mRNA_H-paniculata_contig9623.17322.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9623.17322.1
Unique NamemRNA_H-paniculata_contig9623.17322.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: 1433_FUCVE (14-3-3-like protein n=3 Tax=Phaeophyceae TaxID=2870 RepID=1433_FUCVE)

HSP 1 Score: 459 bits (1180), Expect = 4.830e-158
Identity = 240/251 (95.62%), Postives = 244/251 (97.21%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLI-MQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            M SRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDIC DILKIIE+ELIPNSTSEEGKVFYYKMKGDYHRYLAEFQS D+RKTSASDALDAYQ AS+ ANQDLPPTHPIRLGLALNFSVFYYEILNSP+RAC LAKAAFDDAIAELDTLSEESYKDSTLI MQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL
Sbjct:    1 MASRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICADILKIIEAELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSADERKTSASDALDAYQLASDHANQDLPPTHPIRLGLALNFSVFYYEILNSPDRACGLAKAAFDDAIAELDTLSEESYKDSTLIIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 251          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: W7TWA9_9STRA (14-3-3-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWA9_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.490e-126
Identity = 201/251 (80.08%), Postives = 220/251 (87.65%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA-PGNADGTVVEDL 750
            M SRD LVY AKLAEQAERFDEMVDHMKAVAQQP+ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K    ++LPLIR+YK+KIE EL +IC+DIL IIE+ELIPNSTSEEGKVFY+KMKGDYHRYLAEFQ  + R+ S+  AL AY+ A+++A  DLPPTHPIRLGLALNFSVF+YEI NSP+RAC LAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ EA+EA   N DG  VEDL
Sbjct:    1 MDSRDSLVYKAKLAEQAERFDEMVDHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKGE-QERLPLIREYKAKIEDELLEICNDILNIIETELIPNSTSEEGKVFYFKMKGDYHRYLAEFQVGEKRRESSDAALSAYKCATDIAEHDLPPTHPIRLGLALNFSVFFYEIYNSPDRACALAKKAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQNEADEAGANNEDGNRVEDL 250          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A835YSI6_9STRA (14-3-3-like protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI6_9STRA)

HSP 1 Score: 377 bits (967), Expect = 8.170e-126
Identity = 198/247 (80.16%), Postives = 218/247 (88.26%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            R  LVY AKLAEQAERFDEMV  MK V+ QP+ELSVEERNLLSVAYKNVIG+RRASWRVISSIE K    ++LPLIRDYK KIETEL +IC +IL IIE+ELIPNS++ EGKVFYYKMKGDYHRYL+EFQ+ D RK S+  AL+AYQ A+E ++QDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGE +EA  +ADGT VED+
Sbjct:    3 RSALVYQAKLAEQAERFDEMVSFMKQVSVQPQELSVEERNLLSVAYKNVIGARRASWRVISSIEQKGE-PEKLPLIRDYKKKIETELEEICTEILGIIENELIPNSSATEGKVFYYKMKGDYHRYLSEFQAHDARKESSDKALEAYQHATEWSHQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEGDEAGADADGTRVEDM 248          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A7S3IA22_9CILI (Hypothetical protein n=1 Tax=Fabrea salina TaxID=342563 RepID=A0A7S3IA22_9CILI)

HSP 1 Score: 374 bits (961), Expect = 8.450e-125
Identity = 194/234 (82.91%), Postives = 213/234 (91.03%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEE 711
            RD LVYMAKL+EQAERFDEMV+HMKAVAQQP+ELSVEERNLLSVAYKNVIGSRRASWRV+SSIE K   +D+L LI+DYK+KIE EL DIC DILKII  ELIP STSEEGKVFYYKM+GDYHRYLAEFQS +DRKTS+S AL AY+SAS +AN DLPPTHPIRLGLALNFSVF+YEI+NSP+RAC LAK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS+Q + +E
Sbjct:   21 RDSLVYMAKLSEQAERFDEMVEHMKAVAQQPQELSVEERNLLSVAYKNVIGSRRASWRVLSSIESKGE-ADKLQLIQDYKNKIERELVDICADILKIITDELIPRSTSEEGKVFYYKMQGDYHRYLAEFQSGEDRKTSSSSALSAYESASGIANSDLPPTHPIRLGLALNFSVFFYEIMNSPDRACQLAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSEQEQTDE 253          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A8J2SJV0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJV0_9STRA)

HSP 1 Score: 368 bits (944), Expect = 2.620e-122
Identity = 193/248 (77.82%), Postives = 215/248 (86.69%), Query Frame = 1
Query:    7 SRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            +R++LVY+AKLAEQAERFDEMVDHMK+VA   +ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K   S++  LI +YK KIETEL  IC+DIL IIE  LIPNS  +EGKVFYYKMKGDYHRYLAEFQS D RK S+S AL++YQ AS++AN+DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD  +      NADGT V+DL
Sbjct:    6 TRENLVYLAKLAEQAERFDEMVDHMKSVANYSEELSVEERNLLSVAYKNVIGSRRASWRVISSIEQKSD-SEKTALITNYKKKIETELETICEDILGIIEKTLIPNSAGDEGKVFYYKMKGDYHRYLAEFQSADKRKESSSSALESYQQASQIANKDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNADNNH-DNNADGTAVQDL 251          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: B8BX06_THAPS (14-3-3-like protein n=3 Tax=Thalassiosirales TaxID=33847 RepID=B8BX06_THAPS)

HSP 1 Score: 362 bits (929), Expect = 4.200e-120
Identity = 189/235 (80.43%), Postives = 208/235 (88.51%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K   +D++ +I+DYK+KIE EL DIC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ  D RK SAS ALDAYQSA+E+A+ DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQ    EA
Sbjct:    3 RDSLVYKAKLAEQAERFDEMVSDMKEVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-ADKMSIIKDYKAKIENELCDICNDILSIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQQGDVRKASASAALDAYQSATEVASSDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQAADAEA 236          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A7S1H1R2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1R2_9STRA)

HSP 1 Score: 360 bits (923), Expect = 5.730e-119
Identity = 188/240 (78.33%), Postives = 210/240 (87.50%), Query Frame = 1
Query:    1 MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQG-EAEEAP 717
            M  RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIG+RRASWRV++SIE K    D+LP I+DYK+KIE EL DIC+DIL IIE  LI NSTSEE KVFYYKMKGDYHRYL+EFQ+ D RK SA+ ALDAYQ+AS +A+ DLPPTHPIRLGLALNFSVFYYEILNSP++ACN+AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ  +A +AP
Sbjct:   17 MADRDTLVYKAKLAEQAERFDEMVTDMKEVARQPQELTVEERNLLSVAYKNVIGARRASWRVVTSIEQKGE-PDKLPTIKDYKAKIENELVDICNDILSIIEESLIRNSTSEEAKVFYYKMKGDYHRYLSEFQAGDSRKESATSALDAYQAASRIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACNIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAADAGDAP 255          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: F0YC30_AURAN (14_3_3 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC30_AURAN)

HSP 1 Score: 359 bits (921), Expect = 7.550e-119
Identity = 190/247 (76.92%), Postives = 208/247 (84.21%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL 750
            RDDLVY+AKLAEQAERFDEMV+HMK VA   +ELSVEERNLLSVAYKNVIGSRRASWRVISSIE K   S++  +I  YK KIETEL  IC DILKII ++LIPNS  +EGKVFYYKMKGDYHRYLAEFQ+ + R  S+SDALDAYQ AS +AN+DLPPTHPIRLGLALNFSVFYYEILNSP+RAC++AK AFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSD     EA     G  V D+
Sbjct:    5 RDDLVYLAKLAEQAERFDEMVEHMKTVAGYSEELSVEERNLLSVAYKNVIGSRRASWRVISSIEAKSD-SEKTAMITSYKKKIETELETICADILKIIATQLIPNSVGDEGKVFYYKMKGDYHRYLAEFQASEVRNKSSSDALDAYQEASRIANKDLPPTHPIRLGLALNFSVFYYEILNSPDRACHIAKQAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDNAVDVEASNAEGGGQVGDV 250          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A1Z5JP80_FISSO (14-3-3 protein epsilon n=4 Tax=Bacillariophycidae TaxID=33850 RepID=A0A1Z5JP80_FISSO)

HSP 1 Score: 357 bits (916), Expect = 3.480e-118
Identity = 185/235 (78.72%), Postives = 208/235 (88.51%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            R+ LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K    D++ +I+DYK+KIETEL +IC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ  D RK SAS ALDAYQ+AS +A+ DLPPTHPIRLGLALNFSVFYYEILNSP++AC +AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ E ++A
Sbjct:    3 REALVYKAKLAEQAERFDEMVSDMKDVARQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-PDKMTIIKDYKAKIETELVEICNDILSIIEDSLIPNSTSEEAKVFYYKMKGDYHRYLSEFQVGDTRKESASAALDAYQAASGIASSDLPPTHPIRLGLALNFSVFYYEILNSPDKACQIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQAEGDDA 236          
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Match: A0A1E7FAR9_9STRA (14-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FAR9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 3.480e-118
Identity = 185/235 (78.72%), Postives = 208/235 (88.51%), Query Frame = 1
Query:   10 RDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYKNVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKIIESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQSASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEA 714
            RD LVY AKLAEQAERFDEMV  MK VA+QP+EL+VEERNLLSVAYKNVIGSRRASWRV++SIE K   SD++ +I+DYKSKIE EL +IC+DIL IIE  LIPNSTSEE KVFYYKMKGDYHRYL+EFQ+ D RK SA  ALDAYQ+AS +A  DLPPTHPIRLGLALNFSVFYYEILN+P++AC++AK AFDDAIAELDTL+EESYKDSTLIMQLLRDNLTLWTSDQ +A+ A
Sbjct:    3 RDSLVYKAKLAEQAERFDEMVQDMKEVAKQPQELTVEERNLLSVAYKNVIGSRRASWRVVTSIEQKGD-SDKMEIIKDYKSKIECELVEICNDILGIIEESLIPNSTSEEAKVFYYKMKGDYHRYLSEFQTGDTRKESAGAALDAYQAASGIAQSDLPPTHPIRLGLALNFSVFYYEILNAPDKACSIAKQAFDDAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSDQADADGA 236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9623.17322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
1433_FUCVE4.830e-15895.6214-3-3-like protein n=3 Tax=Phaeophyceae TaxID=287... [more]
W7TWA9_9STRA1.490e-12680.0814-3-3-like protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A835YSI6_9STRA8.170e-12680.1614-3-3-like protein n=2 Tax=Tribonema minus TaxID=... [more]
A0A7S3IA22_9CILI8.450e-12582.91Hypothetical protein n=1 Tax=Fabrea salina TaxID=3... [more]
A0A8J2SJV0_9STRA2.620e-12277.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8BX06_THAPS4.200e-12080.4314-3-3-like protein n=3 Tax=Thalassiosirales TaxID... [more]
A0A7S1H1R2_9STRA5.730e-11978.33Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
F0YC30_AURAN7.550e-11976.9214_3_3 domain-containing protein n=1 Tax=Aureococc... [more]
A0A1Z5JP80_FISSO3.480e-11878.7214-3-3 protein epsilon n=4 Tax=Bacillariophycidae ... [more]
A0A1E7FAR9_9STRA3.480e-11878.7214-3-3 protein n=3 Tax=Bacillariaceae TaxID=33852 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9623contigH-paniculata_contig9623:689..4207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score480.7
Seed ortholog evalue4.1e-133
Seed eggNOG ortholog2880.D7FN58
KEGG koko:K06630
KEGG Pathwayko04011,ko04110,ko04114,ko04151,ko04390,ko04391,ko04722,ko05169,ko05203,map04011,map04110,map04114,map04151,map04390,map04391,map04722,map05169,map05203
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0031410,GO:0031982,GO:0042470,GO:0043226,GO:0043227,GO:0043229,GO:0044424,GO:0044444,GO:0044464,GO:0048770,GO:0097708
EggNOG free text desc.protein domain specific binding
EggNOG OGsCOG5040@1,KOG0841@2759
Ec32 ortholog description14-3-3-like protein
Ec32 orthologEc-06_008490.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400,ko04147
Exons5
Model size1587
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9623.17322.1prot_H-paniculata_contig9623.17322.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9623 1523..4207 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931194.1565492-UTR-H-paniculata_contig9623:688..15221622931194.1565492-UTR-H-paniculata_contig9623:688..1522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9623 689..1522 -
1691481632.6603627-UTR-H-paniculata_contig9623:688..15221691481632.6603627-UTR-H-paniculata_contig9623:688..1522Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9623 689..1522 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931194.1744895-CDS-H-paniculata_contig9623:1522..16931622931194.1744895-CDS-H-paniculata_contig9623:1522..1693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 1523..1693 -
1691481632.6746056-CDS-H-paniculata_contig9623:1522..16931691481632.6746056-CDS-H-paniculata_contig9623:1522..1693Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 1523..1693 -
1622931194.193832-CDS-H-paniculata_contig9623:1864..20661622931194.193832-CDS-H-paniculata_contig9623:1864..2066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 1865..2066 -
1691481632.683997-CDS-H-paniculata_contig9623:1864..20661691481632.683997-CDS-H-paniculata_contig9623:1864..2066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 1865..2066 -
1622931194.2054272-CDS-H-paniculata_contig9623:2315..24791622931194.2054272-CDS-H-paniculata_contig9623:2315..2479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 2316..2479 -
1691481632.6969213-CDS-H-paniculata_contig9623:2315..24791691481632.6969213-CDS-H-paniculata_contig9623:2315..2479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 2316..2479 -
1622931194.224424-CDS-H-paniculata_contig9623:3382..35421622931194.224424-CDS-H-paniculata_contig9623:3382..3542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 3383..3542 -
1691481632.7165318-CDS-H-paniculata_contig9623:3382..35421691481632.7165318-CDS-H-paniculata_contig9623:3382..3542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 3383..3542 -
1622931194.246359-CDS-H-paniculata_contig9623:4151..42071622931194.246359-CDS-H-paniculata_contig9623:4151..4207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 4152..4207 -
1691481632.7278264-CDS-H-paniculata_contig9623:4151..42071691481632.7278264-CDS-H-paniculata_contig9623:4151..4207Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9623 4152..4207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9623.17322.1

>prot_H-paniculata_contig9623.17322.1 ID=prot_H-paniculata_contig9623.17322.1|Name=mRNA_H-paniculata_contig9623.17322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
MTSRDDLVYMAKLAEQAERFDEMVDHMKAVAQQPKELSVEERNLLSVAYK
NVIGSRRASWRVISSIEGKDTVSDQLPLIRDYKSKIETELTDICDDILKI
IESELIPNSTSEEGKVFYYKMKGDYHRYLAEFQSMDDRKTSASDALDAYQ
SASELANQDLPPTHPIRLGLALNFSVFYYEILNSPERACNLAKAAFDDAI
AELDTLSEESYKDSTLIMQLLRDNLTLWTSDQGEAEEAPGNADGTVVEDL
*
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mRNA from alignment at H-paniculata_contig9623:689..4207-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9623.17322.1 ID=mRNA_H-paniculata_contig9623.17322.1|Name=mRNA_H-paniculata_contig9623.17322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3519bp|location=Sequence derived from alignment at H-paniculata_contig9623:689..4207- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTCCCGCGACGACCTCGTATACATGGCCAAGCTCGCTGAGCAGGC TGAACGGTGAGTAAATCGTGGGAGTGGTTTGCTTTTGGGAACAATCGAGG CTTCGGGTTTTGTAAGCATCAGTCGTTCAGGACTGAGGTGCCCAATGCAT TTCATATTGACTTGTAATTCAAGTACAGTCATCAACAGGAGATGACCTTC TGGGTTCCATCCGAAGGACTACTGTTCCAGAGACCATCGAGCAAAGCTTT AAGCTTCCGGACTTTCTATGCGTCGCGAACATGGATGGTCGGGTGCATGG CTTCTGCTGTGATTTGTCCTTCCTGAAAGCGATTATTATCACGTGCCTGT ACCGGCCCCTGAGAAAGGAAGTTGCTGGGTTGGGAAGGAAGAAGCTATAC AGTCGCGTGTTCAGTGATCTGTGGTCCAGTCTGTTGCGGTAGCCGTTCAT CATCCATGAACAAGTACGTTATACTCTTGACCGTTTATTCCGAGACCCAG AGGTTCCTATACAGGATGCATCTCGGCATCCTCGTCCTTACTTTCAGTTC GAATAGCTTATGTGGTGATTGTAGCACCATCTCCCTTCAGTCATTCTGAA CGGTGTTGGATGGTATCTGATGAGTTCTTGTCTCTGTGATGAACACTTGT CCTTCGCATGATCAGCTTCGATGAAATGGTGGACCACATGAAGGCTGTTG CTCAACAGCCCAAGGAGCTTTCGGTGGAGGAACGTAACCTGCTTTCGGTC GCGTACAAAAACGTGATCGGGTCGCGCCGCGCGTCTTGGAGAGTTATCAG CTCTATCGAGGGCAAAGACACTGTGGTGAGTGCCTGGCTTTCATATCTCA ATTCGGCACTTTAGAGAGGGGCGTTTGGAGTATTTTAAGGGACCATGTGT TGGTGTGGGCGGCATTGCAGTTGCCCGGCAGGTATGTTTTCCCTGCGCTC GGTGTTGGGGGCACATGTGAAGTCCTGCCCAATGCAGTGGTTCCTGCGCA ATGCAGTGGTTCCTCATACGCAGATGACCGATTTTGTTGCGAGTGCACAT ACCAAAGAGCTTCGGATGGAGTGCAATGCACGGGTGATGTCGATACAACG GAGTTGGCTGAGGTTTCCCCTACTGCGGAACCATGCTGCATACGTCATGC TTTTGCACATAGATGAACATGTAGACAAACTGTCCTGAAGTCGAGGTTGT AACTGAGGTTCACGGGCCATGCCGATGGCAAACGGATCAAGCCCTTGGGA CACATGAATTGTTTTCGTGTTACTGTGATCCGGTTAGAGTAAGGCATCAT AATGTAGGATTTTTTTATTCGACCTCACCCACCGTCACAAAAAAGCACTT CCTCACATGGACTTGACGTCATCTGATGCGTCGACCTGATCACGAAAGTA GGTGTATTTGCTGGTGACTTGCATCGTACTTATGTACCCTTCATTCTCGC AATGATGAGCGGGTCTACTGATGTATGATGTAGAAATTTATCTGCCAGCA TATGTTCGTGGTGATGAAGTGTAGTCGACTTCACTGCGACGTAGACGTCA CCGTCATCATGGCGAATATCGACTGGGCGACCGCCCGAAACTGAAACCTT GGAACTAATATGACGAGAAAGCGTCGTATGCGATTCAATTGTGTATTGTC AGACGTCATGATCACGTAGTTTGAAGACCAGACACTGATCAGTACCATCA TCTGGTTGGAATTATCTCGTATCCCCAGAGCGACCAGCTGCCGCTTATCC GTGACTACAAGTCGAAGATTGAGACGGAGCTGACCGACATCTGCGATGAC ATCCTGAAGATCATCGAGTCTGAACTTATCCCCAACTCCACCTCCGAGGA GGGCAAGGTGTTCTACTACAAGATGAAGGGTGACTACCACCGGTGAGCAT GCCCCACCATGGACACGTTTGACCGTGCACACTTAGGTTAGATCCACGAG TCGGGTGTCACCAATTTCGAGTGGGTCTAAACGGCACGAGCAGGTCGGCA CGTCTAGTCTCCTGTGAAAACCGAAATGTTTTTGAGATTCCCTGTCGATG CTGCTGCTACAGATTAGTTGTGTCGGAGAAAAAGAAAGAACCGAAATGTA GTACTCATCTTGTCGTATTACCCCTTGCGCAAATGTGGTAGATATCTGGC GGAGTTCCAGTCGATGGATGACCGGAAGACTAGTGCGTCAGATGCCCTGG ATGCGTATCAGTCAGCCTCGGAGTTGGCTAACCAAGACCTTCCACCAACA CACCCTATCCGGTTGGGGCTTGCCCTCAACTTCTCTGTGTTCTACTACGA GATCCTCAACTCTCCAGAGCGGGCGTGCAACTTGGCGAAGGCGGTAAGTT CAAGATCCCTGACAAATGCTAGTAGAAATTCAAGTGGGGAATATTTGTGT CGTTCGATTGGTTGTAGTGAAAAATTGTACCGTCTGTGAAATATAGTTAC TGCGGAGCTGAGCACAACGTTAATTATGGTTGACCCAGTATAACTGTTCG CCAAAATGAAACAGGCCTTCGACGACGCGATCGCAGAGCTCGACACCTTG TCGGAAGAGTCCTACAAGGACTCTACCCTCATCATGCAGTTGTTGAGGGA CAACCTTACGCTCTGGACATCAGACCAAGGAGAGGCAGAAGAGGCACCCG GGAATGCGGATGGCACTGTTGTCGAGGACCTTTAAGCTCTGTGCCCTTCG CGTGAAAAACGTTCCACACTTGTTATTAAATATGGTGTCTTTTGTTTATT TCACTGCGGCAAGTTGGCAGGGTGTAAGTTTTGTTTGTCGCGTCTAATCG CATTAGCTAGAAGGAGGGGAAGGAACGAGATGGTTTCTTTTCTGCGACTG CAAAGTATGTACAACAACCACTGCCTACTCTTTGTCGCTTTTACTAGGTT TTTGCATGTAGTGAATTAACAGGATGGGTAGGGTTTATTTGGGGGGGTAG GCGAAATGATATGTATTCCGATGGGTAGTGATAGCATATGTTGATGAAAT GACGTAGTGAGATGGCGTCTGTCTGAACTAGAGAGCTGCATGCGGGGTAA AGCTACTCTAGCTCTGAATAGATTAGGGTATCTGCAATTCGTTTAAGTTG ATGCAGGAGTAGTTCTCGACGTTTGAAAGTAGGGCACTGTTTGCTCGAAT AATCAAACCTCGATTTGAACCCTGGTTTGGGCAACAATCGTTTCTGTACT ACTATTCCGCTGAGTCATTTGGCAATCGTGTCGCTGAGAGCAACAGATGT TGAGCGCATTCAAGGTGTACAAAGCAGAGTAGGAAGGGAAAATATGTTCA CTCTACTTAATTTAATGTGTATGACTCGGACACTTGTCCAGTAATCTGTA TGGTCCATTATTTGACATGTGTTCAGGTGGACACTTTCCGATAATATTTC ACCGACACTCACCTATGTCGAGAGGAAAGAAATTTTTTTTTCATCATGAA CGAGAAACAATAATTTTCAACCCATCTAAGCAATGGGAAAAATAAATTTC CCATTTCAAATTTTCATCC
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Coding sequence (CDS) from alignment at H-paniculata_contig9623:689..4207-

>mRNA_H-paniculata_contig9623.17322.1 ID=mRNA_H-paniculata_contig9623.17322.1|Name=mRNA_H-paniculata_contig9623.17322.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig9623:689..4207- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTCCCGCGACGACCTCGTATACATGGCCAAGCTCGCTGAGCAGGC
TGAACGATGACTTCCCGCGACGACCTCGTATACATGGCCAAGCTCGCTGA
GCAGGCTGAACGCTTCGATGAAATGGTGGACCACATGAAGGCTGTTGCTC
AACAGCCCAAGGAGCTTTCGGTGGAGGAACGTAACCTGCTTTCGGTCGCG
TACAAAAACGTGATCGGGTCGCGCCGCGCGTCTTGGAGAGTTATCAGCTC
TATCGAGGGCAAAGACACTGTGCTTCGATGAAATGGTGGACCACATGAAG
GCTGTTGCTCAACAGCCCAAGGAGCTTTCGGTGGAGGAACGTAACCTGCT
TTCGGTCGCGTACAAAAACGTGATCGGGTCGCGCCGCGCGTCTTGGAGAG
TTATCAGCTCTATCGAGGGCAAAGACACTGTGAGCGACCAGCTGCCGCTT
ATCCGTGACTACAAGTCGAAGATTGAGACGGAGCTGACCGACATCTGCGA
TGACATCCTGAAGATCATCGAGTCTGAACTTATCCCCAACTCCACCTCCG
AGGAGGGCAAGGTGTTCTACTACAAGATGAAGGGTGACTACCACCGAGCG
ACCAGCTGCCGCTTATCCGTGACTACAAGTCGAAGATTGAGACGGAGCTG
ACCGACATCTGCGATGACATCCTGAAGATCATCGAGTCTGAACTTATCCC
CAACTCCACCTCCGAGGAGGGCAAGGTGTTCTACTACAAGATGAAGGGTG
ACTACCACCGATATCTGGCGGAGTTCCAGTCGATGGATGACCGGAAGACT
AGTGCGTCAGATGCCCTGGATGCGTATCAGTCAGCCTCGGAGTTGGCTAA
CCAAGACCTTCCACCAACACACCCTATCCGGTTGGGGCTTGCCCTCAACT
TCTCTGTGTTCTACTACGAGATCCTCAACTCTCCAGAGCGGGCGTGCAAC
TTGGCGAAGGCGATATCTGGCGGAGTTCCAGTCGATGGATGACCGGAAGA
CTAGTGCGTCAGATGCCCTGGATGCGTATCAGTCAGCCTCGGAGTTGGCT
AACCAAGACCTTCCACCAACACACCCTATCCGGTTGGGGCTTGCCCTCAA
CTTCTCTGTGTTCTACTACGAGATCCTCAACTCTCCAGAGCGGGCGTGCA
ACTTGGCGAAGGCGGCCTTCGACGACGCGATCGCAGAGCTCGACACCTTG
TCGGAAGAGTCCTACAAGGACTCTACCCTCATCATGCAGTTGTTGAGGGA
CAACCTTACGCTCTGGACATCAGACCAAGGAGAGGCAGAAGAGGCACCCG
GGAATGCGGATGGCACTGTTGTCGAGGACCTTTAAGCCTTCGACGACGCG
ATCGCAGAGCTCGACACCTTGTCGGAAGAGTCCTACAAGGACTCTACCCT
CATCATGCAGTTGTTGAGGGACAACCTTACGCTCTGGACATCAGACCAAG
GAGAGGCAGAAGAGGCACCCGGGAATGCGGATGGCACTGTTGTCGAGGAC
CTTTAA
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