|
|
Homology
BLAST of mRNA_H-paniculata_contig10345.228.1 vs. uniprot
Match: D7FZL9_ECTSI (XRRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL9_ECTSI) HSP 1 Score: 115 bits (287), Expect = 1.570e-24 Identity = 74/162 (45.68%), Postives = 99/162 (61.11%), Query Frame = 2
Query: 254 SVFVEFETKEGAGKAV--NGQYSYEGAIVSVNFLQGSSEEKDKIEEEPAALSVPEFEPGKIIHIAGIPNEGVSRETLKEKLAPYGVPKFVDFRFGAIEAWVRFDEVAPAAAAVEGLKE--GLSLFTQDNTVECKATVTLVQGDEEIAYYVKVEEAKLERMGK 727
S+FVEF+ KE A KA+ + Y YEG ++V + S EE+ PA + +E GKIIHIAGIP GVSRE+LK + +G +VDF FG EAW+R A AAA V G KE GL+L + VE K TV+LV+G EE YY ++E+ + ER+ +
Sbjct: 108 SIFVEFDKKEAAEKAIARSEDYFYEGEPIAVRPAR-SDEERAAAHTAPAPEPLV-YEAGKIIHIAGIPESGVSRESLKNAVESFGTALYVDFSFGGREAWIRMQNPAEAAATVSGAKETDGLTLAAE---VEDKGTVSLVEGAEEKDYYDRMEKMRAERLNR 264
BLAST of mRNA_H-paniculata_contig10345.228.1 vs. uniprot
Match: A0A6H5JLX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX5_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 3.460e-17 Identity = 66/181 (36.46%), Postives = 95/181 (52.49%), Query Frame = -3
Query: 1922 VYRVILDDGRKLVGVRFPTAALTSLRTHLNEALEIQKAVVSAGGGGTIEQITPLDTKTLLKAKMAPKTIRSFFSRI--PTPSSPRSTS-AGSKRKSFGSTAAXXXXXXXXXXXXXXXXXXXXKRSKGETLGSAASKGRGMGAAKEMAMAALFGGRAEGGERCSEVMRVKDGSDRRVVTLTE 2455
V RVILDD KLVGVR PT AL++LR HL EA++ +KAVV +GGGG ++ ++P++ KTLL+ K P I SFF R P+PSS S G KR++ S+ K+ KG GS + G+ ++ +AALFG + + S K V+++ +
Sbjct: 187 VNRVILDDSTKLVGVRLPTTALSTLRQHLAEAVQARKAVVDSGGGGGVDPMSPINPKTLLQVKTPPNNILSFFGRATSPSPSSAAIPSPVGGKRQAGVSSGGCSAGRV--------------KKRKGSVGGSERNAGKNSASSTVKGVAALFGSQLGSKDIASSTASAKRDDPPEVISIDD 353
BLAST of mRNA_H-paniculata_contig10345.228.1 vs. uniprot
Match: D7FWB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWB6_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 5.570e-16 Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = -3
Query: 2216 VYRVILDDGRKLVGVRFPTAALTSLRTHLNEALEIQKAVVSAGGGGTIEQITPLDTKTLLKAKMAPKTIRSFFSRIPTPS 2455
V RVILDD KLVGVR PT AL++LR HL EA++ +KAVV +GGGG ++ ++P++ KTLL+ K PK I SFF R +PS
Sbjct: 1085 VNRVILDDSTKLVGVRLPTTALSTLRQHLAEAVQARKAVVDSGGGGGVDPVSPINPKTLLQVKTPPKNILSFFGRAASPS 1164
BLAST of mRNA_H-paniculata_contig10345.228.1 vs. uniprot
Match: A0A6H5JWB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB6_9PHAE) HSP 1 Score: 51.6 bits (122), Expect = 4.150e-5 Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 2
Query: 437 IAGIPNEGVSRETLKEKLAPYGVPKFVDFRFGAIEAWVR 553
IAGIP GVSRE+LK+ + +G ++DF FGA EAW+R
Sbjct: 3 IAGIPESGVSRESLKQAVESFGTALYIDFSFGAREAWIR 41
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Metazoa |
| Seed ortholog score | 80.9 |
| Seed ortholog evalue | 9.7e-13 |
| Seed eggNOG ortholog | 400682.PAC_15715127 |
| Preferred name | SSB |
| KEGG ko | ko:K11090 |
| KEGG Pathway | ko05322,map05322 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000049,GO:0000785,GO:0000791,GO:0000956,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006409,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008033,GO:0008097,GO:0008098,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008334,GO:0009056,GO:0009057,GO:0009451,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016032,GO:0016070,GO:0016071,GO:0019080,GO:0019081,GO:0019222,GO:0019439,GO:0019843,GO:0031123,GO:0031503,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034471,GO:0034613,GO:0034641,GO:0034655,GO:0034660,GO:0042780,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043628,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0045184,GO:0046483,GO:0046700,GO:0046907,GO:0048519,GO:0050657,GO:0050658,GO:0050789,GO:0051031,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0051704,GO:0060255,GO:0065007,GO:0070727,GO:0071044,GO:0071045,GO:0071166,GO:0071426,GO:0071431,GO:0071702,GO:0071704,GO:0071705,GO:0075522,GO:0090304,GO:0097064,GO:0097159,GO:0099116,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1903608,GO:1990825,GO:1990904 |
| EggNOG free text desc. | Sjogren syndrome antigen B (autoantigen La) |
| EggNOG OGs | 38BAC@33154,3BD3Q@33208,COG5193@1,KOG4213@2759 |
| COG Functional cat. | A |
| Best tax level | Metazoa |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001 |
| Exons | 9 |
| Model size | 2457 |
| Cds size | 768 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10345.228.1 >prot_H-paniculata_contig10345.228.1 ID=prot_H-paniculata_contig10345.228.1|Name=mRNA_H-paniculata_contig10345.228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=256bp
MLKVSEDKMEIGRKEALTKEMKEEREARTVKAKGFDKDCDLGIEGVEELF
KDAGKTSYVKICRSGAKHGEKKKLTSVFVEFETKEGAGKAVNGQYSYEGA
IVSVNFLQGSSEEKDKIEEEPAALSVPEFEPGKIIHIAGIPNEGVSRETL
KEKLAPYGVPKFVDFRFGAIEAWVRFDEVAPAAAAVEGLKEGLSLFTQDN
TVECKATVTLVQGDEEIAYYVKVEEAKLERMGKSGKNKFNKRGRGRGRGR
GRGKR* back to topmRNA from alignment at H-paniculata_contig10345:346..7721+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10345.228.1 ID=mRNA_H-paniculata_contig10345.228.1|Name=mRNA_H-paniculata_contig10345.228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7376bp|location=Sequence derived from alignment at H-paniculata_contig10345:346..7721+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GATTGCGAGGGTGGCGGAGCGTTCCGAGATGCTTAAGGTCAGTGAGGACA
AGATGGAGATCGGTCGCAAAGAAGCGCTTACTAAGGAGATGAAGGAGGAG
CGTGAGGCGCGCACTGTGAAGGTATATCACACTTGAATAAATATGTACAT
GTTTTAGCACGTCGTGTGTGTGATAGGTGAAGCAAGCAGCAACCGTACTA
CTACTTCGCACGGCTTTGTGCGCAAAACAATAGGGGGCAGTCACTTGGTG
TGAGTCATGTGTCTTTCTTTCTTTCATCCCGTGAAAACGCAATTTTACTT
GTTTCTCAGATAGATTGAGAGGAAAGAAGCTTAAGCCCACAGTCATGTGT
CTTACCTAGCACAAGAGTCTGCTCGGTTTGTCGTCCATGTCTACAAGTGT
ACAAGGAGGTTTTACGGGTTAATTGTAATTTCGGGTCGCAACGTTTTGTC
GAGGCTGGAGCTTAATTAACTCCAGACGAGCCGCTTGCTCATGATGCATT
TGCGGTCGTCATTCATGGTCGAAGGTTTGAAAGCCTTTTATACCCTGGTC
ATGATTCATATTATACAGTACCATCAATGACTCCTGTTCTATAGATCTCA
AACGATCGCCACGCGTTTGTAGGGGTTATAATCCTTTGAGTCCTGTGGGC
CTGTTTGGTGACATATTACTTGACGTGGGTAGAAACAGTACAATTTCAAG
CACAAAATCAGTGTTCCAAAATGCACCATCCCCCGATAGCGAAGGTGTGA
AGTACTCATGCATACTCATACTCGATAGAGTGTTCACAAAAACAAGTTTG
TGTTTTAAACTTGTGATTTGGTGCTGAATAAATTGTAGTGAGCTCCAGGT
TCCGAACTCCCGTCCACCAGCACCAACTTGGAGATACAAGATGAATTTAG
TCCTTTTCAAATTTCGGAAGTTGGAGACGTTTACGAAATCCGCCGAGTTT
TGAAAAAAAAACTGGTTCTATAGGGAGACGTTGGTGCAGCAAGTGGACTT
GGGTCCGGGATCTGCAGCTAGCTCACTGTGAGCCATGCAGGACCGAATCA
ACTCGAGCACTATCTTCACACAGGGATTTCGAAACGGCACGAATTGCGCC
GCATCAAGGGAGATCGCTAGTTACGAATAGGCACACCTGTCCCTGTCAGC
GGGTCGAGACGGCACAAATTTTGCCGCATGTTGTCATCATGTCGACGAAG
TTGCAGCACGCACCGGCTTGTTGTCGAGACGTAGGAGATGAACGAATTTT
ACAAGCAGATCGTTGCTTTCGCAAATACCCCAATAGAGATTTTGATTACG
TGTTGTGCAGTATGCCAGGGATTTGTAAATCGTCGAAGTGTCGTCATTTT
GATGGATCGTTGTCGTCATCAGGCAAAAGGCTTCGACAAGGACTGCGATC
TAGGTATCGAGGGGGTGGAAGAGCTTTTCAAGGACGCCGGCAAGACCTCA
TACGTGAAAATATGCCGCAGTGGAGCCAAACACGGAGAAAAAAAAAAGCT
CAGTAAGTTCGACGCAAGAATTGCAAGAGAAGCAGAGCGTTGAAATGAAT
AACTCTCAATAAACAGGTTGCTGTAAGAATTGGCGATAAAAGGTGCAACT
TCTGGCGGATTTCTTGGTGTCAATGTTGTTTTGGGCGAATTTTGGGAAGA
TTGTGGATCATTTGACTTTCGCGGATTTTTTTTGCGGAATTGTTTTGCGG
ATTTTTTCCGCTGATTTTTTGCCGTTTTTTTTGCCCCCACCTTGTCCAAG
AATTGGCATGCTAATGCAAACGATAAGACCAATATTTTTTTTAGTTGGTG
GGAGATGAGGCGACTGAGATGCTTTCGCCATTTTTTCCTGTTGGAAACCG
CTACAATTATAGAGGTGATATCTGGTCGATACCGGACACGAGGTGGTACA
AATACCATAAATAATTCACGCTCCTCAGACGTAGAAAGTTGTGCTGGGCT
CAGGAAGCAGAGAGTAGAAAGCCTAGTGTACTTCGTCGGTTTGGAGGATT
ATGGCAATAACTCTGCGGAGGAACGTTTAAATTCTCGCCATCGAAGTAAC
TTCTGCTCACGCGGTAACGAGTCTTCACAATCGATGTGGCTGACCGCGAT
GCTGATATTGAATGAATGTCTGGTGATTTCTTTTGTGTGTGTAATATGTA
TTGGATTATTTGGTTCATAATTTTACACCATAAGATATTGTACCAAACAC
ACTCTTTCGTATTGCGCAGCCTCGGTATTTGTGGAGTTTGAGACGAAGGA
GGGCGCGGGTAAGGCCGTCAATGGGCAGTACAGCTACGAGGGAGCTATTG
TTTCGGTGAGCTAGCATCTCTGCTTGCACGGTCTTGTCAAGTGTTGGAGT
AGTTTAGAGTTGCTAGCTACTGGTACAGCTTGGGAGCATCCCTCTTAATG
CCTTACAATGGCGCAAACTTGTAGCATGAATTATGTGCGTCGAACGCCAA
AATTTCCGTAAGAGGCAGAAATCAGCGAAAGCGTAGCACCTGAATGCCCT
GAAGGAGCGCATCATACAGTAAATATTGGAAGCAGGCAAGGCTAAATCGA
CCGCAGCGTTGAGATATAAAGTTTTCGTAGCTCTCTAGGAAGGTCTCACA
CCGTAATCAGCTGTGGCTTGCGTATACATCAGTATTTGGCCATCGCGAAA
GAAGCCTGCGTTTGCCCGCTCACGCTTTATACACCAAATCCAAGATTGAA
GCCCCCAAACGGCGACGAAACGAACCCCGCTTGCACGTGACATGTACTGA
CCAGCAGTGTAGAGCCCTGACTCTATCTGTCATTCGGCTGATACGAAGTT
CGGTTGCCAAACGGTTGAGATTTACCGTTTCTCGTGCATACATGGCGTAC
GTTTCAATAGTTGTACTATCTCACGTGGAACCACATCAATCCTGGGTACA
AGCGCGTTGCAGTACAGCATGGTGCAGTGGACGACCACTCGATGCCTCGA
ATTTGTCTGCACGGCAGGGTTCCAGTATTTTCGTTGAACAAAATGGTGTG
GATGAAGCAGCGAAAGAAACGCGCTCCTCAAAACCATGGACATGGAATCT
AGTGTGGTCAAGCGAGGTTGTCAAGTTTGTGAAGTGTTCATCTTATAGTA
TTTGCTTATTGTTGTATTAGTTTGAAAATCGAATAATTGTTTTTAATTTG
TATATACAGAAAGATGCCATGCCCTGTAGCCCACACTCTAGGCAAGTTCC
TTCAAACGTAGTGCTTGCTGTGCGTTCGATACATGCTGGACTCTGTAGTA
CTCTAGTACGACTGTGCTCTACAGTTGGTCGTGACTAAGATAGTCTTTCT
GATGCGTTCTACTCCTCTCGTGTGTACGTCCATGTTCGTGTTTATGTGCG
TGTAGGTGAACTTCCTGCAGGGATCTTCCGAGGAGAAAGATAAGATCGAG
GGTTAGTCATGATCATTTGTTGTTGTAAACTTTATCGCTCGCCTTCCGCA
TTTCTGTGTGTTCTCCCTTGGGTGTGCTTTGACTCATTTGCATGGCGATT
GACGTGGGCTTCAACATCGTTGTGGTGCGCGAACGCAGCTTGAGGAGTAC
AGGTACTCATCTTCGATTACACAAGTTGGTGCCACAGACATGAAGAGTCG
GTCGCACCGCACTCTTGCGCAAACTTGTTTGTCGGGTTGCGGATCACCAC
TCGCCATCTGTGTTCGGTGTTGCGTTGCTCTTGCCTTTGACATTGTTGTT
ACTATTACGATTTGTGGCGACAGCGCGATTCCATCGTCCTTACTTTGACA
CTGTTTCGTGCTGTTGTGTTGACTTGTGCGTTCAGAAGAACCAGCAGCGC
TTTCTGTGCCGGAATTCGAGCCGGGCAAAATCATCCACGTGAGTCGGCAG
GGCCAACGGAGTAAAGGCCATTTTTTTAAACCCCCGGAAGGCTAAGGCAA
AAAACTCTATCCGATGCTTCCACACCGAAATGTTTCTACATTTCCTTTAA
CAGAACAGAGTTATTTATTCCTCTCCGGGGTAGGCGCCACCCCAGATCGG
CCGAACCAGGTAGGCAGTGTGGAGGTTGCACCCATTAAAAGACCTCTGAC
TAGACTTCCAGTCATGCTCAGTGCACGAGCTACCTTAATAATTGAGCCAT
TTCACGTACTCGAGCTTGGACTGAAGACTGAAGACTCGACTGAGGCAACA
CAAACGGCAATATGCATGCATATAGTACTTGCCCCTCCATGTGTTTGCTA
CCCAAGTTGGTATACCACAAGCGTGGGTGCTCCCTGTCGTATTGTGGAAA
TTTAAGCGATCCAACTCCATGACTTGTGTTGGACAAGAATTTGGGAACGA
AATAATTTTATCTGTTCATGCTACGGAATTCAAACAACTGACTATCCAAA
GGTGTATTACGGTCGACGTTTTATGTCCCTGGTGTTTCGTTTGCAGATCG
CGGGTATCCCCAATGAGGGTGTCAGCCGCGAGACTCTCAAGGAGAAGTTG
GCCCCCTACGGCGTTCCCAAATTCGTGGACTTCCGGTTCGGGGCCATAGA
GGCCTGGGTCAGGTGGGGGTGGGCGAGTCAAGATTTAGTCGCTCGTTCAA
ACGCTGGATTGATCTGTCATGTGACGCTGTGTCAGCACGTGTATCGTGCG
TGTGTTGTTCGTGATCGACTAAGTAAAGAAGACTGAAGACTTTGTACGAA
CAATGTATTGCACTGGCAATACAAAACGAACTTGGGGGGATCCTGTGGTC
AATTTCTAACCATGGAAGATGGTTTATATATCATACAGGGTTGATTCCAA
TGTGCCGTGGGTTCCACACTAGAGATTCCATACAGATGTGTCGCGCTATT
ACGAGGGTGTTCATGTCATGGTGTTTTGTTATCTTCCCTTCTAAATACTT
GATTGACGGCATGGGAGCATATCGATGTTGATGGATGTGGATGTGGATGT
CCTTGAACAGGTTCGATGAGGTTGCCCCCGCCGCTGCAGCAGTCGAGGGT
CTGAAGGAAGGCCTGTCGCTATTTACCCAAGATAACACCGTGGAGTGCAA
GGCAACGGTCACTCTGGTCCAAGGGGACGAGGAGATCGCCTACTACGTGA
GTGCTTACTCTTTATCCTGTCGCCGTAGCTCTTGCTGCAGCTTGTTCGTT
GTTACTTTTTTGAGTTTTGAGCAGGTGCGGTTTCGATTATGTCAACCATG
ACAAGTGGGACGAGAGGACATGGTGGCTTGCCCTAACTCGCGAGGCAGTA
ACCGTTGGCGTTGTGGCCACTGTCTCGTGCAATTTGTTATTCAGTCCCTG
CATTGGGTCAAACGTACAGTATTCAAATGGCCATTTGTCACGTGTTCAGA
CTGAGCCATCATACCAATATGGTAACACTGGTGCCGGTGTAGCACCCTTT
CTTGAGGTAATTTTATTGATGAATGTAAGCAAGTGCAATTTAAAGTCAGT
TGTATAGCTTCAATATGGGTATTTGATAATGGAGTTATTATGTGACTGTT
ATATCCCTCCCCCCCCCCCCCCAAGTTTGAGTCTAATTACAGTCAAGTCA
AACTACCGTCTCCACTCCTCCCCTTTCCATGCTCTGCACGGCCTGCCTTG
ACTGTCTTTGTATTTGTGGTATTTGTTAATCTACAGGTGAAGGTTGAAGA
GGCGAAATTGGAAAGGATGGGAAAGAGCGGCAAGAACAAGTTCAACAAGA
GAGGAAGGGGCAGAGGCAGGGGCCGGGGTAGGGGAAAGCGTTAGGTGTTC
CCTCGCAGGTGCTGGCGTGCTTATACATCTCTGGAGCCGAAGATGCTGTG
TTGAAATCGTAGTTCGTAGTAAATTCGTGCAGTAGGTCTCAGGTTAGGTT
TGTTTGTCAAATGCCGCTTGGCGTACTATACATCAAACTAGAATATTTGA
GTTTGTCTATTTGGCCAATTGGCTTGCTGGTTTGCTGTTTCGGCGCGCGA
AACGGGGACCACTAGGTGACTAATAAAAACAGGCAGCCTATGAGGTAGAC
TGTGGGAGGAGGGCAGAGGGACGAAGATCGGAGGTGGTTTGTCGGGAGTT
TTTTGTATATCGGCTTTAAGCTTACCGTGGTTTTTAAGGATGTGCCGCCG
GTTATTAAGGATATGCCGCCCCTTAACGGTTTGTGGTAATTGTGCTAGAA
GCCGTGGCAGTGGTTATGATGACTCATGTAAAGATGAGGAGCGAGTGATG
AGACATGTTATGGTTCCAACACTGTTTAGTGTTTCGCGCAATTCCAGACG
AGCGAAACAAAGGGGGCGACTCACGCCATGTAGTTAGCAGCCGTACAGTC
AGTTCGCAATCGGCGTTTTCGAGAAAATGAACAGATTAACTGGATACTTT
TTCACACGTGAAGACGTCACTGGATTCATGTGCGGTAGGTTTTCCGCGCC
CTGGTCCAAATCGCGTCTTGCCCGTCGGATTTCTCTCTATTTTTACGAAC
GTGGCACCTCTAACACGGTACGACAAAATGCATACGACAAACAAACGAGG
GAACCAGGCAGAACGATGTTTGCGGAGCACCGCTTTCACACATATTTCGC
AAGGTCGGACGCTATACTGTTGCTAACATAAATACATTCAATATTCTCGA
GGCATATTAGTCCTAAAGATCAAAATACTCACTGACCGGCGCATTTGCGT
CTCGTTTCCTTTGGTAGTAGGAGCATGGTACATGATGTAACCCTCTTCGT
TGACTGACACTCTGTTCAGACAAGCACAAGAGAGCAAAGGATGGCTGACT
CCAGCGCGTCATCGCCTAGCACACGCTACATAAATACAGTCCTGTCTACA
GTCTACAGGACATTCACGACTAGTTGTTGTGCCTAACGTCTAGTCATCAT
CGATTTCTATGATCTCAATCTCAGTGTGTTTGCCACCTCCTTCTGTTAGA
GTAACGACACGCCTGTCACTCCCATCTTTCACTCTCATGACTTCGCTGCA
CCTTTCACCACCTTCGGCACGACCTCCGAACAAAGCAGCCATTGCCATCT
CTTTGGCTGCACCCATACCCCTTCCCTTGCTGGCGGCGCTGCCAAGGGTC
TCCCCTTTGCTTCTCTTCCCACCACCTCCCCCAGCCAACCCCAACGAAGA
TCCCGAACCCGAAGCAGCAGCAGCAGCAGCAGCAGTACTTCCAAATGATT
TCCTTTTGCTACCGGCTGAAGTTGAGCGTGGAGACGACGGAGTCGGGATG
CGACTGAAAAATGACCGTATGGTTTTGGGGGCCATCTTCGCCTTCAGTAG
GGTTTTGGTGTCGAGCGGGGTAATCTGTTCGATTGTGCCACCTCCTCCCG
CTGATACTACCGCCTTTTGGATTTCGAGAGCTTCGTTCAGGTGGGTTCGT
AGGGAGGTGAGGGCTGCGGTCGGGAAGCGGACCCCAACTAGCTTTCGGCC
ATCGTCCAGGATGACCCGGTACACCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig10345:346..7721+ >mRNA_H-paniculata_contig10345.228.1 ID=mRNA_H-paniculata_contig10345.228.1|Name=mRNA_H-paniculata_contig10345.228.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1536bp|location=Sequence derived from alignment at H-paniculata_contig10345:346..7721+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTAAGGTCAGTGAGGACAAGATGGAGATCGGTCGCAAAGAAGCGCT
TACTAAGGAGATGAAGGAGGAGCGTGAGGCGCGCACTGTGAAGATGCTTA
AGGTCAGTGAGGACAAGATGGAGATCGGTCGCAAAGAAGCGCTTACTAAG
GAGATGAAGGAGGAGCGTGAGGCGCGCACTGTGAAGGCAAAAGGCTTCGA
CAAGGACTGCGATCTAGGTATCGAGGGGGTGGAAGAGCTTTTCAAGGACG
CCGGCAAGACCTCATACGTGAAAATATGCCGCAGTGGAGCCAAACACGGA
GAAAAAAAAAAGCTCAGCAAAAGGCTTCGACAAGGACTGCGATCTAGGTA
TCGAGGGGGTGGAAGAGCTTTTCAAGGACGCCGGCAAGACCTCATACGTG
AAAATATGCCGCAGTGGAGCCAAACACGGAGAAAAAAAAAAGCTCACCTC
GGTATTTGTGGAGTTTGAGACGAAGGAGGGCGCGGGTAAGGCCGTCAATG
GGCAGTACAGCTACGAGGGAGCTATTGTTTCGCCTCGGTATTTGTGGAGT
TTGAGACGAAGGAGGGCGCGGGTAAGGCCGTCAATGGGCAGTACAGCTAC
GAGGGAGCTATTGTTTCGGTGAACTTCCTGCAGGGATCTTCCGAGGAGAA
AGATAAGATCGAGGGTGAACTTCCTGCAGGGATCTTCCGAGGAGAAAGAT
AAGATCGAGGAAGAACCAGCAGCGCTTTCTGTGCCGGAATTCGAGCCGGG
CAAAATCATCCACAAGAACCAGCAGCGCTTTCTGTGCCGGAATTCGAGCC
GGGCAAAATCATCCACATCGCGGGTATCCCCAATGAGGGTGTCAGCCGCG
AGACTCTCAAGGAGAAGTTGGCCCCCTACGGCGTTCCCAAATTCGTGGAC
TTCCGGTTCGGGGCCATAGAGGCCTGGGTCAGATCGCGGGTATCCCCAAT
GAGGGTGTCAGCCGCGAGACTCTCAAGGAGAAGTTGGCCCCCTACGGCGT
TCCCAAATTCGTGGACTTCCGGTTCGGGGCCATAGAGGCCTGGGTCAGGT
TCGATGAGGTTGCCCCCGCCGCTGCAGCAGTCGAGGGTCTGAAGGAAGGC
CTGTCGCTATTTACCCAAGATAACACCGTGGAGTGCAAGGCAACGGTCAC
TCTGGTCCAAGGGGACGAGGAGATCGCCTACTACGTTCGATGAGGTTGCC
CCCGCCGCTGCAGCAGTCGAGGGTCTGAAGGAAGGCCTGTCGCTATTTAC
CCAAGATAACACCGTGGAGTGCAAGGCAACGGTCACTCTGGTCCAAGGGG
ACGAGGAGATCGCCTACTACGTGAAGGTTGAAGAGGCGAAATTGGAAAGG
ATGGGAAAGAGCGGCAAGAACAAGTTCAACAAGAGAGGAAGGGGCAGAGG
CAGGGGCCGGGGTAGGGGAAAGCGTTAGGTGAAGGTTGAAGAGGCGAAAT
TGGAAAGGATGGGAAAGAGCGGCAAGAACAAGTTCAACAAGAGAGGAAGG
GGCAGAGGCAGGGGCCGGGGTAGGGGAAAGCGTTAG back to top
|