prot_H-paniculata_contig965.17339.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig965.17339.1
Unique Nameprot_H-paniculata_contig965.17339.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
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BLAST of mRNA_H-paniculata_contig965.17339.1 vs. uniprot
Match: D8LGF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF3_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 2.030e-38
Identity = 70/94 (74.47%), Postives = 79/94 (84.04%), Query Frame = 0 
Query:    1 SAVEQFRPSRRVLTPGFSGDQPSRIRGLARVDRVAHPTPKKYGLRTNAVAAGRSGYDIPDPGLVLQSKHMVMDDVTGRPARERVSGELTLEKAF 94
            SA EQFRP RRVLTPGFSG + +R +GLAR++     TP+  GLRTNA A+ RSGYDIPDPGLVLQSKH+VMDD TGRPA+ERVSGELTLEKAF
Sbjct:    4 SATEQFRPCRRVLTPGFSGTEEARPQGLARIESSPRVTPRPTGLRTNAKASRRSGYDIPDPGLVLQSKHVVMDD-TGRPAKERVSGELTLEKAF 96
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BLAST of mRNA_H-paniculata_contig965.17339.1 vs. uniprot
Match: A0A835YX95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX95_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.240e-21
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 0 
Query:   29 ARVDRVAHPTPKKY----------------GLRTNAVAAGRSGYDIPDPGLVLQSKHMVMDDV-TGRPARERVSGELTLEKAFAGLKRKINSQRARRGGVPAKGNPGDKLFHHVDYSPGFHQAGELVVGSSFYR 145
            AR  R A PT +K+                GLR     + RSG+D+PDP L LQ K +V+ D  TG  A++ VSGELTLE+ F G+K K+   R  R  + A+  PGDKL+HHVDYSPGF++ G  VVGS+F R
Sbjct:   59 ARRGREASPTGRKHFSPEPTGDGRAASARPGLRQIPELSRRSGFDMPDPDLSLQRKRVVVADAATGAFAKDHVSGELTLERTF-GVKHKLAEMRGVRNAI-AQACPGDKLYHHVDYSPGFYREGGHVVGSTFVR 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig965.17339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGF3_ECTSI2.030e-3874.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX95_9STRA1.240e-2146.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig965contigH-paniculata_contig965:1523..11450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig965.17339.1mRNA_H-paniculata_contig965.17339.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig965 1523..11450 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig965.17339.1 ID=prot_H-paniculata_contig965.17339.1|Name=mRNA_H-paniculata_contig965.17339.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
SAVEQFRPSRRVLTPGFSGDQPSRIRGLARVDRVAHPTPKKYGLRTNAVA
AGRSGYDIPDPGLVLQSKHMVMDDVTGRPARERVSGELTLEKAFAGLKRK
INSQRARRGGVPAKGNPGDKLFHHVDYSPGFHQAGELVVGSSFYRYYNTY
IMRDSPGVSTAVPKEVGYALGYRKPKIGFQERRQALQYVDELRCVLELTE
ATPPHAGGRGHEEHGISWEQKTGMHTWQKGGG*
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