prot_H-paniculata_contig13778.2323.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13778.2323.1
Unique Nameprot_H-paniculata_contig13778.2323.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length276
Homology
BLAST of mRNA_H-paniculata_contig13778.2323.1 vs. uniprot
Match: D7FQK1_ECTSI (BRISC and BRCA1-A complex member 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK1_ECTSI)

HSP 1 Score: 314 bits (804), Expect = 6.240e-103
Identity = 160/287 (55.75%), Postives = 198/287 (68.99%), Query Frame = 0
Query:    2 GLEEQIKG-FTQSEDIVVSIFVPYCEAGSEWEVVVDAESPNRCPDLVPVPSNEADAGKGFVPGMMETYDVFRIEFLPSLESWDLLRRPDSLAALALDLKRLRREYEVGRLHLSPLKSA-SFHFEAVKDRLEEVEVLVSRAVVRIVFPLWKEQGGEA---------DDGDESNDPDSSTAEA-GPVFVYGRLGIRLRLEWTQMGEGGEKPDVRVLFPPEAQGLARGFRHPPWTSGMTLYDYLPLTQAAVAEPWRQRKQLVATLGARYSVLEYDAQDFTFIHLFLKVCV 276
             L+E + G F QSEDIVVS+F+PYCE+G+EWEVV+D ++P RCPDLVP PS E D  +GF  GM E Y+ +R+  L SL+ WDL RRP SLAALALD+K+LRR +E+ +L  SPL SA SFH   ++DR E++E+LVSRA  R+ FPLW +    A                      AE  GP+FVYGR G+R+R+EWTQ+ +G   PDVRVLFP EAQGL  GFR P W+S  TL DYLP  QAAV  PW +RK LVA L  R++VLEYDAQDFT +HLF+KV V
Sbjct:   34 SLQEPVTGGFAQSEDIVVSVFIPYCESGAEWEVVIDGDAPERCPDLVPFPSTEGDVNRGFTQGMHEAYNTYRLASLESLKKWDLFRRPSSLAALALDIKQLRRNHEIQKLENSPLASAMSFHLGYLRDRQEDIELLVSRAGARLAFPLWPDPTAAAAXXXXXXXXXXXXXXXXXXXXDAEGEGPMFVYGRAGVRVRMEWTQV-DGNRPPDVRVLFPQEAQGLTMGFRQPSWSSETTLGDYLPRAQAAVVTPWSERKNLVAMLAKRHNVLEYDAQDFTMLHLFMKVKV 319          
BLAST of mRNA_H-paniculata_contig13778.2323.1 vs. uniprot
Match: A0A7S3YK41_HETAK (BRISC and BRCA1-A complex member 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YK41_HETAK)

HSP 1 Score: 119 bits (299), Expect = 6.180e-28
Identity = 81/250 (32.40%), Postives = 126/250 (50.40%), Query Frame = 0
Query:   30 EWEVVVDAESPNRCPDLVPVPSNEADAGKGFVPGMMETYDVFRIEFLPSLESWDLLRRPDSLAALALDLKRLRREYEVGRLHLSPLKSASFHFEAVKDRLEEVEVLVS--RAVVRIVFPLWKEQGGEADDGDESNDPDSSTAEAGPVFVYGRLGIRLRLEWT--QMGEGGEKPD-VRVLFPPEAQGLARGFRHPPWTSGMTLYDYLPLTQAAVAEPWRQRKQLVATLGARYSVLEYDAQDFTFIHLFLKV 274
            +W +VVD++S    PDL+P            VPG+ + Y VF +  + SLESWD L   D L  LA+D++   R ++V ++     +      +A++ R + V+VLV      VR+ FPLW          DE+ +      +A P F+     I L L +    +  G   PD V V FP   +    GF  PPW +G +++DYLPL +   A  W  R+++V  L  R + LE+DA D++ IH+ ++V
Sbjct:    2 QWVLVVDSKS-TLPPDLIPQQ----------VPGVDDIYQVFDLGEIESLESWDSLGE-DGLYLLAMDIRNCYRRHQVKKVREMGFQEVENTLDALQHREQSVDVLVDPMEGTVRLRFPLW----------DETTEAKEDLNKA-PSFMVDGCAICLDLTYRIESLTAGRSTPDHVEVSFPHRMKTTKNGFILPPWQAGTSMFDYLPLVRRQAARRWAFRREVVRVLAKRCASLEFDAVDYSSIHILVQV 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13778.2323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQK1_ECTSI6.240e-10355.75BRISC and BRCA1-A complex member 2 n=2 Tax=Ectocar... [more]
A0A7S3YK41_HETAK6.180e-2832.40BRISC and BRCA1-A complex member 2 n=1 Tax=Heteros... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010358BRCA1-A complex subunit BREPANTHERPTHR15189FAMILY NOT NAMEDcoord: 17..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13778contigH-paniculata_contig13778:2165..6871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13778.2323.1mRNA_H-paniculata_contig13778.2323.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13778 2165..6871 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13778.2323.1 ID=prot_H-paniculata_contig13778.2323.1|Name=mRNA_H-paniculata_contig13778.2323.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=276bp
VGLEEQIKGFTQSEDIVVSIFVPYCEAGSEWEVVVDAESPNRCPDLVPVP
SNEADAGKGFVPGMMETYDVFRIEFLPSLESWDLLRRPDSLAALALDLKR
LRREYEVGRLHLSPLKSASFHFEAVKDRLEEVEVLVSRAVVRIVFPLWKE
QGGEADDGDESNDPDSSTAEAGPVFVYGRLGIRLRLEWTQMGEGGEKPDV
RVLFPPEAQGLARGFRHPPWTSGMTLYDYLPLTQAAVAEPWRQRKQLVAT
LGARYSVLEYDAQDFTFIHLFLKVCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010358BRE