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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 656 |
| Cds size | 654 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12996.1884.1 >prot_H-paniculata_contig12996.1884.1 ID=prot_H-paniculata_contig12996.1884.1|Name=mRNA_H-paniculata_contig12996.1884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MLPYPISSVVQGEGDAALRTSTPPKPARTSPPARTPPSSSSTTTTTNTTT
RQPPAAMKFSSLASSSLSLYTAARDSVHSTAGSVTPNPKMMASARVEDTS
ISPLALATRPAMTAPSTPTSRSTVAWGWGEVVQDAEPAPHSTGSAGLENY
STNKGPDSGTGGTGTGGGIAAETSAGAASTAAVSVDHKAMFRPTLIIEFA
EDSPAFRRNVEALESNVE back to topmRNA from alignment at H-paniculata_contig12996:1144..3741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12996.1884.1 ID=mRNA_H-paniculata_contig12996.1884.1|Name=mRNA_H-paniculata_contig12996.1884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2598bp|location=Sequence derived from alignment at H-paniculata_contig12996:1144..3741- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTACCTTATCCGATCTCGTCCGTGGTACAGGGAGAGGGCGATGCCGC
TCTTCGAACATCAACACCACCAAAACCAGCACGAACCTCACCACCAGCAC
GAACCCCACCATCGTCATCATCAACAACAACTACTACTAACACCACCACG
CGACAGCCACCAGCTGCAATGAAGTTCAGCTCGCTGGCGTCCAGCTCACT
GTCTCTCTACACGGCGGCGAGGGACAGTGTGCACTCGACGGCTGGTTCAG
GTGAGTTTTTTTTTTTTTTTTTTAAATCTTGCCAGGAGACGAAGGTAAAA
ACCAAAAACCCTTGCTGCTGATGGTTATATTATGAGGTCAAAGCTTTCCT
ATGCCACTTCTAGGCTGGCCGATACCCATCTCACACATTTGGAAGAATTC
ACGTACGTCATTATCAGCGTAAGCGTTTTCCGCAGGTAGGCAGGCCGATA
CACCTACGGTTAAAAGAACGGTAAGGTTTGGGGATTGAGTTGGGCTGTCA
CCTGACAAGGCGATATCGGTGGGTAGGAGATGGAGAAATGACCTGGAAAG
GCGAAGGCTTGAGGTTGATGGATGTGGTAAGATGGAGTTGTGCTTTCTTG
TTCAATTTCTCCGTAGTGAGACGTGGAGAAGAAGAAAGAGGGACGAGCTG
TCATCAGAAATCGCTCAGACGGGAACAAGATCCACCCTCTCGAGGACTTT
GTGCGTGGTCAACGGTTTAACAACTGCGGCATGGAAGACAGTACTACGTC
CCCTGCTTGTTGATTTGAGTCTACACATGCAGATTAAAGTCACCTATATA
ACCTCAACATGGGAACGATATATAGCTATTGTATGAGTTCACAGAACTTT
TAGTTGAACCAGCTGTACTGTGCCTGGAGCGTTGGAAGTGTTGACTTTAG
AGATGAACATTTCAGTGGGGGGTGAAAGATGGCAGTTATTTTTGAGGTGG
ATATCATTTGTTCATGTGAGCACCATTTCATCTTTACGCACAGTTCACAC
CTGGGTGATGCAGAAATACCCTCTTGTGAAGGCTATCTTGGCCCATGTCG
TGCTTGGTCGTATAGGTGCGAGAAGCCCTGGTACTCCGTCATTATGGGGT
CGAAACGTATTTAAGGTGAACATGATCATATCCATCTCCTAAGCAGCAAA
ATCCTAATATCCGTCATGACCGTTCGAATGAGAACATCTTTCCCCCCCCA
CGTCCACCTCACCGCACGCCCGCCCCCTTACGCTCTCTCCGGTTATTTTT
AGTGACACCAAATCCCAAGATGATGGCTAGCGCACGGGTCGAAGACACGT
CAATTTCTCCTCTAGCTCTTGCAACGCGCCCGGCTATGACGGCGCCCTCT
ACCCCCACGTCACGGAGTACAGTTGCTTGGGGCTGGGGAGAGGTGGTGCA
AGACGCGGAGCCTGCTCCTCACTCCACTGGGTATGTAAAATGGGAAAGTG
CTGATTGACGTGCCAATGACCAGTCATGGATAATGACGAGTATGCGTCGA
CAGAGTGCCTAACCATCGTAGCTAGTTAGCATAGACGTCAGGTGCCGAAT
AGGGGGTTGATTTTTTTTTTTTTTTCTCCTTTTGGGGCCATTTGCTCTTT
GGTTTGGTGTAGAGCGAGGACGGGCAAAGACGAGGTTTGTTTCGAAATGA
GCAAGAAATAAAAGAGCCCTAGTCAGCTAATTGGGGGCGTCTTCGGCCCT
TCAACGGTTATAAATAAGATGAAGAGCCGACGACGGACTTAAACGTTGGA
GTGAGCTCGTCAGATCCGTTGACTCAACATCCGTGTAAAGTGTAGGTGTT
ACTGAGAGAACACGACGTTCTAATGGTAAGGCTGGCTTCCGTGGATGCGA
TCTCCTGCTTTAGTTTCGGTGGGGATATCAGGGATGTAGTATGGAGCACA
CACCGCTGTGATCTGTTGTGAGAGAGACCTTTCCTAGGTTGGAGTACCCC
TCAGGGGTTTTGCCAGCTAGAGAGCTGGTCCGAGAATGGGCGGACCAGCT
AGGGGCCTTGTCCGAAAATGGGTGAACAAGCCTCCTCATGATGTGTAGGG
AACTGGGGTTAGGAATCCCAGAAATCTCAGGAATATGCTTTCCACATCTA
TTATGTGTTTCGTCTACGTCGCGGTTGAGTTCCTCCTATTGGAAGCTCCG
GTCTAGAGCTGGAAGTGCAGCTTGGTTCTTGCGTTCTACTATCGCGCGGT
GGGGGTACTGCAGTCTCTATCACGTCGTCAACGCTATGTGCATGTATTCT
GGTGTAGTTCAGATGGATGATGACCAATTTGTACAACAGGAACCTCGTAC
TCTCTCTTCAAAACATATCCGACAGAAACCATGTATATCTATATATTCTC
CGTCTCGTTGCCTGCATCGCAGATCAGCAGGACTGGAAAATTACAGTACC
AACAAGGGACCGGACAGCGGCACCGGTGGCACCGGGACCGGGGGAGGTAT
CGCTGCGGAGACATCAGCGGGGGCGGCATCGACGGCAGCTGTGAGCGTGG
ACCACAAGGCAATGTTCCGACCAACCCTCATCATTGAGTTCGCCGAGGAT
TCGCCCGCGTTTCGGCGAAACGTTGAGGCGCTGGAAAGTAACGTGGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig12996:1144..3741- >mRNA_H-paniculata_contig12996.1884.1 ID=mRNA_H-paniculata_contig12996.1884.1|Name=mRNA_H-paniculata_contig12996.1884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at H-paniculata_contig12996:1144..3741- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTACCTTATCCGATCTCGTCCGTGGTACAGGGAGAGGGCGATGCCGC
TCTTCGAACATCAACACCACCAAAACCAGCACGAACCTCACCACCAGCAC
GAACCCCACCATCGTCATCATCAACAACAACTACTACTAACACCACCACG
CGACAGCCACCAGCTGCAATGAAGTTCAGCTCGCTGGCGTCCAGCTCACT
GTCTCTCTACACGGCGGCGAGGGACAGTGTGCACTCGACGGCTGGTTCAG
ATGTTACCTTATCCGATCTCGTCCGTGGTACAGGGAGAGGGCGATGCCGC
TCTTCGAACATCAACACCACCAAAACCAGCACGAACCTCACCACCAGCAC
GAACCCCACCATCGTCATCATCAACAACAACTACTACTAACACCACCACG
CGACAGCCACCAGCTGCAATGAAGTTCAGCTCGCTGGCGTCCAGCTCACT
GTCTCTCTACACGGCGGCGAGGGACAGTGTGCACTCGACGGCTGGTTCAG
TGACACCAAATCCCAAGATGATGGCTAGCGCACGGGTCGAAGACACGTCA
ATTTCTCCTCTAGCTCTTGCAACGCGCCCGGCTATGACGGCGCCCTCTAC
CCCCACGTCACGGAGTACAGTTGCTTGGGGCTGGGGAGAGGTGGTGCAAG
ACGCGGAGCCTGCTCCTCACTCCACTGGTGACACCAAATCCCAAGATGAT
GGCTAGCGCACGGGTCGAAGACACGTCAATTTCTCCTCTAGCTCTTGCAA
CGCGCCCGGCTATGACGGCGCCCTCTACCCCCACGTCACGGAGTACAGTT
GCTTGGGGCTGGGGAGAGGTGGTGCAAGACGCGGAGCCTGCTCCTCACTC
CACTGGATCAGCAGGACTGGAAAATTACAGTACCAACAAGGGACCGGACA
GCGGCACCGGTGGCACCGGGACCGGGGGAGGTATCGCTGCGGAGACATCA
GCGGGGGCGGCATCGACGGCAGCTGTGAGCGTGGACCACAAGGCAATGTT
CCGACCAACCCTCATCATTGAGTTCGCCGAGGATTCGCCCGCGTTTCGGC
GAAACGTTGAGGCGCTGGAAAGTAACGTGGAAATCAGCAGGACTGGAAAA
TTACAGTACCAACAAGGGACCGGACAGCGGCACCGGTGGCACCGGGACCG
GGGGAGGTATCGCTGCGGAGACATCAGCGGGGGCGGCATCGACGGCAGCT
GTGAGCGTGGACCACAAGGCAATGTTCCGACCAACCCTCATCATTGAGTT
CGCCGAGGATTCGCCCGCGTTTCGGCGAAACGTTGAGGCGCTGGAAAGTA
ACGTGGAA back to top
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