prot_H-paniculata_contig9647.17337.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9647.17337.1
Unique Nameprot_H-paniculata_contig9647.17337.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
[Close]
BLAST of mRNA_H-paniculata_contig9647.17337.1 vs. uniprot
Match: A0A6H5K807_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K807_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.470e-32
Identity = 59/103 (57.28%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   11 ISDDNGVVVDGCSWGSVTAWPFRDAPRAYAAADASCGGGERGKKXXXXXXXXXXXXXXADREGVLRRAVREWPVGGHGVYTVVACPGESATAFVSARCPGPGW 113
            + D      DGCSWG+VT+WPFRDAPRAY  ADA C GG+R K+                  G   R  +EWPVGGHGVYTVVACPGE+A AFVSA+CPGPGW
Sbjct:  540 VRDQGQQRPDGCSWGAVTSWPFRDAPRAYPGADAPCAGGQRSKRGARKGRGGG---------GSEERCAKEWPVGGHGVYTVVACPGETAVAFVSAKCPGPGW 633
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9647.17337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K807_9PHAE3.470e-3257.28Cyclic nucleotide-binding domain-containing protei... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9647contigH-paniculata_contig9647:5820..6161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9647.17337.1mRNA_H-paniculata_contig9647.17337.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9647 5733..6755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9647.17337.1 ID=prot_H-paniculata_contig9647.17337.1|Name=mRNA_H-paniculata_contig9647.17337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MAAGDNSGGEISDDNGVVVDGCSWGSVTAWPFRDAPRAYAAADASCGGGE
RGKKKKRRARGDGVGGGGADREGVLRRAVREWPVGGHGVYTVVACPGESA
TAFVSARCPGPGW*
back to top