prot_H-paniculata_contig9651.17343.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9651.17343.1
Unique Nameprot_H-paniculata_contig9651.17343.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
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BLAST of mRNA_H-paniculata_contig9651.17343.1 vs. uniprot
Match: D7G7K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K7_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 7.080e-27
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0 
Query:    3 KLNSELLDQQLAAEAPMAEAGIPRMREMWSKELAKDEPNLDIKFQYALLLIKSRSQDLNREGMALLQG 70
            K+NSELLDQQL AEAP+AEA  PR+R+MW +E  KDEPNLDIKFQYAL LIK+RS D NREGM+LL+G
Sbjct:    4 KVNSELLDQQLKAEAPVAEASCPRLRDMWLQESNKDEPNLDIKFQYALTLIKTRSHDKNREGMSLLEG 71
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9651.17343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7K7_ECTSI7.080e-2775.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 14..71
e-value: 8.1E-8
score: 34.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 17..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9651contigH-paniculata_contig9651:1819..2793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9651.17343.1mRNA_H-paniculata_contig9651.17343.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9651 1624..3027 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9651.17343.1 ID=prot_H-paniculata_contig9651.17343.1|Name=mRNA_H-paniculata_contig9651.17343.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
MVKLNSELLDQQLAAEAPMAEAGIPRMREMWSKELAKDEPNLDIKFQYAL
LLIKSRSQDLNREGMALLQGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf