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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1706 |
| Cds size | 1302 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig132.2004.1 >prot_H-paniculata_contig132.2004.1 ID=prot_H-paniculata_contig132.2004.1|Name=mRNA_H-paniculata_contig132.2004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=434bp
MTDSDMANTKEMFQAVNGKVTLLHEHLILVDKRVSKQEESGSDIIKKNSE
KLEKINDQISRMQRYQDEDHQTIKELTRQLRDTSSVVAALQNRIVALEAT
AAVSTSKKKNTSKRNSSPSASNGKTKGSSSGGGGGGSGSNSGYNRQKEGV
ERIAQLELERIGQLEVERIAQLGAERAAQLEVAGENTAGISLVSSPSGTL
LPESRNSEAESELIDVVGGKRKAPPGKSGASVITGVLSVASPTANGHVEN
DNNNGGGGEGSSTEDDGASMGGDIKRQIISSSTAESPVVGGGGGGAASFL
PPPPPPLPVAVEGQRLKEKQLSRRAWGGNFIQGLFVRMDEDATRDIANLG
THEAMMYEVTKDNPRLYRRKIQALFAQPSFREAVGFNRYKKDGHDIDAEG
VRSMFSKLVEDIRCMKETRFKYGGNHYDCYFFR* back to topmRNA from alignment at H-paniculata_contig132:29806..35050- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig132.2004.1 ID=mRNA_H-paniculata_contig132.2004.1|Name=mRNA_H-paniculata_contig132.2004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5245bp|location=Sequence derived from alignment at H-paniculata_contig132:29806..35050- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATAATGGACAAAACAGTTTCGTTCTGAGTCCTACGTACGTCTCGTTTT
GGAAAACGCAAGCCCTATATAACTCCCTAAACGCGGGTTTTTCGTCTCGA
GTTGGATTTGGCACTCCTTTGCTGTAACAACCTGCAGCGGATGAGCGGCA
GGCGAACGTATCCGGTTGCTCTCCTTCTCAACCCGTCGCGATTTGACGTG
TCATTATTCAGCCGTACAGCAAACCACTCCGACGGATTCCCGGTGAATGT
GAGTTTGTGATGTTGTATCTGTACGTTACCAAGGCCCGGCCCGCTGCGTG
ATCCGGGCGTTCGGTACCCACCCGATCTATCAATCCAGCACACCTGTGTT
CCTGTACCCAACCGTGGATTGTCGCGGGTCTCTGCTATACTCGTGTTGGT
GCAAGAGAGTAGACGTTGCAGCGATTTTGTGAATTTGATTATAGTGTGCT
CATTGCGCGGGGGTGACTCCGGCTTAGTAGGACAGGAAGAGGAAAAAATT
CCGCCGTCATGATTTTTAGGTCGGAGACCTGAGTTGTGCTGTGTGCACGA
CTGTACTCTGTACTCTGTTATTGAGTATTTTATGTACATGATGTAGACTT
GTTCGCTGCTGACTGGTGTGACTAAATAGCTATTTCCTACAAGCGTCGTG
TACTTTTTACGCGCAAATAGTCACGTGTCACTGCGTAACGTCTAGGTAAC
GGTCTTGATCTTGCCTGTAGAAGTCGCAAATATTTCGTCTGCTGGCTGCT
ACATCCGTGTTTTATGTTTAAATGTTGCCGCAGTAATCTATATTTAGGTA
CTCCCTCTGTCCTCTAAGTCTGGTGAAAAATAGTCGTATATTTTCAATAA
TATAGCTTCTACGATTTTCAAAATCATCGAAAACTAGGCACACCGTTCGA
AAGTCCTGAGTTTCCTCCCTCTGCTAGATATCTCCAAAACATGTTCTCAA
TACAAAGTGGTTTAGAAACTATCTGCAGAAAGAACATGGTTGATGCTTTT
CGGGAAAGGCGAATTGGGAAAAATATCGACAAAAATCAGCCAAGCACGTG
GAATGGCGCTTGTGCGACGACAACTTTGCATCGAGACCTCCGGTGATGAA
CCGGATTGTTGCGCTGGCTTCTTGGGCAAAAGGTGGATTAAAATCGCTCC
TTGTCCCAGCGCGGGACACTTCCAATTCTCAGTATCACATCATCAATCGA
GGGTAGCATGAAACAAGTGTGGGTCAATTTTGACACGAACAACTAAAACG
CTCGTCTTTTGCTTCTTCTTCTCGATTTCGTGAAGTGGACGAGGGCAATA
AGGATTGATGAATGATATCAACATTATATTTAGTCCAAATATTGCCGAGG
AATCCAACGCAACAAAAGGTTTCTTAATCCAAGGTCTTGTTGTAGCGTTG
TAACCTTATCGCCGCATAGGTGCAATTCCACGTACTTGGGTCAATTTTTT
TGTATACTTTTTCCCAATTCGCCCTTTCCGAAAATCACCGACCATGTTGA
GTCGACAGTTTCTCGACCAGTTCGCCTTGAAAAAATGTTTTGGAGATTGG
TAATTCTCATAACTGTAAAAGATATTCCGAAAAATACCAAGAGTTACCCG
GCTTTCGGGATAGAGGGAGTCCCGTTTGGCAGTTTCTGTATATTCCGTGA
ACTTGAGTTTTCGCGCTTCTCGCCTTCGCCTCTCGCGTTCGATAGTGCTT
TGTACGCCCCAGTATTTACCCTGTTTCATGCTTCGTGTGGTATAATAGGC
ATTTCGCTTACTATTTGTGTGTATCACCTTCTGAAGTGTTTCCGTCTGAC
CCTTATTATTATATTAATTTTCCGCCTATAGATGCCATCCTACGTACGTA
CGCAGAATGATGCGAAAGATCTCGTTGTTGAATCAGCTGTTTGCCCTGGA
TCGAGGATCTTCACCCGCATATCAGTCGCTCGAACTACACTATTCGGAGA
TTATTCGCAACTGCGAACATAGTTGCAAGTGTATATTCCCTGCGCGTAGA
GAGAGAATGAAGGACTGGTTAGCTTTGTCGTATGGTGCTACTTTGGGAAA
GCAAGTCGGGTAGGCTCAAATTATCATGACTACCTCGCGATCGGGTTGCG
ATCTTGCTGTGATTTTTATTCGTGCAGTATGCGTCCTTCTGTTCAACATG
GATCGAAGTTCCCCGACAGTACGAGGCCCCACTTGCATCCCCCCAAGGCG
TGGGCCGGTGCGTTCAGCATGGTCGTCTTTCTAATCACTACCCAAGCCCC
CGGCGGGGTCCATATGTTTTTGTTTCATGTGTAGTAGATCCCCGTAGGTG
CCGAAAATTCCCGTCAACGGAATGAAAATATCCCACCTCTCTCCTCCTTC
CCCGTTTGGCAAGACTTTTTACATGATCGGACATTACACACGTATTTTTT
ACGCGCTCATGTCATGAACCGGTCGCGGATGATCATATGAGAATTTTCCC
CGTTGACAGATGGTCATGTGAACCTGAGCCTTTCCATTTTGCCTCCCGGT
TGGCAGAAGGTCATCTGGGAATTTCAGGATTCTAGTGCCGGTTCTGTGGA
GTATGGCAGAACATTATTTGTGTACGATGGAAGATCGCCGACCTTCACCT
GGTTGTCACCGCCGATTTCAGAGCACTCTCAAGCTATTCTACATCTACGT
CACCTACTTCTCAGTGCAGAATTTATTCTGACAAACAAGCTCCAATGCAA
AACTCACGATTGTAGCATGAGCATGCAAGTCCTCGGCGACCACCTGCTCT
CTCTCTCTTTCTCTTTCTTTTTCTCTCTCACACACAGCAATACAGACAGG
TAGTGCAACCATCGTTACCAGGGTGACAGCGCGGGTCGTAGGTGCCGCGA
TGGTAACCAATTGTTCGTCTCACGAAGCATCAACGCCCAAAACATAAGGT
GTCTCCGTTGCCATCGATAAGCCTAACAAACGCGCAAAGTCGTGCATGAT
TTCGATGAATAGCACACAGCAATTGCGCGACCGCAGGTGGGTCATGAAAG
GGCCAGAGGAAAAGAATGGGTATCTCGGCGCAGGGATGCCTATGCATAAT
GATCCCGACAGGCGGCAGCAGTGCGTACAGCTCACAGTGACAAACAAGAT
TGTTCACCACGTGACAACTTCCTGGTGCTTCAGGCTTTGGGTTGATTTTG
ATATTGCAATTTTTATACGTAACCAGGATGCTACGCATGACCGGCATTTT
TACATGTCATAAACCGGTTCGCGGTTGGTCATGTGAGAGTTTCGCCCGTC
TCACGGATGGCCATGTGAAAATTTCGAGGACGGTCGATGTGAAAAATCTT
CCCGGCTCGCGGTCGGTCATGAGAACTTGCCGCTCATATGAGAAGGCTTG
CTCTTGAGAAGGATTTTTCTCCCTTCCGATATTTGGTAGTGGTAATAAAT
ACACGTTGCTTGAAATGAAAGCTACATACGCTCAGCTTGACACGAATATG
CGATATAGAAAATCGCAAGTGAAGAGCCAGGTGAACTACTGTTTACGGCT
CTTGCTATTTTCATTATTAATTGGAGGATTATGAGCCGTATACATGCGTC
TTACAGTGGTACTCTGTTTCAAATGCATATTCCGCTAGCTGTGTCCTAGG
TGGAGTGTAGGTCGAGGTACTTGATTTTATGCGGGATGAGTGGTTACCTC
CCCACCCACCGCCACCCCGCCTGGCATGCAATACATAAATTTCCCCCCCC
CGTCCCCTCCCCTCCCCGCGGGTAACCTGGTTTCACTCTTTCTAAAACCA
CAAGTCTCCCATGCCTTGCTATTTTCCCCCAACTCAGCCACGGACGCGAT
CATGACCGATTCGGATATGGCGAATACGAAAGAGATGTTTCAAGCCGTGA
ATGGTAAGGTGACGCTGTTGCACGAGCACCTCATCCTCGTAGACAAGCGG
GTGTCTAAGCAGGAGGAATCCGGTTCGGACATAATCAAGAAAAACTCTGA
GAAGCTGGAGAAGATTAATGATCAAATTTCCCGCATGCAGAGGTACCAAG
ACGAAGACCACCAGACAATCAAAGAGCTCACTCGCCAGCTTAGGGACACA
TCGTCCGTCGTTGCTGCTTTGCAGAACCGGATAGTCGCGCTGGAGGCGAC
AGCAGCGGTATCGACCTCGAAGAAAAAAAACACTTCAAAGAGGAACAGCA
GCCCCTCCGCGAGCAACGGCAAAACTAAAGGCAGCAGCAGTGGCGGCGGC
GGAGGAGGCAGCGGCAGCAACAGTGGTTACAACAGACAGAAAGAAGGAGT
GGAGCGTATTGCACAATTGGAGCTGGAGCGAATCGGTCAGCTGGAGGTGG
AGCGTATAGCGCAGTTGGGGGCCGAGCGCGCGGCCCAACTCGAAGTAGCA
GGAGAAAACACCGCAGGCATCAGTCTTGTCTCCAGTCCGTCCGGAACACT
GCTGCCTGAGTCACGAAACAGCGAGGCGGAGTCAGAGCTCATCGATGTTG
TCGGAGGAAAGCGCAAAGCACCGCCAGGGAAATCAGGGGCGAGCGTGATA
ACAGGGGTGCTCTCGGTTGCATCTCCAACTGCTAACGGTCATGTAGAGAA
TGACAATAACAACGGCGGCGGCGGGGAAGGGAGCAGCACGGAGGATGACG
GGGCTTCTATGGGGGGCGATATCAAGCGCCAGATCATTTCGAGCTCAACA
GCAGAGAGTCCCGTGGTGGGCGGCGGGGGTGGGGGCGCGGCGAGCTTTCT
GCCGCCGCCACCCCCGCCACTACCGGTTGCAGTGGAGGGGCAGAGACTGA
AAGAAAAGCAACTAAGTAGGAGAGCTTGGGGGGGTAACTTCATCCAAGGG
TTATTTGTCAGGATGGACGAGGATGCTACCCGCGATATCGCGAATCTGGG
CACTCACGAGGCGATGATGTACGAGGTCACCAAGGACAATCCGCGTTTGT
ACAGGCGGAAGATACAGGCTCTGTTTGCGCAGCCGTCGTTTCGAGAGGCC
GTTGGGTTCAATCGGTACAAGAAAGATGGGCATGACATAGACGCGGAGGG
GGTGAGGTCCATGTTTTCGAAGCTGGTGGAGGATATCCGCTGCATGAAGG
AGACTCGCTTCAAATATGGTGGCAACCACTATGATTGCTACTTTTTCCGG
TAAAGGCTTCGATCGTTTTTTTTCAATAGGTATTTTTATACAAGTCGTGG
TTTGCGTGTGTGGATGTGTGGGTGTGTGTGTGTGTCCGTTTTGTTTGTTT
TGTGTGGTGTGTTCTGTAGTTGTGTTCGAACAGGAGTTAGCAGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig132:29806..35050- >mRNA_H-paniculata_contig132.2004.1 ID=mRNA_H-paniculata_contig132.2004.1|Name=mRNA_H-paniculata_contig132.2004.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2604bp|location=Sequence derived from alignment at H-paniculata_contig132:29806..35050- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCGATTCGGATATGGCGAATACGAAAGAGATGTTTCAAGCCGTGAA
TGGTAAGGTGACGCTGTTGCACGAGCACCTCATCCTCGTAGACAAGCGGG
TGTCTAAGCAGGAGGAATCCGGTTCGGACATAATCAAGAAAAACTCTGAG
AAGCTGGAGAAGATTAATGATCAAATTTCCCGCATGCAGAGGTACCAAGA
CGAAGACCACCAGACAATCAAAGAGCTCACTCGCCAGCTTAGGGACACAT
CGTCCGTCGTTGCTGCTTTGCAGAACCGGATAGTCGCGCTGGAGGCGACA
GCAGCGGTATCGACCTCGAAGAAAAAAAACACTTCAAAGAGGAACAGCAG
CCCCTCCGCGAGCAACGGCAAAACTAAAGGCAGCAGCAGTGGCGGCGGCG
GAGGAGGCAGCGGCAGCAACAGTGGTTACAACAGACAGAAAGAAGGAGTG
GAGCGTATTGCACAATTGGAGCTGGAGCGAATCGGTCAGCTGGAGGTGGA
GCGTATAGCGCAGTTGGGGGCCGAGCGCGCGGCCCAACTCGAAGTAGCAG
GAGAAAACACCGCAGGCATCAGTCTTGTCTCCAGTCCGTCCGGAACACTG
CTGCCTGAGTCACGAAACAGCGAGGCGGAGTCAGAGCTCATCGATGTTGT
CGGAGGAAAGCGCAAAGCACCGCCAGGGAAATCAGGGGCGAGCGTGATAA
CAGGGGTGCTCTCGGTTGCATCTCCAACTGCTAACGGTCATGTAGAGAAT
GACAATAACAACGGCGGCGGCGGGGAAGGGAGCAGCACGGAGGATGACGG
GGCTTCTATGGGGGGCGATATCAAGCGCCAGATCATTTCGAGCTCAACAG
CAGAGAGTCCCGTGGTGGGCGGCGGGGGTGGGGGCGCGGCGAGCTTTCTG
CCGCCGCCACCCCCGCCACTACCGGTTGCAGTGGAGGGGCAGAGACTGAA
AGAAAAGCAACTAAGTAGGAGAGCTTGGGGGGGTAACTTCATCCAAGGGT
TATTTGTCAGGATGGACGAGGATGCTACCCGCGATATCGCGAATCTGGGC
ACTCACGAGGCGATGATGTACGAGGTCACCAAGGACAATCCGCGTTTGTA
CAGGCGGAAGATACAGGCTCTGTTTGCGCAGCCGTCGTTTCGAGAGGCCG
TTGGGTTCAATCGGTACAAGAAAGATGGGCATGACATAGACGCGGAGGGG
GTGAGGTCCATGTTTTCGAAGCTGGTGGAGGATATCCGCTGCATGAAGGA
GACTCGCTTCAAATATGGTGGCAACCACTATGATTGCTACTTTTTCCGGT
AAATGACCGATTCGGATATGGCGAATACGAAAGAGATGTTTCAAGCCGTG
AATGGTAAGGTGACGCTGTTGCACGAGCACCTCATCCTCGTAGACAAGCG
GGTGTCTAAGCAGGAGGAATCCGGTTCGGACATAATCAAGAAAAACTCTG
AGAAGCTGGAGAAGATTAATGATCAAATTTCCCGCATGCAGAGGTACCAA
GACGAAGACCACCAGACAATCAAAGAGCTCACTCGCCAGCTTAGGGACAC
ATCGTCCGTCGTTGCTGCTTTGCAGAACCGGATAGTCGCGCTGGAGGCGA
CAGCAGCGGTATCGACCTCGAAGAAAAAAAACACTTCAAAGAGGAACAGC
AGCCCCTCCGCGAGCAACGGCAAAACTAAAGGCAGCAGCAGTGGCGGCGG
CGGAGGAGGCAGCGGCAGCAACAGTGGTTACAACAGACAGAAAGAAGGAG
TGGAGCGTATTGCACAATTGGAGCTGGAGCGAATCGGTCAGCTGGAGGTG
GAGCGTATAGCGCAGTTGGGGGCCGAGCGCGCGGCCCAACTCGAAGTAGC
AGGAGAAAACACCGCAGGCATCAGTCTTGTCTCCAGTCCGTCCGGAACAC
TGCTGCCTGAGTCACGAAACAGCGAGGCGGAGTCAGAGCTCATCGATGTT
GTCGGAGGAAAGCGCAAAGCACCGCCAGGGAAATCAGGGGCGAGCGTGAT
AACAGGGGTGCTCTCGGTTGCATCTCCAACTGCTAACGGTCATGTAGAGA
ATGACAATAACAACGGCGGCGGCGGGGAAGGGAGCAGCACGGAGGATGAC
GGGGCTTCTATGGGGGGCGATATCAAGCGCCAGATCATTTCGAGCTCAAC
AGCAGAGAGTCCCGTGGTGGGCGGCGGGGGTGGGGGCGCGGCGAGCTTTC
TGCCGCCGCCACCCCCGCCACTACCGGTTGCAGTGGAGGGGCAGAGACTG
AAAGAAAAGCAACTAAGTAGGAGAGCTTGGGGGGGTAACTTCATCCAAGG
GTTATTTGTCAGGATGGACGAGGATGCTACCCGCGATATCGCGAATCTGG
GCACTCACGAGGCGATGATGTACGAGGTCACCAAGGACAATCCGCGTTTG
TACAGGCGGAAGATACAGGCTCTGTTTGCGCAGCCGTCGTTTCGAGAGGC
CGTTGGGTTCAATCGGTACAAGAAAGATGGGCATGACATAGACGCGGAGG
GGGTGAGGTCCATGTTTTCGAAGCTGGTGGAGGATATCCGCTGCATGAAG
GAGACTCGCTTCAAATATGGTGGCAACCACTATGATTGCTACTTTTTCCG
GTAA back to top
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