mRNA_H-paniculata_contig9645.17334.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9645.17334.1
Unique NamemRNA_H-paniculata_contig9645.17334.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 2.500e-179
Identity = 297/492 (60.37%), Postives = 355/492 (72.15%), Query Frame = 3
Query:  153 RNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEP 1619
            ++  +  L+   A  +   + NEPIP+PEC+ S  V++RYS+   RLY+E+ ++  RGGCV+L +I+E + G +PLYAVD +SG  SD+ATGTWLLTE+L+VEDGITL VHG    GDADELR+LS   T +NLRAHGGSL FL+TKV +WD      D +  DGRSYVS +SEVI DD + TC G  KNNMGEARMDI DSE+GYLGY+ SESYGLTWKVRGFC + SN ++F+ VNVYGNIY+S IH N FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN V+ NG HGIIASKRCN  +                    XXXXXXXXXXXXXXXX       ES+NA+V+DN+FENNKYGIRFSVGS  NVF +N+I  ST+Y  YSY GSD P V  +GRSQDNVF  N I GG+E+IKL ++DGT FIDNTF+  TTIRFND+ + LM GN GL    +KV NGA FD  SD  FEP
Sbjct:    7 KSALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDD-SQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFEP 497          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 3.990e-173
Identity = 271/500 (54.20%), Postives = 341/500 (68.20%), Query Frame = 3
Query:  165 IATLSFASALTQTVTAE----NEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTT----IRFNDSTEVLMMGNTGLEYVD--VKVNNGACFDDDSDSEFEPTC 1625
            +A L   ++ T    A+    N+PI +P+C++   V++RY+ T+ RLY+E+ +   RGGC +L +I+E R G +PLYAVDP+SG  S+  TGTWLLTE+LYVEDGITL V+G  E GDADELR+LS   T +NLRAHGGSL F+ TKV SWD    + D + TDGRSY+S +SE++ D+ + TCEGN KN MGEARMDI +SE+GYLG+  SESYGLTWKVRGFC + SNPEIFD VNVYGN+Y+S IH   FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN V+ NG HGIIASKRCN  +                                           ES+NA+V++N FENNKYG+R SVG  DNVFS+NII N++KY  Y+Y GSD P V ++GRSQ+NVFS N  SG  ETIK+KE+DGT F+DN F+        +RF+D+   +M GNTGL+  D  +KV N +CFD +SDS +EP C
Sbjct:   14 LALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDE-DETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 511 bits (1315), Expect = 2.960e-170
Identity = 265/467 (56.75%), Postives = 321/467 (68.74%), Query Frame = 3
Query:  228 PQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEP 1619
            P+P+C++S  V++RY+  SARLYIE+     RGGCV+L +I+EQ+   SPLYAVDP+SG  S +ATGTWLLTE++YVEDGITL VHG    GDADELR+LS   T ++LRA+GGSL FL+TKV +WD      D + +DGRSY+S +SEVI DD   TC G  KNNMGEARMDI +SE+ YLGY+ +E+YGLTWKVRGFC +  NPE+FD VNVYGNIY+S IH N FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN VW NG HGIIASKRCN  +                                           ES+NA+V+DN FENNKYG+R SVG   N+FS N+I  S ++  +SY G+D P V  +GRSQDNVF  N I GG+E+I LKE+DGT FIDNTF     IRF D+T+ LM GNTGL    +KV+ GA FD+ SD  FEP
Sbjct:    6 PKPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDD-RQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFEP 471          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 511 bits (1317), Expect = 4.940e-170
Identity = 268/466 (57.51%), Postives = 328/466 (70.39%), Query Frame = 3
Query:  258 VTLRYSNTSARLYIEAGEAGE-RGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHGGE-DGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTT----IRFNDSTEVLMMGNTGLE--YVDVKVNNGACFDDDSDSEFEPTC 1625
            V++RY+ T+ARLY+E+ + G  RGGCV+L +I+E R G  PLYAVDP+SG  S +ATGTWLLTE+LYVEDGITL V+G E  GDADELR+LS   T +NLRAHGGSL F++TKV SWD    + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI  SE+GYLGY  SESYGLTWKVRGFC + SNPE+FD VNVYGN+Y+S IH   FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN V+ NG HGIIASKRCN  +                                           ES+NA+V++N FENNKYG+RFSVG  DNVFS+N I N+ +Y  YSY G+D P V ++GRSQ+NVFS N  SG  ETIK+KE+DGT F+DN F+        +RF+++TE LM GNTGL+    ++KV+N ACFD ++DS +EP C
Sbjct:   44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 493 bits (1268), Expect = 8.100e-163
Identity = 271/497 (54.53%), Postives = 327/497 (65.79%), Query Frame = 3
Query:  144 MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625
            M+R    +  L+   A      + N+ I +P C +S  V++RYS TS RLY+E+ +   RGGCV+L +I+    G +PLYAV P SG  S + TGTWLLTE LYVEDGITL VHG    G ADELR+LS     +NLRAHGGSL F++TKV +WD       T+ + GRSY+S +SEVI D     C+G  K NMGEARMDI DSE+ YLGY  SESYGLTWKVRG C + SN E+FD VNVYGNIY+S IH NYFG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V+ NGNHGIIASKRCN XXXXXXXXXX                                   E++NA+V++N FE+NKYGIR SVG  DNVFS N I  S+KY VY+Y+GSD P+V  +GRSQD        SGG ET+KL  +DGT FIDNTF +  TIRF D    LM GN+GL    +KV +G+CFD  SDS ++P C
Sbjct:    4 MLRAFAVMTLLAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDS-KQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 481 bits (1237), Expect = 3.940e-158
Identity = 268/497 (53.92%), Postives = 334/497 (67.20%), Query Frame = 3
Query:  144 MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625
            M+R    ++ L+   A     +++N+ I +P C +S  V++RYS +S RLY+E+ +   RGGCV+L EI++   G++PLYAV P SG  S +ATGTWLLTEDLYVEDGITL VHG    G+A+ELR+LS     +NLRAHGGSL F++TKV +WD       T+ +  RSY+S +SE+I D     C+G  K  MGEARMDI DSE+ YLGY  SESYGLTWKVRGFC +GSNPE+FD VNVYGNIY+S IH N+FG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V                XXXXXXXXXX                      XXXX         ES+NA+V++N FE+NKYG+R SVG  DNVFS N+I +S+KY VY+YEGSD P+V  +GRSQDN+FS N I+GG E+IKL  +DGT FIDNTF    T RF D+   LM GNTGL    +KV+ GACFD  SDS+++P C
Sbjct:    7 MLRTAAIVSLLAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDS-KEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 1.250e-155
Identity = 253/475 (53.26%), Postives = 314/475 (66.11%), Query Frame = 3
Query:  216 NEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNS------PLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVP-------GTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLE-YVDVKVNNGACF 1589
            N PIP+PECN+++ V++RYS T+ RLY+EAG  GERGGCV++ +I+E RGG +      PLYAVDP SG  SD  TGTWLL EDLYVEDGITL V G G  G ADELR+ S P       GT +NLRAHGGSL F +TKV  WD    +YD + TDGRSY+S +SE++ D    TCEGN KN MGEARMDIV+SE+GY+G++ SESYGLTWKVRGFC + SNPE+FD VNVYGNIY+S++H   F +YTYGHQQGDWR N ++ N  YG+DPHDDSD L IHDN V+ N  HGIIASKRCNN                                             ES NA ++ N+FE NKYGIR SVG  DN  S+N + N+++Y +Y+Y+GSD   V  TGRSQDN+F  N + GG + IKLKESDGT   +N F     + F+++TE ++ GN GLE   +V++   ACF
Sbjct:  107 NTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPT-QTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.180e-131
Identity = 212/361 (58.73%), Postives = 254/361 (70.36%), Query Frame = 3
Query:  258 VTLRYSNTSARLYIEAGEAGE-RGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHGGE-DGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCN--NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTK 1328
            V++RY+ ++ARLY+E+ + G  RGGCV+L +I+E R G  PLYAVDP+SG  S +ATGTWLLTE+LYVEDGITL V+G E  GDADELR+LS   T +NLRAHGGSL F++TKV SWD    + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI  SE+GYLGY  SESYGLTWKVRGFC + SNPE+FD VNVYGN+Y+S IH   FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN V+ NG HGIIASKRCN  +                                           ES+NA+V++N FENNKYG+RFSVG  DNVFS+N I N+ +
Sbjct:   44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 2.710e-122
Identity = 188/296 (63.51%), Postives = 230/296 (77.70%), Query Frame = 3
Query:  168 ATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARLYIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLTEDLYVEDGITLNVHG-GEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKVVSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHG 1052
            AT+  A+A T    + N+PI +P+C++   V++RY++++ RLY+E+ +   RGGCV+L +I+E R G +PLYAVDPESG  S+N TGTWLLTE+LYVEDGITL V+G GE GDADELR+LS   T +NLRAHGGSL F+ TKV SWD    + D + TDGRSY+S ISE+I D+ + TCEGN KN MGEARMDI +SE+GYLG+  SESYGLTWKVRGFC + SNP IFD VNVYGN+Y+S IH   FG+YTYGHQQGDWR N M+DN  YGFDPHDDSD L IHDN V+ NGNHG
Sbjct:   21 ATMRAAAADTA---SPNDPISKPDCDSDIAVSIRYASSTKRLYLESADGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDE-DETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312          
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 2.170e-110
Identity = 188/311 (60.45%), Postives = 225/311 (72.35%), Query Frame = 3
Query:  699 CEGNPKNNMGEARMDIVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKIHDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNGNHGIIASKRCNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYSYEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAVTTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC 1625
            C G  K  MGEARMDI DSE+ YLGY  SESYGLTWKVRGFC +GSNPE+FD VNVYGNIY+S IH N+FG+YTYGH+QGDWR N M+ N +YGFDPHDDSD L IHDN V+ NGNHGIIASKRCN XXXXXXXXXX                       XX          ES+NA+V++N FE+NKYG+R SVG  DNVFS N+I +S++Y VY+YEGSD P+V  +GRSQDN+FS N I+GG E+IKL  +DGT FIDNTF +  T+RF D+ + +M GNTGL    +KV+ GACFD  SDS+++P C
Sbjct:   15 CNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9645.17334.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XAJ7_9PHAE2.500e-17960.37Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE4_ECTSI3.990e-17354.20Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE2.960e-17056.75Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7G339_ECTSI4.940e-17057.51Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
A8CEP1_SACJA8.100e-16354.53Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
Q7XAK2_9PHAE3.940e-15853.92Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
D8LD45_ECTSI1.250e-15553.26Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE5_ECTSI1.180e-13158.73Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JU98_9PHAE2.710e-12263.51MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
Q7XAJ9_9PHAE2.170e-11060.45Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9645contigH-paniculata_contig9645:862..7538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score323.9
Seed ortholog evalue1.3e-85
Seed eggNOG ortholog2880.D7G8D9
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons8
Model size2608
Cds size1485
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9645.17334.1prot_H-paniculata_contig9645.17334.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9645 1795..6558 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931196.0881195-UTR-H-paniculata_contig9645:861..9691622931196.0881195-UTR-H-paniculata_contig9645:861..969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 862..969 +
1691481633.570984-UTR-H-paniculata_contig9645:861..9691691481633.570984-UTR-H-paniculata_contig9645:861..969Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 862..969 +
1622931196.1038282-UTR-H-paniculata_contig9645:1759..17941622931196.1038282-UTR-H-paniculata_contig9645:1759..1794Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 1760..1794 +
1691481633.5955307-UTR-H-paniculata_contig9645:1759..17941691481633.5955307-UTR-H-paniculata_contig9645:1759..1794Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 1760..1794 +
1622931196.231842-UTR-H-paniculata_contig9645:6558..75381622931196.231842-UTR-H-paniculata_contig9645:6558..7538Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 6559..7538 +
1691481633.6831539-UTR-H-paniculata_contig9645:6558..75381691481633.6831539-UTR-H-paniculata_contig9645:6558..7538Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9645 6559..7538 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931196.1172283-CDS-H-paniculata_contig9645:1794..21301622931196.1172283-CDS-H-paniculata_contig9645:1794..2130Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 1795..2130 +
1691481633.6079216-CDS-H-paniculata_contig9645:1794..21301691481633.6079216-CDS-H-paniculata_contig9645:1794..2130Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 1795..2130 +
1622931196.1293554-CDS-H-paniculata_contig9645:2793..29041622931196.1293554-CDS-H-paniculata_contig9645:2793..2904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 2794..2904 +
1691481633.6178625-CDS-H-paniculata_contig9645:2793..29041691481633.6178625-CDS-H-paniculata_contig9645:2793..2904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 2794..2904 +
1622931196.1430655-CDS-H-paniculata_contig9645:4097..43161622931196.1430655-CDS-H-paniculata_contig9645:4097..4316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 4098..4316 +
1691481633.6271677-CDS-H-paniculata_contig9645:4097..43161691481633.6271677-CDS-H-paniculata_contig9645:4097..4316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 4098..4316 +
1622931196.1557255-CDS-H-paniculata_contig9645:4737..48521622931196.1557255-CDS-H-paniculata_contig9645:4737..4852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 4738..4852 +
1691481633.6374454-CDS-H-paniculata_contig9645:4737..48521691481633.6374454-CDS-H-paniculata_contig9645:4737..4852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 4738..4852 +
1622931196.1737235-CDS-H-paniculata_contig9645:5258..54981622931196.1737235-CDS-H-paniculata_contig9645:5258..5498Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 5259..5498 +
1691481633.6486204-CDS-H-paniculata_contig9645:5258..54981691481633.6486204-CDS-H-paniculata_contig9645:5258..5498Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 5259..5498 +
1622931196.1941066-CDS-H-paniculata_contig9645:5802..59651622931196.1941066-CDS-H-paniculata_contig9645:5802..5965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 5803..5965 +
1691481633.6602201-CDS-H-paniculata_contig9645:5802..59651691481633.6602201-CDS-H-paniculata_contig9645:5802..5965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 5803..5965 +
1622931196.2125826-CDS-H-paniculata_contig9645:6257..65581622931196.2125826-CDS-H-paniculata_contig9645:6257..6558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 6258..6558 +
1691481633.6723914-CDS-H-paniculata_contig9645:6257..65581691481633.6723914-CDS-H-paniculata_contig9645:6257..6558Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9645 6258..6558 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9645.17334.1

>prot_H-paniculata_contig9645.17334.1 ID=prot_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp
MVRRNVAIATLSFASALTQTVTAENEPIPQPECNASKPVTLRYSNTSARL
YIEAGEAGERGGCVSLNEIFEQRGGNSPLYAVDPESGARSDNATGTWLLT
EDLYVEDGITLNVHGGEDGDADELRILSVPGTVLNLRAHGGSLSFLNTKV
VSWDEEAMTYDTNVTDGRSYVSVISEVINDDVNYTCEGNPKNNMGEARMD
IVDSEVGYLGYNASESYGLTWKVRGFCTNGSNPEIFDTVNVYGNIYNSKI
HDNYFGIYTYGHQQGDWRENDMYDNIQYGFDPHDDSDLLNIHDNTVWGNG
NHGIIASKRCNNVSIQNNVVWGGDQAGLFLHRSTDYAIVKGNWVYNNSDA
GLAIMESYNANVTDNVFENNKYGIRFSVGSNDNVFSDNIIDNSTKYGVYS
YEGSDLPYVSATGRSQDNVFSGNQISGGLETIKLKESDGTAFIDNTFDAV
TTIRFNDSTEVLMMGNTGLEYVDVKVNNGACFDDDSDSEFEPTC*
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mRNA from alignment at H-paniculata_contig9645:862..7538+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9645.17334.1 ID=mRNA_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6677bp|location=Sequence derived from alignment at H-paniculata_contig9645:862..7538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCTTCTACCGATATCAAACCGGGCCTTGCAACCGACTGTCTACCGTAGCA GGAGCTCTTCAGGAAGCGACATTTCATTGGCGCCCTGCTGCAGCGGGTGT TAGGAAAAGTGAGTGTCCACGGTCCGTTATTATCCTTAGAGGTCAAGCGG AGAAAATCTTCAAGTCCAGCATTTTGTTAAAATCCACTGACCTGTGCACA AATAATGTGATCATTCGTATACAACTTGAGGCATGCACTGGAGCGTTAGT CATTTGGAGTGTGAACCCGTCGTCGCTGTTATTACAATGGCCATGAGGCA CAACAGGTTCGACTCGTGCTCGCATCAAGCGATAGAGAGCTCTACTTGTG GACCTCTATGCTCAAAACCACGATCGACCATTTGTGTGCTGTTTGTGAAC CCAGGCTACAGCCCGCATGAACACTCGTGAAAGACTAATTTCCCGACATT TTACTATACGAAAGTTGTGTAATCTTGTTGTGGTAGTACAGTAGATATGA TTGAGGGCCTGAAAGTGCGCTGTGCGAACGAAGGCTCGGTCGTCTTTTAT AGCATCAATCGCAGCTTCTTCAGTCTGTGCACACATGGGCAAGTCACAAA GAACAAATAGCAGATAATAGCAGATAACCGATATCGGTGACTGGCATAAC AATTTCGTGGGGATTTTTTAGATTGTGTGCAGCCTTCAATTTATCTCCCC CGGGTCACATTATTGTACTATTCCCTATCCCGAATGGTAAGGCAGCACTG AGATACCAGGTACTGAGGCCGATACAACCTATACCCAGGAGTTTAGAGTG GACCCAAGAGGCGCGTTCCATGGGACGCGCGTGAAAATTGACCCCCACGT TTACCCTTTACCTTGATCGTCGCACGACTCACACATTCGTCATTTCAGTT ACTGCTTCAGGCCCAACGGAGAGGAATTCCAGGATGGTTCGAAGGAACGT CGCCATCGCGACGCTAAGCTTCGCCAGTGCTCTGACACAGACTGTCACCG CCGAAAACGAGCCCATCCCACAACCAGAATGCAACGCAAGTAAGCCTGTA ACACTTCGCTACTCGAACACGAGCGCGCGACTGTATATCGAGGCGGGGGA GGCGGGGGAGCGTGGCGGATGTGTCTCACTCAATGAAATATTCGAGCAAC GAGGTGGGAACTCCCCCCTCTATGCTGTGGACCCTGAGTCGGGAGCTCGA TCAGACAATGCGACTGGTACGTGGCTCCTGACGGAAGACCTTTACGTGGA GGATGGCATCACACTGAACGTGAGAAGTACTACAGTCGTGTTGTGAATTA AGAGTTGGAGTTTGGCACGTATCAGCGCGACTGGAAATCCAAGCAGAGAC GCAGCCTGACTGTCTTGAATATGTTGAGGTTCTGGGGAACGGAGAAAGTC TCAGGGGTAGTGGATTGTCCAACCACTTATCACGCTTTCGTTTTTTCCTA TTTTTAATATCGATTTTCTGTCTTTTTTGTTTAATGCACCCTGAGGTTGT GTCGGAAATGATAATGAAAATTACTATACATTCATCGGAAATGAATGCTG CAAGTAAAAATCACACTTACTCATTTCCGAAAGTTCTTGATTGAAACAAA TCGAGGGGGGGAGGGGCGGGGACTTTCGTCGAGAACGGCCCTAGCAAGGC TGTTCAAAAAGAACAATAGATCCTGCCAGCCGATAACTACAGTAGTCGGA TTAGTCGTCACGAATTTTGTCGACACTTGGCAGCTCGAACAGTCGAGTAG AACCGCGCTGGCGCGGATGCCACTTGACATGTTTTTTCTTCAAGGGGTGG CGTTAAACTTACGATGAGCGATGTGCATAGTAAAAAACTACCTGATGTAC AATGTTCATCGGATTACAAACCTGCATTTTTGACTATTTTCCAGCCTTAC GACGCGCCGCCGCATATTCGTACAATTCATAGGTTCACGGCGGAGAAGAT GGCGACGCAGATGAACTCCGCATCCTGTCTGTGCCTGGGACCGTGCTGAA CCTCAGAGCGCACGGCGGTAGTTTGAGTTTCTTGAACACCAAGGTGGGTT TCAGTTTGCGTAGGATATACATATTTATCGCCCTCCAGGCATTTTGAGTT GTGTCGCATGTGCCTATGTACTTCTTGTCCTCTACCCTCGTCGACAACAC AGCAGCATGTTCAAAGTGACGTTCAGTCGCTACCCTTGGAGAAATAACAA ATCTCTTGTTGCCTGGGCATCGCACCGATTGATCATAATCATGTCGCACG CGTTGTTTGAGCTGTGTTGGAGCTGAGAATAACATATTTCGACTCAGCAT GTGAAAGACATCCGTTCACGTTCTTCCACTCAGCGTGCAATAGAAACCAC AGTCGTATATATTGCTTGTCCGTCGAAGCCGTGGCTGATGCCATGGAAGT TCGGCTGCTGTGCTGTATTTCTCTACTTCCTCTGACTGCATTGTCTTGCA AATATACCCTCAACAATGGAATGCTATATTTTTGTTTGGAAAAAAGCTGC AATGGGTGCTTCAAGCCAAACGCAAAGTTGCACATGTTTCCATCACCTAC TTCCGTAATATAAAAAGGCGTCGGTGTCTGATAGGTCGGCATCCGGCATA CGTCACGAAAGTGATATCTATCTCGTACTTCCTCTGTACCATAAGTAAAG TCGGTTTTATTTAGCAGATTACATCTCCAGATCGGAGCCTAATTAGAGGC TGCGGTTGGACTCGTTGGAAAGTTGAAATTTGATAGACTCATATACGCTA TTCCCCGAAATGAATTCCGATTTGTGTATCAGGATTAATAGTCGCTCAAG GTTAGGCTAATCCTGATCATTTTCACGTCTTTTTTCTCGATTTTCACGTT TTTCCAATGGGAGAATACGAAAAAGAGAAACAGTGGCCTTGCTTCCACCG AAATTTCTGTTTTTGCGCCACGCGCTCCTAATGGATTTCGCCATTTTCCA TGAAATTTGGAGATCAACCCCAAAAATTGGAGATGGTTACGTGCCTCCAT AAGCTCAACCGACTTTGGTTACTTTGGCACAGAGGAAGTGTAATAGTAAT ATTTCTATCGCACTACCTAACACAACACGTTATACCGCCTGAGCTTCAGT AGTATCGGGGCAATAGATCCTGACTGCTCAATGCCAATGAAATATCTAAA TCGGCCGGAATCAATTTTATGTTCGGTAGTGAAAAGAATATCGAACATGG CGCCCCATCGTTTCGACCTCGCGGTGACTGTCGCAGGTTGTCTCGTGGGA CGAAGAAGCCATGACCTATGATACCAACGTCACGGACGGCCGCTCGTACG TGAGCGTCATCTCGGAGGTGATCAACGACGACGTGAACTATACGTGCGAG GGAAATCCTAAGAACAACATGGGCGAGGCGCGGATGGACATCGTCGACAG CGAGGTCGGCTACCTGGGGTACAATGCCTCTGAGTCGTATGGTCTGACGT GGAAGGTATGATGCGACTACGGTCGCACAAAAGTGTTCGATAAAGCACCA CACTTCACACTTTTGAGGTACATCGTTGTATACGGCGCCAATCGTTCTAG GTGGTTTCCGCTACATGCTGCGCAACAGTAGATGGGGGGTGTCGAAGTCT ACAGTAGGTATATCTACCAGAAAAGGGTGCTTTGATTTGCAGGTCATAAT GTGTGCTGTGACCCGCCATGCCTGACGGTATGTGTGGGGATATTACGTTT GATGGCAGGGCTCAACTTCCAGAAATTGTGGGCAAGGGTCTCAGAGCTGA AGGAAATACACGGTAAACACAGAAACACACATGAAACTATGATCACGTTG CCGATTTCATGCTTCAACTTCCAAAGAACTGTGTCTAACACGCCTGTACC TTTGCTTGTACCACCTAACATATCAGGTACGCGGATTCTGTACCAATGGG TCAAACCCCGAGATCTTTGATACCGTCAACGTGTATGGAAACATCTACAA CTCCAAGATCCACGACAACTACTTCGGTATTTACACATACGGTAAGCTGT CAAGGAAATTTTGATTGAGAAAGCTGGACATGACATTGTAGCGCTTGATA GCCGCGCTGGGCGTGACGCGGATGCGAAAGAGTACTCATGGTGTATGTTC GAGTGAAGCGGTTCGCAACTGAAAAGATTAGACTAAACGCCGTTTGTTCC TAAACTTCTTGGCTACGGAAAAAATGTGCTGCTTGGCGGCTACGAGGACA CGAAATTGGAAAAATGTGTATGGTGGTATATCGCCTTGTTCGATGATACC GGTATATCCAATATTCAATAGATATAGAGTAGTATTGTTGCTATAGCACT TATACTCTGCTGTTAGGGTTTGGTTGTTTTGGCGCCTTCTCGATCGCCTC ATCTTAAAAATGACCTTGCTCGACCGTTGATGTCTCCTTTGAACCAGGAC ACCAGCAGGGCGATTGGCGAGAAAACGATATGTACGACAATATTCAGTAC GGCTTCGACCCCCACGATGACAGTGACCTGCTGAACATCCACGATAACAC GGTCTGGGGCAACGGAAACCACGGCATCATCGCTTCCAAGCGCTGCAACA ATGTTTCAATCCAGAACAACGTAGTATGGGGTGGAGATCAGGCAGGCCTT TTCTTGCACCGCAGCACCGACTACGCTATCGTCAAGGGTGAGTACGGGCT GCGGGGTGCTAGGATGGCTGTTAGCAATACATGTTTTAATACTGCTGCGA GTGGCGACAGGTGCGTCAGCCCCTTATAGGCGCACGACCTCACTCCCGAA CTCTAACAAATCATATCTGCATACCCACGAACCAACTACCAGCGATGGAG CAGACGAGTGAAATGTAGGGGAACATAAGGAGAATTGCCAAAATTTAGAA CACGGCGTTCGCTGGTAATACCCAATCCACCATTGCGTTCGAGCGGAGCA CGCCACAAGTTTGTCGAACTAACTTCGCCTGATGCCAACAGGTAACTGGG TATACAACAACAGTGATGCTGGCCTCGCGATCATGGAATCCTACAACGCC AATGTGACCGACAACGTGTTCGAGAACAACAAGTACGGCATCAGATTTTC AGTGGGGAGCAATGACAATGTCTTCAGTGATAATATCATCGACAACTCAA CCAAGTGAGTCCCTTGACTGTTTTAAAGAATATATACAATTTCGCCACGG TGTGCGGTACCGCTTTGCTAGTATTCCAAAGCAGGTTCGGAAAAAAGGTC GCGGCGACCGATATTCAAATACTTCGTGTACTACAACGTTTTGTCGGGTC TTCACTTGGCCGTTTCCAATGCCTTGCGCTCATTTCACGCGCGCCCTCCG GTCGCAAAGCAAGAATTGTTCCAGGTTGCGTACGATATTTCGTGCGCTAT GCCGTCACTCAACTGCATTCTCCCCTAAATGCGTGTCATACCACAGGTAT GGCGTCTACTCCTACGAGGGCTCCGATTTGCCTTACGTGTCGGCCACAGG CCGTTCGCAGGACAACGTATTCTCGGGAAACCAGATCTCGGGGGGCTTGG AAACCATCAAGCTGAAGGAATCTGATGGTACAGCCTTTATCGACAACACT TTCGATGCTGTTACCACTATTCGCTTTAACGACTCCACCGAGGTTCTCAT GATGGGCAATACCGGCCTAGAATATGTAGATGTCAAGGTAAACAACGGCG CTTGCTTCGATGATGACTCCGACAGTGAGTTCGAGCCCACGTGCTAATTC ACGACGAAGGCCATAATTGTTTTCTGCGTTGATAACTTTAGCCTTCCTGG TTGTATTCCAAAACACTGGATACATGGCGGGGTGGCATGAATCGAGCAGA CAAGCACTTCGTTGGATGCTCGTAGGTAGGTATCCTTCATCAACGGTCCA CTATTTTGGGGAAGGTTGACAGTTGTGTTTTTATGCTCAAAGCCCCTCTC ATTTGAGATTAGGGTTAGCTCAGTGTGGAAATCTGTGACGCTAGTCTATT GACGTATATTCCGTTAGTACTCCCGGTGTTTAATAAATCTCCAGGTAGGA TCGAACATAGTTTTTGTGTGATGCGTGCGTTGCATAGTGACCCGTGCTCT TACACAAGGTTCAGCAGTTTAGCTCTGCGAGGAACGCTGTACCTCCCTGT GGCAATGCGGGGGCTGCCTATCGTCTGCATGTGTTCGTGAATTTTGCGGT CCATTGTTTCAACCCGAAAGTGTAATCTAGATTAAGCTCGAGTCTGTGGT GGTTGCAACGTGTTTTGATCCCCTTAGTGGATTGGTAATACCTACACGGT GATGTCTGTATGTGCTAGTAGTATACGATGTCGCTGCTCAGGCTATGTTT GTGAAAAGTACTAAAAGGTTGGGGTTCTAACGGTAGTGTTATGGTATGTA ATGTGTTGCAGAATTGCTGCAGGTGTCCGTTGGTATCCCTTCGTATTCGT GTGTATATATGTAGGGTAGGGATAAAGTTCTGAAAAAAGAGAAATGGGGA AGCAACGGCTGAATCGATAAACATGTCGATATCGATGCCACTTGGGATAA AACAAGCTGCCACAAGGTTACAAAGTGTCATAAATTGGTCTCGGGCCTTG AGCAAGCACTCGAAATTGAAAAGGTCGTGTTTTTTGTATTATTTCATTTC CAAGTATCTTGTTGCCCTTTGAGCACCACGTGAGCCCCGGCTTTGAAGTA GTGTTATTTTTTCCCTTTCCCTCTGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig9645:862..7538+

>mRNA_H-paniculata_contig9645.17334.1 ID=mRNA_H-paniculata_contig9645.17334.1|Name=mRNA_H-paniculata_contig9645.17334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at H-paniculata_contig9645:862..7538+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTCGAAGGAACGTCGCCATCGCGACGCTAAGCTTCGCCAGTGCTCT
GACACAGACTGTCACCGCCGAAAACGAGCCCATCCCACAACCAGAATGCA
ACGCAAGTAAGCCTGTAACACTTCGCTACTCGAACACGAGCGCGCGACTG
TATATCGAGGCGGGGGAGGCGGGGGAGCGTGGCGGATGTGTCTCACTCAA
TGAAATATTCGAGCAACGAGGTGGGAACTCCCCCCTCTATGCTGTGGACC
CTGAGTCGGGAGCTCGATCAGACAATGCGACTGGTACGTGGCTCCTGACG
GAAGACCTTTACGTGGAGGATGGCATCACACTGAACATGGTTCGAAGGAA
CGTCGCCATCGCGACGCTAAGCTTCGCCAGTGCTCTGACACAGACTGTCA
CCGCCGAAAACGAGCCCATCCCACAACCAGAATGCAACGCAAGTAAGCCT
GTAACACTTCGCTACTCGAACACGAGCGCGCGACTGTATATCGAGGCGGG
GGAGGCGGGGGAGCGTGGCGGATGTGTCTCACTCAATGAAATATTCGAGC
AACGAGGTGGGAACTCCCCCCTCTATGCTGTGGACCCTGAGTCGGGAGCT
CGATCAGACAATGCGACTGGTACGTGGCTCCTGACGGAAGACCTTTACGT
GGAGGATGGCATCACACTGAACGTTCACGGCGGAGAAGATGGCGACGCAG
ATGAACTCCGCATCCTGTCTGTGCCTGGGACCGTGCTGAACCTCAGAGCG
CACGGCGGTAGTTTGAGTTTCTTGAACACCAAGGTTCACGGCGGAGAAGA
TGGCGACGCAGATGAACTCCGCATCCTGTCTGTGCCTGGGACCGTGCTGA
ACCTCAGAGCGCACGGCGGTAGTTTGAGTTTCTTGAACACCAAGGTTGTC
TCGTGGGACGAAGAAGCCATGACCTATGATACCAACGTCACGGACGGCCG
CTCGTACGTGAGCGTCATCTCGGAGGTGATCAACGACGACGTGAACTATA
CGTGCGAGGGAAATCCTAAGAACAACATGGGCGAGGCGCGGATGGACATC
GTCGACAGCGAGGTCGGCTACCTGGGGTACAATGCCTCTGAGTCGTATGG
TCTGACGTGGAAGGTTGTCTCGTGGGACGAAGAAGCCATGACCTATGATA
CCAACGTCACGGACGGCCGCTCGTACGTGAGCGTCATCTCGGAGGTGATC
AACGACGACGTGAACTATACGTGCGAGGGAAATCCTAAGAACAACATGGG
CGAGGCGCGGATGGACATCGTCGACAGCGAGGTCGGCTACCTGGGGTACA
ATGCCTCTGAGTCGTATGGTCTGACGTGGAAGGTACGCGGATTCTGTACC
AATGGGTCAAACCCCGAGATCTTTGATACCGTCAACGTGTATGGAAACAT
CTACAACTCCAAGATCCACGACAACTACTTCGGTATTTACACATACGGTA
CGCGGATTCTGTACCAATGGGTCAAACCCCGAGATCTTTGATACCGTCAA
CGTGTATGGAAACATCTACAACTCCAAGATCCACGACAACTACTTCGGTA
TTTACACATACGGACACCAGCAGGGCGATTGGCGAGAAAACGATATGTAC
GACAATATTCAGTACGGCTTCGACCCCCACGATGACAGTGACCTGCTGAA
CATCCACGATAACACGGTCTGGGGCAACGGAAACCACGGCATCATCGCTT
CCAAGCGCTGCAACAATGTTTCAATCCAGAACAACGTAGTATGGGGTGGA
GATCAGGCAGGCCTTTTCTTGCACCGCAGCACCGACTACGCTATCGTCAA
GGGACACCAGCAGGGCGATTGGCGAGAAAACGATATGTACGACAATATTC
AGTACGGCTTCGACCCCCACGATGACAGTGACCTGCTGAACATCCACGAT
AACACGGTCTGGGGCAACGGAAACCACGGCATCATCGCTTCCAAGCGCTG
CAACAATGTTTCAATCCAGAACAACGTAGTATGGGGTGGAGATCAGGCAG
GCCTTTTCTTGCACCGCAGCACCGACTACGCTATCGTCAAGGGTAACTGG
GTATACAACAACAGTGATGCTGGCCTCGCGATCATGGAATCCTACAACGC
CAATGTGACCGACAACGTGTTCGAGAACAACAAGTACGGCATCAGATTTT
CAGTGGGGAGCAATGACAATGTCTTCAGTGATAATATCATCGACAACTCA
ACCAAGTAACTGGGTATACAACAACAGTGATGCTGGCCTCGCGATCATGG
AATCCTACAACGCCAATGTGACCGACAACGTGTTCGAGAACAACAAGTAC
GGCATCAGATTTTCAGTGGGGAGCAATGACAATGTCTTCAGTGATAATAT
CATCGACAACTCAACCAAGTATGGCGTCTACTCCTACGAGGGCTCCGATT
TGCCTTACGTGTCGGCCACAGGCCGTTCGCAGGACAACGTATTCTCGGGA
AACCAGATCTCGGGGGGCTTGGAAACCATCAAGCTGAAGGAATCTGATGG
TACAGCCTTTATCGACAACACTTTCGATGCTGTTACCACTATTCGCTTTA
ACGACTCCACCGAGGTTCTCATGATGGGCAATACCGGCCTAGAATATGTA
GATGTCAAGGTAAACAACGGCGCTTGCTTCGATGATGACTCCGACAGTGA
GTTCGAGCCCACGTGCTAAGTATGGCGTCTACTCCTACGAGGGCTCCGAT
TTGCCTTACGTGTCGGCCACAGGCCGTTCGCAGGACAACGTATTCTCGGG
AAACCAGATCTCGGGGGGCTTGGAAACCATCAAGCTGAAGGAATCTGATG
GTACAGCCTTTATCGACAACACTTTCGATGCTGTTACCACTATTCGCTTT
AACGACTCCACCGAGGTTCTCATGATGGGCAATACCGGCCTAGAATATGT
AGATGTCAAGGTAAACAACGGCGCTTGCTTCGATGATGACTCCGACAGTG
AGTTCGAGCCCACGTGCTAA
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