prot_H-paniculata_contig13680.2266.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig13680.2266.1
Unique Name	prot_H-paniculata_contig13680.2266.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	219

Homology

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: D7G7I6_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7I6_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 2.570e-59
Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 0

Query:  112 QKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            Q G+VTVY+KETCPYCKKALALLE DY L V+RVNVLEG+DSEKKIKQMKTFSG NTVPQ+FFNS H+GGNDDVQKLH+DGKL E+V  VRAE  GMMKDSWYHPWY
Sbjct:   65 QAGLVTVYHKETCPYCKKALALLENDYSLQVTRVNVLEGEDSEKKIKQMKTFSGANTVPQVFFNSEHLGGNDDVQKLHEDGKLEELVKKVRAEAPGMMKDSWYHPWY 171

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A835ZFR3_9STRA (Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFR3_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.190e-49
Identity = 90/151 (59.60%), Postives = 110/151 (72.85%), Query Frame = 0

Query:   73 AAGNRIVLPGTKVVRSVGMIR---NRNSIALD-MSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            AA + +V  G   VR +       NR   AL  MS   AV  EQ+G+VTVY+KETCPYC K L LLE +Y L+V+RVNVLEGDDS+KKIKQM+TFSG RNTVPQ+FFNS H+GGNDDVQ LH +GKL+E+V T+ ++ A + K  WYHPWY
Sbjct:   22 AATSAVVQHGGLAVRPLSYASSGGNRAGAALTTMSTGTAV--EQRGLVTVYHKETCPYCVKVLHLLENEYNLSVNRVNVLEGDDSDKKIKQMRTFSGGRNTVPQVFFNSEHLGGNDDVQSLHSEGKLAELVETILSQDASL-KAGWYHPWY 169

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A836CJB3_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 1.760e-44
Identity = 75/118 (63.56%), Postives = 95/118 (80.51%), Query Frame = 0

Query:  102 MSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            MSA A    EQ G+VTVY+KETCP+CKK L LLEGDY L V++V+VL G+DS+K +KQM+TFSG RNTVPQ+FFNS H+GGNDDVQ LH +G+L ++V ++ +EPA  +K  WYHPWY
Sbjct:    1 MSAVATA-TEQLGLVTVYHKETCPHCKKVLELLEGDYGLEVTKVDVL-GEDSDKVLKQMRTFSGGRNTVPQVFFNSHHLGGNDDVQALHAEGELEKLVESILSEPA-TLKKGWYHPWY 115

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A6S9FTA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FTA2_HETAK)

HSP 1 Score: 140 bits (354), Expect = 6.550e-39
Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 0

Query:  101 DMSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQ--MKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            ++ A   +  +Q GIVT+Y K TCP+CK+A ALLEG+Y LN++ V+VLEG++ E+K KQ  MK FS R TVPQIFFNS H+GGNDDVQ LH++G L+ +VA + AE    + + WYHP Y
Sbjct:   40 NLGARGMMMADQAGIVTMYIKSTCPFCKEAKALLEGEYGLNLTVVDVLEGEEGEQKAKQRQMKQFSFRKTVPQIFFNSKHLGGNDDVQTLHREGALAALVAAMNAEGTPRLDEGWYHPHY 159

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A7S1XU45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU45_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.210e-33
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 0

Query:  111 EQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSE--KKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            EQ G VT Y ++ CP+C KA  LLE  Y   ++ VN+ EGD+ E  KKI+ M T+SG R TVPQIFFNS HIGGNDDVQ LH DGKL  M+  VR+ PA  M+D WYHP Y
Sbjct:   38 EQAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRSTPA-TMRDGWYHPHY 147

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A7S1U9K7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9K7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.780e-33
Identity = 64/110 (58.18%), Postives = 76/110 (69.09%), Query Frame = 0

Query:  112 QKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSE--KKIKQMKTFSG-RNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEPAGMMKDSWYHPWY 218
            Q G VT Y ++ CP+C KA  LLE  Y   ++ VN+ EGD+ E  KKI+ M T+SG R TVPQIFFNS HIGGNDDVQ LH DGKL  M+  VR+ PA  M+D WYHP Y
Sbjct:   27 QAGRVTFYMRDGCPFCAKAKELLEDTYDAELTLVNIWEGDEDEQKKKIRSMTTYSGGRQTVPQIFFNSEHIGGNDDVQGLHADGKLQAMLDEVRSTPA-TMRDGWYHPHY 135

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: UPI00055EA9F4 (glutaredoxin 3 n=1 Tax=Methylocapsa aurea TaxID=663610 RepID=UPI00055EA9F4)

HSP 1 Score: 80.1 bits (196), Expect = 3.820e-16
Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 0

Query:  116 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATV 201
            +T+Y   TCPYC++A  LL    K N+    +    D E +++ M+  +GR TVPQIFF+ LH+GG DD+ +LH DGKL  ++A +
Sbjct:    4 ITIYTTATCPYCRRAKELLR---KKNLDFTEIPVDGDGEARMRMMERANGRMTVPQIFFDDLHVGGCDDLHELHYDGKLDLLLADL 86

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A4S8KT64_DENBC (Glutaredoxin n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8KT64_DENBC)

HSP 1 Score: 77.0 bits (188), Expect = 8.190e-15
Identity = 44/102 (43.14%), Postives = 57/102 (55.88%), Query Frame = 0

Query:  102 MSAEAAVDVE-QKGIVTVYYKETCPYCKKALALLE---GDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVA 199
            M+ +  VD       +TV+ K  CPYCK A  LL+   GD K  V  ++  E  D  +   Q KT  G+ TVP IF N  H+GGND VQ  HK+GKL E++A
Sbjct:    1 MAVKDVVDTTIDSNTITVFSKSWCPYCKAAKKLLQESYGDKKTEVVELDEREDGDEIQSYLQEKT--GQRTVPNIFVNKQHVGGNDAVQAAHKNGKLKELLA 100

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: UPI000F02BCA2 (glutaredoxin 3 n=1 Tax=Brevundimonas lutea TaxID=2293980 RepID=UPI000F02BCA2)

HSP 1 Score: 75.5 bits (184), Expect = 2.080e-14
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0

Query:  116 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVA 199
            V +Y K  CPYC +A+ALL+      V   N++  +D EKK + ++  +GR T PQIF +  HIGG+DD+Q L + GKL  ++A
Sbjct:    4 VVLYTKPGCPYCIRAMALLDSK---GVEYENIVASNDPEKKAEMVQRANGRATFPQIFIDGRHIGGSDDLQALDRQGKLDPLLA 84

[Close]

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Match: A0A0S7ESE5_9TELE (GLRX1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7ESE5_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 6.090e-14
Identity = 42/90 (46.67%), Postives = 57/90 (63.33%), Query Frame = 0

Query:  116 VTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEGDDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVATVRAEP 205
            VTVY  + CP+C +A A L     L V    V  G  SE ++K +K  +GR+TVPQIFFN +H+GGNDD+QKL  + +L  +V  V+ EP
Sbjct:    2 VTVYSIQGCPHCVQAKATLRS---LGVPVCEVDVGLHSELRVK-LKELTGRSTVPQIFFNGIHVGGNDDLQKLATE-ELQRLVTLVKEEP 86

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig13680.2266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7I6_ECTSI	2.570e-59	82.24	Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A835ZFR3_9STRA	1.190e-49	59.60	Glutaredoxin n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
A0A836CJB3_9STRA	1.760e-44	63.56	Thioredoxin-like protein n=1 Tax=Tribonema minus T...	[more]
A0A6S9FTA2_HETAK	6.550e-39	55.00	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S1XU45_9STRA	1.210e-33	58.56	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S1U9K7_9STRA	4.780e-33	58.18	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
UPI00055EA9F4	3.820e-16	43.02	glutaredoxin 3 n=1 Tax=Methylocapsa aurea TaxID=66...	[more]
A0A4S8KT64_DENBC	8.190e-15	43.14	Glutaredoxin n=1 Tax=Dendrothele bispora (strain C...	[more]
UPI000F02BCA2	2.080e-14	42.86	glutaredoxin 3 n=1 Tax=Brevundimonas lutea TaxID=2...	[more]
A0A0S7ESE5_9TELE	6.090e-14	46.67	GLRX1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 176..189 score: 40.48 coord: 116..134 score: 47.81 coord: 162..175 score: 44.05
None	No IPR available	GENE3D	3.40.30.10		coord: 103..204 e-value: 9.2E-24 score: 85.3
None	No IPR available	PANTHER	PTHR46679	FAMILY NOT NAMED	coord: 103..204
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..218
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..51
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..30
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 31..43
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 44..51
None	No IPR available	TMHMM	TMhelix		coord: 21..43
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 116..179 e-value: 7.1E-12 score: 45.4
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 104..205 score: 19.049
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 118..134
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 111..199

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig13680	contig	H-paniculata_contig13680:1538..4924 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig13680.2266.1	mRNA_H-paniculata_contig13680.2266.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig13680 1230..6080 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig13680.2266.1 ID=prot_H-paniculata_contig13680.2266.1|Name=mRNA_H-paniculata_contig13680.2266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MIKTGNNSQSQSPPRRLRRSRAMVSSHISYAFSTVLLALLASLPSSNAFL
AASPATATRALCRSSIRQTGLTAAGNRIVLPGTKVVRSVGMIRNRNSIAL
DMSAEAAVDVEQKGIVTVYYKETCPYCKKALALLEGDYKLNVSRVNVLEG
DDSEKKIKQMKTFSGRNTVPQIFFNSLHIGGNDDVQKLHKDGKLSEMVAT
VRAEPAGMMKDSWYHPWY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014025	Glutaredoxin_subgr
IPR002109	Glutaredoxin
IPR011767	GLR_AS
IPR036249	Thioredoxin-like_sf