prot_H-paniculata_contig1338.2113.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1338.2113.1
Unique Nameprot_H-paniculata_contig1338.2113.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length445
Homology
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 9.280e-24
Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 0
Query:   13 VGGVGLREGDEELAKGGGCDEEEVICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVVEPPARSGRPKSSSSANDLINSANGGVSGAGPAGRLSSRNVRFWLRLH 129
            VGG G  +G E  A G G  EEE  CAICLCEEE+GQ LRVLPCGHFFHAGCVD+WL++SPTCPFCKQ VEPP       S+ S   L+ S+            +  R++R WLR H
Sbjct:  132 VGGPG--KGTEPAAAGEGV-EEEATCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPP-------STESKAGLVGSS-----------AVPVRSLRRWLRNH 227          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.020e-23
Identity = 67/128 (52.34%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    6 GGRVDGEVG-GV-GLREGDEELAKGGGCDEEEVICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVVEPPARSGRPKSSSSANDLINSANGGVSGAGPAGRLSS--RNVRFWLRLH 129
            GG +D E G GV G  +G E    G G  EEE +CAICLCEEE+GQ LRVLPCGHFFHAGCVD+WL++SPTCPFCKQ VEPP+   +                     GP G  ++  R+VR WLR H
Sbjct:  323 GGDMDVEKGWGVSGPGKGTEPAVAGEGV-EEEAMCAICLCEEEDGQDLRVLPCGHFFHAGCVDVWLAQSPTCPFCKQPVEPPSTESK--------------------VGPLGSSAAPFRSVRRWLRNH 429          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A4Y1RQH7_PRUDU (RING-type E3 ubiquitin transferase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RQH7_PRUDU)

HSP 1 Score: 72.8 bits (177), Expect = 6.220e-12
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   37 ICAICLCEEEEGQALRVLP-CGHFFHAGCVDIWLSRSPTCPFCKQVVEPP 85
            ICA+CLCE ++G+A+RVLP C H FHA C+D+WLS    CP C+  +EPP
Sbjct:   58 ICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPP 107          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A6P5SY84_PRUAV (RING-type E3 ubiquitin transferase n=3 Tax=Prunus TaxID=3754 RepID=A0A6P5SY84_PRUAV)

HSP 1 Score: 72.8 bits (177), Expect = 1.290e-11
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   37 ICAICLCEEEEGQALRVLP-CGHFFHAGCVDIWLSRSPTCPFCKQVVEPP 85
            ICA+CLCE ++G+A+RVLP C H FHA C+D+WLS    CP C+  +EPP
Sbjct:   88 ICAVCLCEFKDGEAIRVLPACMHLFHAECIDMWLSSHSNCPLCRTDIEPP 137          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A5E4F3R2_PRUDU (RING-type E3 ubiquitin transferase n=2 Tax=Prunus TaxID=3754 RepID=A0A5E4F3R2_PRUDU)

HSP 1 Score: 72.8 bits (177), Expect = 1.290e-11
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   37 ICAICLCEEEEGQALRVLP-CGHFFHAGCVDIWLSRSPTCPFCKQVVEPP 85
            ICA+CLCE ++G+A+RVLP C H FHA C+D+WLS    CP C+  +EPP
Sbjct:   88 ICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPP 137          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A251NVP6_PRUPE (RING-type E3 ubiquitin transferase n=4 Tax=Prunus TaxID=3754 RepID=A0A251NVP6_PRUPE)

HSP 1 Score: 72.8 bits (177), Expect = 1.350e-11
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:   37 ICAICLCEEEEGQALRVLP-CGHFFHAGCVDIWLSRSPTCPFCKQVVEPP 85
            ICA+CLCE ++G+A+RVLP C H FHA C+D+WLS    CP C+  +EPP
Sbjct:   90 ICAVCLCEFKDGEAIRVLPECMHLFHAECIDMWLSSHSNCPLCRTDIEPP 139          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A5J4YP56_PORPP (E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP56_PORPP)

HSP 1 Score: 73.9 bits (180), Expect = 1.180e-10
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:   33 EEEVICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVV 82
            +E+ +CAICLCE E  + LRVLPC H FH+ CVD WL RS  CP CKQ +
Sbjct:  243 DEDCLCAICLCEYEPDEKLRVLPCNHVFHSTCVDTWLGRSRQCPVCKQEI 292          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A1Y1VZL6_9FUNG (RING-type domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VZL6_9FUNG)

HSP 1 Score: 73.6 bits (179), Expect = 1.500e-10
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   37 ICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVVEPPARS 88
            +CAICLCE E G  LR+LPCGH  H  CVD WL  + TCP CK+V  P A S
Sbjct:  283 MCAICLCEYENGDVLRLLPCGHHMHQSCVDEWLHINRTCPLCKRVATPGAES 334          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: A0A2G5BKA4_COERN (RING-type domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKA4_COERN)

HSP 1 Score: 73.2 bits (178), Expect = 1.570e-10
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   31 CDEEEVICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVV 82
            CD E+ +CAICLCE ++G  LR+LPC H  H  CVD WL  + +CP CK+VV
Sbjct:  250 CDPEDNVCAICLCEYDDGDILRLLPCNHHLHQKCVDEWLHINQSCPLCKRVV 301          
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Match: R7TSL4_CAPTE (RING-type domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TSL4_CAPTE)

HSP 1 Score: 66.6 bits (161), Expect = 1.830e-10
Identity = 25/46 (54.35%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   34 EEVICAICLCEEEEGQALRVLPCGHFFHAGCVDIWLSRSPTCPFCK 79
            +++ C +C+CE E+ Q LRVLPC H FHA CVD WL  + TCP C+
Sbjct:   16 DQISCVVCMCEFEQRQLLRVLPCSHEFHAKCVDKWLKSNRTCPICR 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1338.2113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6J3_ECTSI9.280e-2454.70Similar to ring finger protein 167 isoform 1 n=1 T... [more]
A0A6H5JXB7_9PHAE1.020e-2352.34RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A4Y1RQH7_PRUDU6.220e-1258.00RING-type E3 ubiquitin transferase n=1 Tax=Prunus ... [more]
A0A6P5SY84_PRUAV1.290e-1158.00RING-type E3 ubiquitin transferase n=3 Tax=Prunus ... [more]
A0A5E4F3R2_PRUDU1.290e-1158.00RING-type E3 ubiquitin transferase n=2 Tax=Prunus ... [more]
A0A251NVP6_PRUPE1.350e-1158.00RING-type E3 ubiquitin transferase n=4 Tax=Prunus ... [more]
A0A5J4YP56_PORPP1.180e-1060.00E3 ubiquitin protein ligase RIE1 n=1 Tax=Porphyrid... [more]
A0A1Y1VZL6_9FUNG1.500e-1059.62RING-type domain-containing protein n=1 Tax=Linder... [more]
A0A2G5BKA4_COERN1.570e-1055.77RING-type domain-containing protein n=1 Tax=Coeman... [more]
R7TSL4_CAPTE1.830e-1054.35RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 38..78
e-value: 3.2E-8
score: 43.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 38..79
e-value: 1.4E-11
score: 44.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 38..79
score: 12.519
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 37..79
e-value: 0.0038
score: 10.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 23..85
e-value: 4.9E-17
score: 62.9
NoneNo IPR availablePANTHERPTHR45768FAMILY NOT NAMEDcoord: 35..96
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 33..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1338contigH-paniculata_contig1338:24137..25748 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1338.2113.1mRNA_H-paniculata_contig1338.2113.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1338 24049..25748 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1338.2113.1 ID=prot_H-paniculata_contig1338.2113.1|Name=mRNA_H-paniculata_contig1338.2113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp
MSAEDGGRVDGEVGGVGLREGDEELAKGGGCDEEEVICAICLCEEEEGQA
LRVLPCGHFFHAGCVDIWLSRSPTCPFCKQVVEPPARSGRPKSSSSANDL
INSANGGVSGAGPAGRLSSRNVRFWLRLHPLQNPADADAGATGGGGGGGG
SRVGDGAGAATAHQPVAVDTDAAADSGPGASEGGGGGFVRTVVAPAGTAA
NHEEGALLSGATSAGVAVAVVAAQAPTGTGGASGGASAAGRGANANAEEG
PLGAVLSDTLYIAFPGGAGVNARRSSTAVPAPPLSVGDGERAEVRRNSAG
FVGTATGAGVLRGAGAAVLASAPVRDSGERDVGGSGFPNGAAPLWSRFSR
PSSTGARAAAALPSDTRRFSSLHYDPFIGGASATAAPAAAAAAAAAAVGA
ASTVVVDVELEGTRGAGSSGSRVGGGVDEQKEEAGGAVTGVDGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD