mRNA_H-paniculata_contig13224.2022.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: D7FXN7_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN7_ECTSI) HSP 1 Score: 134 bits (336), Expect = 2.320e-33 Identity = 78/150 (52.00%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 67 APRQMSWVSATPRALEQRNRRENGRKSVGDPRTRTSPDAGDNKSGQVSVEDDADVFDILAQLFAFQRDSVRNQR-----------------DNAITLLASRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHLWTWQIKL 465
APRQ SW A P+ALE R RK + T P + S + + E+DADVFD L QLF FQRDSVRNQR DNAITLLASRL+RSV+ + LTP VA VL WR+EQLANYKKWC+H+W+WQIKL
Sbjct: 101 APRQTSWAQARPQALEHPQRSGRHRKGA---KGMTEPRMNKDGSRENTGENDADVFDFLTQLFGFQRDSVRNQRTRRLGGGRSWDSVRNERDNAITLLASRLSRSVNHAGSDLHSLTPDKVAYVLATWRKEQLANYKKWCKHIWSWQIKL 247
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: D7FPK0_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK0_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 4.690e-11 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 226 DVFDILAQLFAFQRDSVRNQRDNAITLLASRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
D FD+LA++F FQ+DSV NQRDNAI++LASRL+R+V G E +T VL +R E L+NY +WC L
Sbjct: 104 DAFDVLAKVFDFQQDSVLNQRDNAISMLASRLSRAV--GHELENQVTLQDAGLVLEAFRGELLSNYTRWCSFL 174
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: UPI0011D195A8 (callose synthase 10 isoform X5 n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D195A8) HSP 1 Score: 59.3 bits (142), Expect = 2.600e-7 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLAR-SVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
++S + DAD+FD+L +F FQ+D++RNQR+N + LA+ R S+ G+ E + V V ++ L NY KWCR+L
Sbjct: 255 EISGQRDADIFDLLEYVFGFQKDNIRNQRENIVLSLANAQTRLSIPVGTDPELKIDEKAVNEVFLK----VLDNYIKWCRYL 332
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: UPI0011D25ABE (callose synthase 10 isoform X4 n=2 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D25ABE) HSP 1 Score: 59.3 bits (142), Expect = 2.600e-7 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLAR-SVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
++S + DAD+FD+L +F FQ+D++RNQR+N + LA+ R S+ G+ E + V V ++ L NY KWCR+L
Sbjct: 255 EISGQRDADIFDLLEYVFGFQKDNIRNQRENIVLSLANAQTRLSIPVGTDPELKIDEKAVNEVFLK----VLDNYIKWCRYL 332
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: A0A6A5MD39_LUPAL (1,3-beta-glucan synthase n=3 Tax=Lupinus TaxID=3869 RepID=A0A6A5MD39_LUPAL) HSP 1 Score: 57.8 bits (138), Expect = 8.870e-7 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
+VS + DAD+FD+L +F FQ+D+VRNQR+N + ++A+ +R G E P I + + L NY KWCR+L
Sbjct: 258 EVSGQRDADMFDLLESVFGFQKDNVRNQRENVVLMIANAQSRL---GIPAEN--DPKIDEKTINDVFLKVLDNYSKWCRYL 333
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: A0A2G2ZVZ7_CAPAN (1,3-beta-glucan synthase n=3 Tax=Capsicum TaxID=4071 RepID=A0A2G2ZVZ7_CAPAN) HSP 1 Score: 57.0 bits (136), Expect = 1.590e-6 Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 208 SVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLARSVDRGSAQEGL-----LTPAIVANVLIQWRQEQLANYKKWCRHL 444
S + D D+FD+L +F FQ+D++RNQR+N I ++A+ AQ GL P I NV+ + + L NY KWCR+L
Sbjct: 259 SGQRDMDMFDLLEYVFGFQKDNIRNQRENVILIVAN----------AQSGLGIPVEADPKIDENVITEVFLKVLDNYIKWCRYL 332
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: UPI001FB0924E (callose synthase 10 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0924E) HSP 1 Score: 57.0 bits (136), Expect = 1.640e-6 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLA---SRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
Q S E D D+FD+L +F FQRD+VRNQR+N + +A SRL VD P I + + ++ L NY KWC++L
Sbjct: 258 QHSGERDVDMFDLLEYVFGFQRDNVRNQRENVVLTIANAQSRLGIPVDAD--------PKIDERAITEVFKKVLDNYIKWCKYL 333
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: A0A072V9X9_MEDTR (1,3-beta-glucan synthase n=3 Tax=Medicago truncatula TaxID=3880 RepID=A0A072V9X9_MEDTR) HSP 1 Score: 57.0 bits (136), Expect = 1.640e-6 Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
+VS + DAD+FD+L +F FQ+D+VRNQR+N + ++A+ +R A P I + + ++ L NY KWCR+L
Sbjct: 259 KVSGKRDADMFDLLEFVFGFQKDNVRNQRENVVLIIANTQSRLGIPAEAD-----PKIDEKTINEVFKKVLDNYIKWCRYL 334
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: A0A059CXX3_EUCGR (1,3-beta-glucan synthase n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CXX3_EUCGR) HSP 1 Score: 56.6 bits (135), Expect = 2.230e-6 Identity = 29/81 (35.80%), Postives = 46/81 (56.79%), Query Frame = 1
Query: 202 QVSVEDDADVFDILAQLFAFQRDSVRNQRDNAITLLASRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
++S + DAD+FD+L +F FQ+D++RNQR+N + LA+ +R + NV+ + L NY KWCR+L
Sbjct: 255 EISGQRDADIFDLLEYVFGFQKDNIRNQRENIVLALANAQSRLIISVEPDPDPKIDEKAVNVVFL---KALDNYIKWCRYL 332
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Match: A0A7I8JWY9_SPIIN (1,3-beta-glucan synthase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JWY9_SPIIN) HSP 1 Score: 56.2 bits (134), Expect = 3.030e-6 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 1
Query: 226 DVFDILAQLFAFQRDSVRNQRDNAITLLA---SRLARSVDRGSAQEGLLTPAIVANVLIQWRQEQLANYKKWCRHL 444
D+FD+L F FQ+D++RNQR+N + +LA SR VD P I V+++ + L NY KWCR+L
Sbjct: 255 DMFDLLEYAFGFQKDNIRNQRENVVLILANTQSRFGMPVDS--------EPKIDGKVIVEVFTKVLDNYAKWCRYL 322 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13224.2022.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig13224.2022.1 >prot_H-paniculata_contig13224.2022.1 ID=prot_H-paniculata_contig13224.2022.1|Name=mRNA_H-paniculata_contig13224.2022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=155bp RAARRSRSPGDASGDPTHGHGHAPRQMSWVSATPRALEQRNRRENGRKSVback to top mRNA from alignment at H-paniculata_contig13224:606..4442+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig13224.2022.1 ID=mRNA_H-paniculata_contig13224.2022.1|Name=mRNA_H-paniculata_contig13224.2022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3837bp|location=Sequence derived from alignment at H-paniculata_contig13224:606..4442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig13224:606..4442+ >mRNA_H-paniculata_contig13224.2022.1 ID=mRNA_H-paniculata_contig13224.2022.1|Name=mRNA_H-paniculata_contig13224.2022.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=930bp|location=Sequence derived from alignment at H-paniculata_contig13224:606..4442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |