mRNA_H-paniculata_contig1279.1748.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: A0A6H5LAN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN5_9PHAE) HSP 1 Score: 547 bits (1409), Expect = 6.310e-175 Identity = 403/890 (45.28%), Postives = 483/890 (54.27%), Query Frame = 1
Query: 43 KAREDRKRQLEEQEALRTLTASSEQEPI------------ARPKPPESSVEILMPMDQSPDEKTAMPPSSIGAER---RQPAQLGRRAICAFERTNALGSGNGETSGGGGGVAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEVGERFARSSLIFTGSGTQGIGFEHVPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGPQPIASRDTWKTVTSSEV-----------DADWDFPDPFVTSQALAAEMLSGMEVGKWE-GKGFSCPR----------------LLETPPPPEFFFSAADVHRHRFPMYEEGGATKRIPEAFDEIGPPTCFVDVPLLPLKEAEEGR-------------SMGYQIGPPPALGTYPTAEES-RMLRWSAFEECGVRQPRDENEPAAGGFAPDKNDGTGTPAKGSG----GGWRKDLTSGERRDSQ------ATLGRRRSSVGL--------RMLPTTEQNPDETWLAEAEAELTELAEEAEKVERLPDSLLFRSLAPGGVDLITPDPRYTVYMPEIEVDETSPAWCLRPKRIPREVPVTKGLLLGYSPGSTTLRAYANAPRLSSSWKPNRQRRSSGLSCMRGQATRGVWKPTGAYMSSIDTLVESRDFSDGGNG--GFRLA-------------PEATADARLPCDHDVYLTRKHAACAAAAATGDQLSDSESEDSEGGDNPPLTLAYARSFFDDTMNTSLCSA----SGNVGIDHATQDTGTNAGIDPDGVERVDKRTLLGNSDSGPRLLERDVAIALLERERKKMREKDAERLPDRLGAIAAE 2430
+ R +R+RQL+EQEALR+LT ++ EP R P + T P G ++ +QPAQLG RAICA+E T +G +G + AATRQLKEMSFLQDL TE+EER R+FKASVEH+GE LL++REV V EERR+ E+ L RRR ER SL TCLKGP EVG R AR+SL+FTG GTQGIGF H PDWDLYKNDDWG+RREVLRRLVNL+G WIVR R+GRRL IQ V AMVE DN +AKL++GP S+++WK V D W+FPD VTS+ALAAEML+ G+ G G S EF SA DV ++RFP+Y+EG A R E D +GPP+ FVD+ LLPLKE E R S G P L +P S R L +F QPRDE G D + G A +G GWR+ L++ ERR AT +++ + RM+P T N +E WL AEAELT LA EAEKV+R+PDSLL R P GVDLITPDPRY ++PE+ +DE SP WCLRP+ IP EVPVTKGLLLGYSPG+TTLRAYA APR SS WKP R+RRSSGL+CMRGQA+RGVW+P A D GNG G R+ EA A D+ L HA AAAA GD+LS SE P T A AR+ FDDT+ + A SG+ D G NA V + LG G + RD A A LE R+ R KDAERL DR+GAI AE
Sbjct: 434 RTRAERQRQLQEQEALRSLTLTASTEPTHDDGNGXXXXRSGRRDPSHPGGRQI----------TDTPEGERGLQQERLQQPAQLGGRAICAYEAT-VVGGDDGRSG------AATRQLKEMSFLQDLADTESEERERSFKASVEHVGEPLLSQREVERVLEERRRGEQALLRRRREKERESLQTCLKGPSEVGARCARASLLFTGEGTQGIGFRHKPDWDLYKNDDWGRRREVLRRLVNLVGAWIVRRRAGRRLGAIQ-----------VAAMVERDNYEAKLSAGPLAGTSQESWKPVADRGSFANENNDDGVDDGGWEFPDLLVTSEALAAEMLAESSAGRTAMGTGSSGTHGSXXXXXXXXQYTRHSAAXXXXXXEFQLSAEDVDQYRFPIYDEGAALSRREEVVDPVGPPSDFVDIDLLPLKEPEVRRRDLHSTPEKTPSSSDGMCSMP---LPVHPNNHISVRTLPRPSFN-----QPRDEEGEEEGDGESDLSAEFGRKASSNGVRSASGWRQGLSTTERRPMNTSTYPTATTTKKKKQIDTSNCRQTLGRMIPDTADNAEEAWLRAAEAELTALAAEAEKVDRMPDSLLLRPPPPDGVDLITPDPRYKGFLPELPIDEASPEWCLRPQEIPLEVPVTKGLLLGYSPGTTTLRAYAGAPRFSSFWKPKRERRSSGLACMRGQASRGVWQPARAPPPP----PRPNRRGDEGNGVQGTRVVGGVGSVLNRASPGDEAPAVRGRGGDNTFRLAADHATVAAAA--GDELSASEXXXXXXX-XPMPTPADARTVFDDTVAGRVGEAGRSLSGSSYTDPPLNSDGDNAAC-------VKREGSLGGDVGGRKGFARDRATAALEDARRTKRLKDAERLADRMGAIGAE 1273
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: D7FVH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH9_ECTSI) HSP 1 Score: 494 bits (1272), Expect = 1.380e-154 Identity = 349/781 (44.69%), Postives = 413/781 (52.88%), Query Frame = 1
Query: 235 QPAQLGRRAICAFERTNALGSGNGETSGGGGGVAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEVGERFARSSLIFTGSGTQGIGFEHVPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGPQPIASRDTWKTVTSSEVDAD-----------WDFPDPFVTSQALAAEMLS-GMEVGKWEGKGFSCPRLLETPPPP----------------EFFFSAADVHRHRFPMYEEGGATKRIPEAFDEIGPPTCFVDVPLLPLKEAEEGRSMGYQIGPPPALGTYPTAEESRMLRWSAFEECGVRQPRDENEPAAGGFAPDKNDGTGTPAKGSG----GGWRKDLTSGERRDSQATLGRRRSSVGLRMLPTTEQNPDETWLAEAEAELTELAEEAEKVERLPDSLLFRSLAPGGVDLITPDPRYTVYMPEIEVDETSPAWCLRPKRIPREVPVTKGLLLGYSPGSTTLRAYANAPRLSSSWKPNRQRRSSGLSCMRGQATRGVWKPTGAYMSSIDTLVESRDFSDGGNG--GFRLA-------------PEATADARLPCDHDVYLTRKHAACAAAAATGDQLSDSESEDSEGGDNPPLTLAYARSFFDDTMNTSLCSASGNVGID-HATQDTGTNAGIDPDGVERVDKRTLLGNSDSGPRLLERDVAIALLERERKKMREKDAERLPDRLGAIAAEV 2433
QPAQLG RAICA+ T G AATRQLKEMSFLQDL TE+EER R+FKASVEH+GE LL++REV V EE+R+ E+EL RRR ER SL TCLKGP EVGER AR+SL+FT GTQG+GF H PDWDLYKNDDWG+RREVLRRLVNL+G WI+R R+GRRL IQARL GLR RA+V MVE DN +AKL++GP S+++WK + A+ W+FPD VTS+ALAAEML+ V G G S EF SA DV ++RFP+Y+EG A R E D +GPP+ FVD+ LLPLKE E PRDE G D + G A +G GWR+ L++ ERR S+ATLGRRRSSVGL RY ++PE+ +DE SP WCLRP+ IPREVPVTKGLLLGYSPG+TTLRAYANAPRLSS WKP R+RRSSGL+CM GQA+RGVW+P A R D GNG G R+ EA A R D+ L HA AAAA GD+LSDSE P T A AR+ FDDT+ + G G+ + T D D V + LG G ++ RD A A LE R+ R KDAERL D + AI AEV
Sbjct: 612 QPAQLGGRAICAYLATVVDGKSG----------AATRQLKEMSFLQDLADTESEERDRSFKASVEHVGEPLLSQREVERVLEEQRRGEQELLRRRREKERESLQTCLKGPSEVGERCARASLLFTAEGTQGVGFRHKPDWDLYKNDDWGRRREVLRRLVNLVGAWIIRRRAGRRLGAIQARLSGLRDRAQVAEMVERDNHEAKLSAGPLAGTSQESWKPIADGGSSANENNDYGGDDGGWEFPDLLVTSEALAAEMLAESSAVRTTMGTGSSGTHXXXXXXXXXGQYTRHSAAXXXXXXEFQLSAEDVDQYRFPIYDEGAALSRREEVVDPVGPPSDFVDIDLLPLKEPE---------------------------------------PRDEEAEERGDGESDLSAEFGRNASSNGVRSASGWRQGLSTTERRPSKATLGRRRSSVGL--------------------------------------------------------RYKGFLPELPIDEASPEWCLRPQEIPREVPVTKGLLLGYSPGTTTLRAYANAPRLSSFWKPKRERRSSGLACMSGQASRGVWRPARAPXXXXXXXXNWR--GDEGNGVRGTRVVGGVGSVLNRASPGDEAPAVRRRGGDNTFRLAADHATVAAAA--GDELSDSEXXXXXXX-XPMPTPADARTVFDDTVAGRV----GETGMSLSGSSYTDPPLNSDGDSAACVKREGRLGGDVGGGKVFARDRATAALEDARRTKRLKDAERLADSMVAIGAEV 1278
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: A0A1V9Z0W8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z0W8_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.310e-15 Identity = 120/442 (27.15%), Postives = 166/442 (37.56%), Query Frame = 1
Query: 4 GKLKPKDLKEAIRKAREDRKRQLEEQEALRTLTASSEQEPIARPKPPESSVEILMPMDQSPDEKTAMPPSSIGAERRQPAQLGRRAICAFERTNALGSGNGETSGGGGGVAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEVGERFARSSLIFTGSGTQGIGFEHVPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGPQPIASRDTWKTVTSSEVDADWDFPDPFVTSQALAAEMLSGMEVGKWEGKGFSCPRLLETPPPPEFFFSAADVHRHRFPMYEEGGATKRIPEAFDEIGPP--TCFVDVPLLPLKEAEEGRSMGYQIGPPPALGTYPTAEESRMLRWSAFEECGVRQPR 1323
GK KPKDLK+AI + R RK Q EQEALR T S+ S E++ +E A P TRQLKE+ FLQ+L E+ F+++ E+IG+ LL + + + R + E S+ R RN+ + A +T E PD+++YKND W KR+ +L R V + K IVRLR G+RL I+A LG TR EV MVE D WK + V+S ++ +SG +L P ++ + FP+Y E + R+P + P T F D L PL E GY+ + Y E R +R A E G R PR
Sbjct: 317 GKFKPKDLKKAIDENRVLRKHQKAEQEALRQKTGSAGGR---------LSFEVIFM-----EESVASKPM------------------------------------------TRQLKELVFLQELQEINKIEKELEFQSNREYIGDILLKPENIEAIHKIRAFNQAEKDSKEREVLRNTFQSHGASVYSTPPMRAALPAFYTP--------ETEPDYNVYKNDLWAKRKRILVRFVQVASKLIVRLRVGKRLRKIKAWLGSATTRQEVRRMVERD------------------WKLALMN------------VSSDIRSSGKMSGTS------------SILSARAPAQYQLMS-------FPIYIESDSRLRLP-----VNPSVNTIFHDFNLFPLHVPREADRFGYKPHLLLPIPQYVPLEYGRKMRSGAQHEAGTRAPR 640
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: A0A2R5GIW7_9STRA (Cilia-and flagella-associated protein 221 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIW7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.940e-15 Identity = 63/181 (34.81%), Postives = 93/181 (51.38%), Query Frame = 1
Query: 331 VAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEVGERFARSSL-----IFTGSGTQGIGFEHVPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGP 858
+ T Q+KEM FLQ ++ E EER+R F + IG+ L E + + R + E +R ER++ T GP + + + + T Q P +D + ND+W KR+ V+ RL+N++GK +VR R+ RRL I RLG RTR V A+VE D+ +AKL P
Sbjct: 461 TSVTTQVKEMVFLQHVSEIEDEERSREFASQAVCIGDVRLEASETAAIQDARARVVVETALSQREEERHAFGTRCLGPTSIPPTRVSALVQAQQPMETQKDAQSEPAFEAPSFDPFVNDEWRKRKAVIVRLMNVVGKILVRKRAERRLTAIWKRLGSARTRKAVRALVEEDHIRAKLAVTP 641
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: D0NZK4_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NZK4_PHYIT) HSP 1 Score: 84.0 bits (206), Expect = 7.810e-13 Identity = 112/442 (25.34%), Postives = 174/442 (39.37%), Query Frame = 1
Query: 4 GKLKPKDLKEAIRKAREDRKRQLEEQEALRTLTASSEQEPIARPKPPESSVEILMPMDQSPDEKTAMPPSSIGAERRQPAQLGRRAICAFERTNALGSGNGETSGGGGGVAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEV-GERFARSSLIFTGSGTQGIGFEH-----VPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGPQPIASRDTWKTVTSSEVDADWDFPDPFVTSQALAAEMLSGMEVGKWEGKGFSCPRLLETPPPPEFFFSAADVHRHRFPMYEEGGATKRIPEAFDEIGPPTCFVDVPLLPLKEAEEGRSMGYQIGPPPALGTYPTAEESRMLRWSAFEECGV 1311
GKLKPKDLK+AI + R +++Q EEQ L T A P DQ D T + + E ERT +Q+K+M FL +L E+ F++ H+G++LL+ ++V + + R K R L +++R R L P V ++ + L+ G + H PD+ YKND W +R+ +LRRLV + ++RLR+ +RL I A L G +TRA+V V D Q+ +G + + + + + V++ + LS S P + E S HR + + G F + LK +E MG++ P PAL TY + +R+LR A +E GV
Sbjct: 350 GKLKPKDLKKAIARNRALQQQQREEQAKLSTGKA---------------------PDDQDEDAATLNFHALVQEEEGY-----------LERTR-----------------VGKQVKDMFFLHELREVAEAEKTLEFQSHKVHLGQRLLSSKQVDYLAKLREKNSRVLTNQQREQLRTMFINVLYDPPVVCDQKNDNNQLLLLGELKTAVLPAHFIPAYTPDFKPYKNDLWARRQRLLRRLVRAVSTCMLRLRAQKRLNRIHAWLDGSKTRAQVREKVALD-WQSSTQTGCIAVPEAEKYNVSMQKAIQKS----NESVSNDDSSRNYLS------------SFPIIEE---------STTQKHRESIDVPADWGLK---------------FTSFTFMELKPRDESLLMGHEPFPLPALPTYVPLQHTRLLRQGAKDEIGV 701
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: A0A2P4Y1M6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y1M6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.340e-6 Identity = 77/285 (27.02%), Postives = 119/285 (41.75%), Query Frame = 1
Query: 1 PGKLKPKDLKEAIRKAREDRKRQLEEQEALRTLTASSEQEPIARPKPPESSVEILMPMDQSPDEKTAMPPSSIGAERRQPAQLGRRAICAFERTNALGSGNGETSGGGGGVAATRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTCLKGPGEVG----ERFARSSLIFTGSGTQGIGFEHV-----PDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHD 828
PGKLKPKDLK+AI R +++Q EEQ L S +++ S ++LM ++ ER V ++Q+K+M F Q+L E+A F++ H+G++LL+ ++T++ + R L ++R R V E + + G + H PD+ YKND W +R+ VLRRLV + K I+RLR+ +RL I LG +TRA+V V D
Sbjct: 372 PGKLKPKDLKKAIAANRSLQQQQREEQAKLSMGNVSGDEDAAVL------SFQVLMQEEER----------------------------FLER-----------------VRVSKQVKDMFFQQELREVAEAEKALEFQSHKVHLGQRLLSREQITQIIKLRDFNSTALAYQQREQLRTMFINVHYESQLVSDYQHEHSDENQGLSLGELKTAVLPAHFVPAYSPDYKPYKNDLWTRRQRVLRRLVRAVSKCILRLRAQKRLDRIHVWLGETKTRAQVREKVALD 605
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Match: A0A8K1CMT9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT9_PYTOL) HSP 1 Score: 60.5 bits (145), Expect = 1.360e-5 Identity = 83/337 (24.63%), Postives = 129/337 (38.28%), Query Frame = 1
Query: 340 TRQLKEMSFLQDLTATEAEERARAFKASVEHIGEKLLTEREVTEVTEERRKCERELQSRRRVAERNSLHTC---LKGPGEVGERFARSSLI---FTGSGTQGIGFEHVPDWDLYKNDDWGKRREVLRRLVNLIGKWIVRLRSGRRLALIQARLGGLRTRAEVTAMVEHDNCQAKLTSGPQPIASRDTWKTVTSSEVDADWDFPDPFVTSQALAAEMLSGMEVGKWEGKGFSCPRLLETPPPPEFFFSAADVHRHRFPMYEEGGATKR----IPEAFDEIGPPTCFVDVPLLPLKEAEEGRSMGYQIGPPPALGTYPTAEESRMLRWSAFEECGVRQP 1320
+RQ++EM F Q+L+ E F++ +GE+LLT ++ + + R R LQ R R+++ + P + + L+ F + T PD+ +YKND W +R+ V++R V I I+R R +RL ++ LG TR +V A V D W+ Q S K P ET ++ FP+ EE R +P ++ P F PL+E +E MG+ P L TY E++R+LR A +EC V P
Sbjct: 412 SRQIREMLFQQELSEIARIESELEFQSHKIRLGEELLTPEQLELLHKMREMNARMLQRDEREKLRHTVENKAFNMFTPPTPEQPYPPRGLLPAHFQPTVT--------PDFKMYKNDLWARRKRVVQRFVRAISTVILRNRVQKRLTRLKDWLGDANTRLQVQAKVARD------------------WQ--------------------QHHQGRTASSHIKSK--------PASTETAQDRRYYLEG-------FPLVEEKEHKTRSKRTLPVEYELKFDPFAF-----FPLRERDEALMMGHTPLELPPLPTYVPLEDTRVLRVGALDECSVHGP 682 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1279.1748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1279.1748.1 >prot_H-paniculata_contig1279.1748.1 ID=prot_H-paniculata_contig1279.1748.1|Name=mRNA_H-paniculata_contig1279.1748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=811bp PGKLKPKDLKEAIRKAREDRKRQLEEQEALRTLTASSEQEPIARPKPPESback to top mRNA from alignment at H-paniculata_contig1279:239..25954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1279.1748.1 ID=mRNA_H-paniculata_contig1279.1748.1|Name=mRNA_H-paniculata_contig1279.1748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=25716bp|location=Sequence derived from alignment at H-paniculata_contig1279:239..25954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1279:239..25954- >mRNA_H-paniculata_contig1279.1748.1 ID=mRNA_H-paniculata_contig1279.1748.1|Name=mRNA_H-paniculata_contig1279.1748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4866bp|location=Sequence derived from alignment at H-paniculata_contig1279:239..25954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |