prot_H-paniculata_contig137.2279.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig137.2279.1
Unique Nameprot_H-paniculata_contig137.2279.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length240
Homology
[Close]
BLAST of mRNA_H-paniculata_contig137.2279.1 vs. uniprot
Match: A0A6H5K0J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J1_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 7.180e-47
Identity = 135/263 (51.33%), Postives = 152/263 (57.79%), Query Frame = 0 
Query:   11 SAGGRSEAFGISGG---------GVRGAPVSFS--RAPRGQ-GRPPPVPGHLSASTAAMLRSSPGNIASLAELDSYLEHHHRRLVEQVEGGVLTDDVEAEIKASRHQ-RQGTRSHQGLGTTDGSSNGLGSSSSSSGVPRTVGARVSTAPFFHSTLSADGDHPNNHXXXXXRDWNGRGRDGGRQGLK--------------------------GDHPLSSNGVDNGEWDPPQKRGP-YKRERGEPCEDSGDGGWGIHLRGFRGG 233
            +AGGR EAFG+SG              +PVS++  R  RGQ GRPPPVPGHLSASTAAM RSSPG+IASLAELDSYLEHHHRRLVEQVEG V+ DDVEAEI+ASR Q R+  RSH+      G+ +  GS SS S VPRTVGA V+T  FF STLSADG +  N    XX     RG                                   GD   SS+      WDPP +RGP YKR+R        DGGWG  LRGFRGG
Sbjct:  596 TAGGRLEAFGVSGXXXXXXXXXXSFMSSPVSYTSGRGSRGQQGRPPPVPGHLSASTAAMRRSSPGSIASLAELDSYLEHHHRRLVEQVEG-VVADDVEAEIEASRQQHRRNPRSHRSFEAGGGTRSHNGSCSSGSSVPRTVGAGVTTKCFFDSTLSADGYNDYNAGDDXXXXXXFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDQRTSSSRG----WDPPNQRGPGYKRDRDRA---EADGGWGATLRGFRGG 850
[Close]
BLAST of mRNA_H-paniculata_contig137.2279.1 vs. uniprot
Match: D8LF04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF04_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 9.460e-17
Identity = 47/52 (90.38%), Postives = 48/52 (92.31%), Query Frame = 0 
Query:   35 RAPRGQ-GRPPPVPGHLSASTAAMLRSSPGNIASLAELDSYLEHHHRRLVEQ 85
            R  RGQ GRPPPVPGHLSASTAAM RSSPG+IASLAELDSYLEHHHRRLVEQ
Sbjct:  427 RGSRGQQGRPPPVPGHLSASTAAMRRSSPGSIASLAELDSYLEHHHRRLVEQ 478
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig137.2279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0J1_9PHAE7.180e-4751.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF04_ECTSI9.460e-1790.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig137contigH-paniculata_contig137:20143..22417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig137.2279.1mRNA_H-paniculata_contig137.2279.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig137 20143..22417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig137.2279.1 ID=prot_H-paniculata_contig137.2279.1|Name=mRNA_H-paniculata_contig137.2279.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
RHGGGEGQSPSAGGRSEAFGISGGGVRGAPVSFSRAPRGQGRPPPVPGHL
SASTAAMLRSSPGNIASLAELDSYLEHHHRRLVEQVEGGVLTDDVEAEIK
ASRHQRQGTRSHQGLGTTDGSSNGLGSSSSSSGVPRTVGARVSTAPFFHS
TLSADGDHPNNHHNHHHRDWNGRGRDGGRQGLKGDHPLSSNGVDNGEWDP
PQKRGPYKRERGEPCEDSGDGGWGIHLRGFRGGGSDRGGG
back to top