mRNA_H-paniculata_contig13513.2177.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: D8LTK4_ECTSI (Caffeoyl-CoA O-Methyltransferase (N-terminal region) Caffeoyl-CoA O-Methyltransferase (C-terminal r) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK4_ECTSI) HSP 1 Score: 132 bits (332), Expect = 2.590e-36 Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALE-AEDVYGPETEPRNVPTTRGANAAS------DVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWKDGSYP 342 +RYWDY EK L+ PRPLL+PTG+LLADNVLFH+LVPLAEA+ A G E P P G A + T RR KIA+SL+ FN+RV ED RV+ LMLP+RDGLSVVRW+ G YP Sbjct: 106 KRYWDYLEKVLSGPRPLLAPTGLLLADNVLFHELVPLAEAMATATTGEGEEISP---PAMGGEGARAVGAGVLAPTSRRMKIAESLDRFNKRVKEDGRVEVLMLPLRDGLSVVRWRAGGYP 223
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A6H5KFJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ8_9PHAE) HSP 1 Score: 131 bits (329), Expect = 3.450e-34 Identity = 67/118 (56.78%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEAL-EAEDVYGPETEPRNVPTTRGANAASDV---TPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWKDGSYP 342 +RYWDY+EK L+ PRPLL+PTG+LLADNVLFH+LVP AEA+ A G E P ++ + V TPRR KIA+SL+ FN+RV ED RV+ LMLP+RDGLSVVRW+ +P Sbjct: 286 KRYWDYFEKVLSGPRPLLAPTGLLLADNVLFHELVPFAEAMGTATTREGEEISPPSMGGEGARAIGAGVLAPTPRRMKIAESLDRFNKRVKEDGRVEVLMLPLRDGLSVVRWRARGFP 403
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A7S4DMY4_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DMY4_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 2.710e-12 Identity = 42/110 (38.18%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVP-LAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 + Y YYE LA + L+ G+++ DNVLF +V +A+ EA+ P + P + PT+R R KIA++L++FN VA D+R ++++LPIRDGL+++R K Sbjct: 191 KMYLRYYEAILA--KKLIKTGGLIIVDNVLFRGMVAEVADETEADAAAIPSS-PSSSPTSR----EEKTRKRHLKIAQALHEFNSAVAADERTESVLLPIRDGLTIIRRK 293
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A7J7IJY6_9RHOD (Rhodanese domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJY6_9RHOD) HSP 1 Score: 67.4 bits (163), Expect = 1.180e-10 Identity = 40/108 (37.04%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRW 324 R+Y YYE L R LL+P G LL DNVLF L + EDV + A + R K+ +++++FN+ V ED RV ++LPIRDG+S+++W Sbjct: 682 RQYIAYYEFILE--RRLLAPHGALLVDNVLFRPLYGKQRHADLEDV-------------ELGDRAERIALRSTKLMQAVHEFNKHVQEDARVTQVILPIRDGVSIIQW 774
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: M1VM75_CYAM1 (Rhodanese domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VM75_CYAM1) HSP 1 Score: 64.7 bits (156), Expect = 1.040e-9 Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 RRY Y++ L LLSP G LL DNVLF + + + EDV E A + R K+ +++ FN+ V ED RV ++LPIRDGLS+++W+ Sbjct: 679 RRYITYFDFIL--DHRLLSPNGALLVDNVLFRPVYGKQKHAQMEDVEFGEH-------------AERIALRSRKLMDAVHAFNQHVLEDARVTQVILPIRDGLSIIQWR 772
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A7S1U1X2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1X2_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 3.320e-9 Identity = 36/109 (33.03%), Postives = 53/109 (48.62%), Query Frame = 1 Query: 1 RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 R Y DY + PLL P ++ DN LF LVP E P P+ + R KIA++++ FN VA +DR + +LP+RDGL+++R+K Sbjct: 157 RSYRDYLDMVT----PLLRPNALVFVDNTLFRGLVPFVPDGELPQETNPNPNPK-------------LRARHEKIAEAMHAFNAAVAANDRFEQAILPLRDGLNIIRFK 248
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A7S1FKH6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKH6_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 8.150e-9 Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 4 RYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEA-LEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 R DY E ALA +L+P G ++ DNVL+ V + +E E+V +PR A ++ R K+A +++ FN V ED R++ ++LP+RDGLS++R K Sbjct: 31 RMLDYVE-ALARDDRILAPGGTIVVDNVLWKGGVLNQQGGMEKEEVEEEGADPR----------ARKLSRRAKKLAGAMHRFNAAVVEDKRLEVVLLPLRDGLSIIRKK 128
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A8H7Q3G7_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q3G7_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 1.820e-7 Identity = 36/107 (33.64%), Postives = 60/107 (56.07%), Query Frame = 1 Query: 7 YWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 Y +Y+ + ++ R LLS G++L DNVLF LVP +A+E+E +P+N R A+ L+ FN+ + +D RV+ ++LP+ DGLS+++ K Sbjct: 172 YINYFNQIMS--RSLLSDRGVILVDNVLFRGLVP--QAMESE------IDPQNKGLMR--------------TARQLHAFNQHIKDDPRVEQIILPLYDGLSIIQKK 254
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A448ZGU7_9STRA (Rhodanese domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGU7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 2.080e-7 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 4 RYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVRWK 327 R +Y E L + R LL+ G+++ DNVL+ LV EA E V + E R A K+A +++ FN +A DDRV+ L+LP+RDGLSV+R K Sbjct: 866 RLLEYVEACLKSDR-LLNRGGLIVVDNVLWKGLV--LEASTGEFVSVSDREDSEKAELRKNRRAR-------KLATTMHRFNSAIAGDDRVEVLVLPMRDGLSVIRKK 963
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Match: A0A7S4W7P8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W7P8_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.620e-7 Identity = 36/108 (33.33%), Postives = 56/108 (51.85%), Query Frame = 1 Query: 4 RYWDYYEKALAAPRPLLSPTGILLADNVLFHDLV--PLAEALEAEDVYGPETEPRNVPTTRGANAASDVTPRRWKIAKSLNDFNRRVAEDDRVQALMLPIRDGLSVVR 321 R DY E + + R +L G+++ DNVL+ LV A+ ED+ E N + A K+A ++ FN + +DDRV+ ++LPIRDGLS++R Sbjct: 361 RLLDYVEACVGSDR-VLKKGGLIIVDNVLWKGLVLESAGGAMTKEDIDESEKNMDNTEVKKSRRAR--------KLAGKMHIFNSAIVKDDRVEVVVLPIRDGLSIIR 459 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13513.2177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13513.2177.1 >prot_H-paniculata_contig13513.2177.1 ID=prot_H-paniculata_contig13513.2177.1|Name=mRNA_H-paniculata_contig13513.2177.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp RRYWDYYEKALAAPRPLLSPTGILLADNVLFHDLVPLAEALEAEDVYGPEback to top mRNA from alignment at H-paniculata_contig13513:238..645+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13513.2177.1 ID=mRNA_H-paniculata_contig13513.2177.1|Name=mRNA_H-paniculata_contig13513.2177.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=408bp|location=Sequence derived from alignment at H-paniculata_contig13513:238..645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13513:238..645+ >mRNA_H-paniculata_contig13513.2177.1 ID=mRNA_H-paniculata_contig13513.2177.1|Name=mRNA_H-paniculata_contig13513.2177.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at H-paniculata_contig13513:238..645+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |