318..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1379contigH-paniculata_contig1379:1752..15971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1379.2330.1mRNA_H-paniculata_contig1379.2330.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1379 591..26247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1379.2330.1 ID=prot_H-paniculata_contig1379.2330.1|Name=mRNA_H-paniculata_contig1379.2330.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MVGYGAPAPASGQYAVPGQVGQAAVVAGNGVQQVQQPQYAQAPTVNGATA
TTVSPYGNPYGTAGSQQQQPQQEQASQGAPGQYGMSQQAQPQQGQPQQQL
QQQQQPQQPQAWQQQQQQQPMGQTQQQQNPVQQQLRQPLQPGAPMAQPGV
TQPGQQSGGYPGYAPQSMSGLQGITAAPQPGFNGPPFGQQAPPQQSQIQQ
PQIMQQQSQGGPGAPGGPSYNGAPGPGGPYQPNGQGLPQGMPSGPNPMYN
NQPGPGPGPIPGMIGGGPPHQNMAPGSGPQSGPGGPGGHGAPGGPGGSNA
KYGVRNPAPNMPQRPSQPDCNFFVKAGYCRFGTNCKWHHPYNRLGQVPAS
QQQENRNDRSDRNESGNRPVKEEERAPCDVFLNTGVCTFGEKCRFRHISR
GQLAMESAQGVNHPDPNQLPHRAGMPPCSFYARTGKCAFGMKCKFDHPTH
KNPPTAGGAHSSSTNTPPSQQYAPGDRAGNVTQGNGTQGTSQKASSNRRA
PAAAPENTPPKAQVPPTQVTARHILIKHKGSRRPASWQDPTGSAIKLRTQ
SQATAILQGLRNGIKTMDDFAKVAAAKSDCSSAKRGGDLSSFGRGKMQRA
FEDAAFNLKIGGISDVVSTDSGVHLIMRTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR000297PPIase_PpiC
IPR023058PPIase_PpiC_CS
IPR036855Znf_CCCH_sf