prot_H-paniculata_contig1335.2094.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1335.2094.1
Unique Name	prot_H-paniculata_contig1335.2094.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	146

Homology

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BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6H5KGJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.620e-16
Identity = 43/108 (39.81%), Postives = 60/108 (55.56%), Query Frame = 0

Query:   19 KKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPK-GLKFHAIRTDNGGEFDGDFHLKLDKHGITYELTPPDT 125
            K T  RA     R+Y+DLG  M+   +G   Y ++I DD+SR+  + F+K KSDA    +  + DY T +   + +  RTD+GGEF G F     +HGI  E TPP T
Sbjct:  205 KSTSTRADKKLFRVYLDLGGKMKTRSIGDHWYTLMIRDDFSRWTRVFFLKHKSDAAVGFEKFLVDYRTKEVPCEVYITRTDDGGEFQGQFAEVFRRHGIKQEFTPPHT 312

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BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A8J5ESC8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5ESC8_ZINOF)

HSP 1 Score: 84.0 bits (206), Expect = 4.880e-16
Identity = 49/126 (38.89%), Postives = 69/126 (54.76%), Query Frame = 0

Query:    2 GACEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPK-GLKFHAIRTDNGGEFDGDFHLKLDK-HGITYELTPPDT 125
            G CEGC   K+HR      T  R T   ER++ DL  P + T     +Y+++ VDDYSRF  + F+K KS+ T ++  D    +  + G K   +RTDNGGEF  +  L   + +GI  EL+ PDT
Sbjct:  384 GVCEGCQFGKSHRLPFENSTS-RCTTPLERIHSDLMGPTKTTSYSEGNYMLLFVDDYSRFTWVYFVKHKSE-TFSIFLDFKKIVEGELGRKIKTLRTDNGGEFCSNEFLSFCRDNGIKRELSCPDT 507

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BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2KMT4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KMT4_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.270e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  476 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 597

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2JZV9_9BRAS (Integrase catalytic domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JZV9_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.270e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  162 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 283

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2KKQ4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KKQ4_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.280e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  476 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 597

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2KB33_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB33_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.360e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  476 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 597

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A8J5GTW8_ZINOF (Uncharacterized protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5GTW8_ZINOF)

HSP 1 Score: 82.0 bits (201), Expect = 2.370e-15
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0

Query:    2 GACEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPK-GLKFHAIRTDNGGEFDGDFHLKLDK-HGITYELTPPDT 125
            G CEGC   K+HR      T +  T   ER++ DL  P + T     +Y+++ VDDYSRF  + F+K KS+ T ++  D    +  + G K   +RTDNGGEF  +  L   + +GI  EL+ PDT
Sbjct:  700 GVCEGCQFGKSHRLPFQNSTSRCMT-PLERIHSDLMGPTKTTSYSEGNYMLLFVDDYSRFTWVYFVKHKSE-TFSIFLDFKKIVEGELGRKIKTLRTDNGGEFCSNEFLSFCRDNGIKRELSCPDT 823

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2JWG0_9BRAS (Uncharacterized protein n=10 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JWG0_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.400e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  476 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 597

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6D2KB39_9BRAS (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2KB39_9BRAS)

HSP 1 Score: 82.0 bits (201), Expect = 2.450e-15
Identity = 46/123 (37.40%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    4 CEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNGGEF-DGDFHLKLDKHGITYELTPPDT 125
            CEGC   K+HR      T  R     ER++ DL  P R +   G  Y+++ VDDYSR+  + F+K+KS+  +  Q          G K   +RTDNGGEF   +F     KHGI  E + P T
Sbjct:  750 CEGCQYGKSHRLPFDNSTS-RCNAPLERIHSDLMGPTRTSSYSGFRYMLLFVDDYSRYTWVYFVKEKSEVFSKFQEFKVTVEGELGRKIKTLRTDNGGEFMSNEFLSFCRKHGIKREFSCPYT 871

[Close]

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Match: A0A6H5K2T3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T3_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 4.940e-15
Identity = 46/109 (42.20%), Postives = 60/109 (55.05%), Query Frame = 0

Query:   19 KKTDKRATWAAERLYVDLGEPMRVTDLGGSSYVMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGL--KFHAIRTDNGGEFDGDFHLKLDKHGITYELTPPDT 125
            K T  RA     R+Y+DLG  M+   + G+ Y +II  D+SR+     +K KSDA    +  +ADY T KG+  K + +RTD GGEF G F      HGI  E TPP T
Sbjct:   11 KSTSTRAVNKLFRVYLDLGGKMKTRSIVGNWYTLIIRVDFSRWTRAFLLKHKSDAAVGFEKFLADYRT-KGVPCKVYIVRTDGGGEFQGQFAEVCRTHGIKQEFTPPHT 118

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1335.2094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KGJ8_9PHAE	3.620e-16	39.81	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A8J5ESC8_ZINOF	4.880e-16	38.89	Uncharacterized protein n=1 Tax=Zingiber officinal...	[more]
A0A6D2KMT4_9BRAS	2.270e-15	37.40	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A6D2JZV9_9BRAS	2.270e-15	37.40	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6D2KKQ4_9BRAS	2.280e-15	37.40	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A6D2KB33_9BRAS	2.360e-15	37.40	Uncharacterized protein n=1 Tax=Microthlaspi errat...	[more]
A0A8J5GTW8_ZINOF	2.370e-15	38.10	Uncharacterized protein n=1 Tax=Zingiber officinal...	[more]
A0A6D2JWG0_9BRAS	2.400e-15	37.40	Uncharacterized protein n=10 Tax=Coluteocarpeae Ta...	[more]
A0A6D2KB39_9BRAS	2.450e-15	37.40	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase n=...	[more]
A0A6H5K2T3_9PHAE	4.940e-15	42.20	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 29..127 e-value: 8.1E-10 score: 38.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 14..145 score: 10.671
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 18..129 e-value: 7.1E-11 score: 43.7
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 24..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1335	contig	H-paniculata_contig1335:8465..8902 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1335.2094.1	mRNA_H-paniculata_contig1335.2094.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1335 7578..11666 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1335.2094.1 ID=prot_H-paniculata_contig1335.2094.1|Name=mRNA_H-paniculata_contig1335.2094.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MGACEGCSTAKAHRFVLPKKTDKRATWAAERLYVDLGEPMRVTDLGGSSY
VMIIVDDYSRFQAIEFIKKKSDATAALQSDIADYITPKGLKFHAIRTDNG
GEFDGDFHLKLDKHGITYELTPPDTSHTIVLPKGGWVYCARKRLH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR012337	RNaseH-like_sf