Homology
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE)
HSP 1 Score: 460 bits (1183), Expect = 2.420e-161
Identity = 218/245 (88.98%), Postives = 236/245 (96.33%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
VRILRSL HPNVIDIYQFF+DDPD+YYV+IE+MRGGELFDRIV+KA+YNEKEARDLCRILLDAV+YCHD GIVHRDLKPENLLLTSQHDDANVKLADFGFARS++ G+VSTQCGTPGYVAPEIL+AE+YGTSVDMWSIGVI+YILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYW S S+EA+DLIR+LLTVDPKKRLTA AVTHPWLLSKD DLL +NLGVNLEQL+LFNARRKLRAAIKSV
Sbjct: 107 VRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGGFVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKKRLTAAQAVTHPWLLSKDDDLLKHNLGVNLEQLRLFNARRKLRAAIKSV 351
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA)
HSP 1 Score: 394 bits (1013), Expect = 9.080e-136
Identity = 187/245 (76.33%), Postives = 214/245 (87.35%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
V+ILR LNHPN+IDIYQF++ + D+YYV IE+MRGGELFDRIV+K +Y EKEARDLC+ILLDA+KYCHD IVHRDLKPENLLLTS DDA++KLADFGFA+++ V+TQCGTP YVAPEIL+ YGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKI+AG F+FH EYWGS+S++A+DLI +LLTVD RLTA AV+HPWLL+ DTDL NLG NLEQLKLFNARRKLRAAIKSV
Sbjct: 89 VKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGSMVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVDQHSRLTAREAVSHPWLLTSDTDLAARNLGKNLEQLKLFNARRKLRAAIKSV 333
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)
HSP 1 Score: 390 bits (1002), Expect = 1.910e-133
Identity = 184/245 (75.10%), Postives = 210/245 (85.71%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
VRILR L H NV+ IYQFFQDDPD+YY+ +E M GGELFDRIVQK+YYNE+EARDLCR+LLD+V+YCH+ GIVHRDLKPENLLLTS+HDDA +KLADFGFA SVL G VS QCG+PGYVAPEIL+A YGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW + S EA+DLIRKLL VDP KR+TA A HPWLL+ L +NLG NL+QL++FNA RKLR AI+SV
Sbjct: 131 VRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGASLAGHNLGKNLDQLRIFNATRKLRGAIQSV 375
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A6H5KCN7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN7_9PHAE)
HSP 1 Score: 346 bits (888), Expect = 1.850e-118
Identity = 164/218 (75.23%), Postives = 187/218 (85.78%), Query Frame = 1
Query: 82 VAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
+ +E M GGELFDRIVQK YYNE+EARDLCR+LLD+VKYCH+ GIVHRDLKPENLLLTS+HDDA +KLADFGFA SVL G VS QCG+PGYVAPEIL+A YGTSVDMWS+GVIIY LLGGYPPFHDENQTRLFR+IKAG+FKFH EYW + S EA+DLIRKLL VDP KR+TA A HPWLL+ L ++NLG NL+QL++FNA RKLR AI+SV
Sbjct: 1 MVLENMAGGELFDRIVQKTYYNEEEARDLCRVLLDSVKYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGPVSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAKRMTATQAAEHPWLLTTGESLASHNLGKNLDQLRIFNATRKLRGAIQSV 218
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
D8LEF0_ECTSI (Myosin light chain kinase (MLCK) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF0_ECTSI)
HSP 1 Score: 357 bits (916), Expect = 1.440e-116
Identity = 165/243 (67.90%), Postives = 201/243 (82.72%), Query Frame = 1
Query: 7 ILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
I+R L+HPN++ IY F+QDDP +Y+ +E M GGELFDRIVQK YYNE EARD+C L+A+KY H G+VHRDLKPENLLL S+ DD++++LADFGFA SVL GYV+ QCGTPGYVAPEIL++ YGTSVDMWSIGVIIYI+L GYPPFHDE+Q RL+RKIKAG+++F PEYW VS+EA+DLIRKLLTVDP +RLTA A HPWL + +L ++LG LE+LK+FNA RKLRAAI+SV
Sbjct: 429 IMRELDHPNLVSIYDFYQDDPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTFLEAMKYTHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRSRPYGTSVDMWSIGVIIYIILAGYPPFHDEDQNRLYRKIKAGHYRFDPEYWNDVSSEAKDLIRKLLTVDPTRRLTAAEACEHPWLSTARGNLTQHDLGAGLEKLKIFNATRKLRAAIRSV 671
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA)
HSP 1 Score: 338 bits (866), Expect = 3.320e-113
Identity = 161/246 (65.45%), Postives = 192/246 (78.05%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGY-VSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
V IL+ ++HPN+I +Y+FF++ YY+ IE M GGELFDRIVQK YYNEKEARDL ILL A+K+CHD GIVHRDLKPENLLLTS DDA++K+ADFGFAR V + ++TQCGTPGYVAPEIL YG +VDMWSIGVI YILLGGYPPFHDE Q+ LF KI+AG+F FHPEYW VS EA+DLIRKLLTVDP KR+TA A+ HPW+ D L NL L +L+ FNARRK R+ +K++
Sbjct: 76 VTILKHVDHPNIIKLYEFFEEK-HFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTTQCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNKRITAAEAMQHPWVTGADETLAARNLDSQLRELRRFNARRKFRSGVKAI 320
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A6H5K8I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I6_9PHAE)
HSP 1 Score: 346 bits (888), Expect = 2.700e-112
Identity = 160/243 (65.84%), Postives = 198/243 (81.48%), Query Frame = 1
Query: 7 ILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
I+ LNHPN++ IY F++D+P +Y+ +E M GGELFDRIVQK YYNE EARD+C +L+A+KY H G+VHRDLKPENLLL S+ DD++++LADFGFA SVL GYV+ QCGTPGYVAPEIL+ YGTSVDMWSIGVIIYI+L GYPPF DE+Q RL+RKIKAG+++F PEYW VS+EA+DLIRKLL VDP +RLTA A HPWL + +L ++LG LE+LK+FNA RKLRAAI++V
Sbjct: 424 IMHELNHPNLVTIYDFYRDNPKFFYMVLELMEGGELFDRIVQKQYYNEAEARDVCLTILEAIKYIHGQGVVHRDLKPENLLLASKSDDSSIRLADFGFAVSVLDGYVTDQCGTPGYVAPEILRGHPYGTSVDMWSIGVIIYIILAGYPPFCDEDQHRLYRKIKAGHYRFEPEYWNDVSSEAKDLIRKLLIVDPTRRLTAAEACEHPWLSTARGNLTKHDLGAGLEKLKIFNATRKLRAAIRTV 666
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA)
HSP 1 Score: 317 bits (812), Expect = 2.250e-106
Identity = 146/240 (60.83%), Postives = 188/240 (78.33%), Query Frame = 1
Query: 16 SLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
LNHPN+I+ Y FF+++ + YYV +E+M GGELFDRIV+K YNEKEARD+ +IL+ A+KYCHD +VHRDLKPENLLLTS+ DDA++K+ADFGFA V +STQCGTPGY+APEIL+ + YG +VDMWSIGVI YI+LGGYPPFHD+N LFRKI+ G+F+FHPEYW +VS++A++LI+ LLTV+ RLTA + HPWL++ D L NL NL + K FNA R+ + A K+V
Sbjct: 1 QLNHPNIINCYDFFEEEKN-YYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFAVRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNASARLTADQVLQHPWLMTDDATLAAINLDSNLAEFKKFNAARRFKGAAKAV 239
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK)
HSP 1 Score: 318 bits (814), Expect = 1.020e-105
Identity = 149/245 (60.82%), Postives = 189/245 (77.14%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
V ILR ++HPN+I ++ FF++ YY+ E M+GGELFDRIV+K +YNEKEARDL +ILL AVKYCHD IVHRDLKPENLLL+S DDA++K+ADFGFAR + ++TQCGTPGYVAPEIL YG SVDMWS GVI YILLGGYPPFHDE Q+ LF KI++G+++FHPEYW +VS +A+DLI+K+LTVD +R+TA A HPW+ + L L NL +L+ FNARRK R+ +K++
Sbjct: 78 VTILRGISHPNIIKLFDFFEEK-HFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLLRGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQRITAEAACNHPWVQADADVLAKRGLDGNLTELRRFNARRKFRSGVKAI 321
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Match:
A0A8J2S556_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S556_9STRA)
HSP 1 Score: 317 bits (812), Expect = 1.690e-105
Identity = 147/245 (60.00%), Postives = 188/245 (76.73%), Query Frame = 1
Query: 1 VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNEKEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGFARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLTAGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV 735
V +LRS++HPN++ +Y FF D+ +YY+AIE M GGELF+RIV+K +YNE +AR L RILLDA+ Y H GIVHRDLKPENLLL S +D ++KLADFGFA+ V + TQCGTPGYVAPEILK + YGT+VDMWS GVI+YILLGGYPPFHD+N L+RKIKA ++ F P+YW VS +A+DLI+K+L VDP KRLTA A+ HPW + D +L++ NL L+ +K FNARRK + +K +
Sbjct: 74 VAVLRSVDHPNIVKLYDFF-DEKRYYYMAIELMEGGELFERIVKKTFYNEMDARGLVRILLDALAYLHHRGIVHRDLKPENLLLKSPFNDFDIKLADFGFAKKVEGKSLDTQCGTPGYVAPEILKGKKYGTAVDMWSCGVIVYILLGGYPPFHDDNHAVLYRKIKAADYAFDPQYWDQVSDDAKDLIKKMLVVDPDKRLTASQALRHPWFMVGDHELISRNLAKTLDTMKKFNARRKFKGKVKGI 317
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9619.17317.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.42e-161 / Id = 88.98 Expect = 9.08e-136 / Id = 76.33 Expect = 1.91e-133 / Id = 75.10 Expect = 1.85e-118 / Id = 75.23 Expect = 1.44e-116 / Id = 67.90 Expect = 3.32e-113 / Id = 65.45 Expect = 2.70e-112 / Id = 65.84 Expect = 2.25e-106 / Id = 60.83 Expect = 1.02e-105 / Id = 60.82 Expect = 1.69e-105 / Id = 60.00 Sequence A0A6H5K8A8_9PHAE A0A835YZ60_9STRA D8LK21_ECTSI A0A6H5KCN7_9PHAE D8LEF0_ECTSI A0A7S2XV40_9STRA A0A6H5K8I6_9PHAE A0A7S0SZL7_9STRA A0A6V1U2B4_HETAK A0A8J2S556_9STRA
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 319.7
Seed ortholog evalue 1.2e-84
Seed eggNOG ortholog 2880.D8LE50
KEGG ko ko:K04373,ko:K04445
KEGG Pathway ko04010,ko04114,ko04150,ko04261,ko04668,ko04713,ko04714,ko04720,ko04722,ko04914,ko04931,ko05200,ko05206,ko05219,map04010,map04114,map04150,map04261,map04668,map04713,map04714,map04720,map04722,map04914,map04931,map05200,map05206,map05219
Hectar predicted targeting category other localisation
EggNOG free text desc. protein serine/threonine kinase activity
EggNOG OGs KOG0603@1,KOG0603@2759
EC 2.7.11.1
COG Functional cat. G
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko01000,ko01001,ko03019
Exons 4
Model size 737
Cds size 735
Stop 0
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9619.17317.1
>prot_H-paniculata_contig9619.17317.1 ID=prot_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=245bp
VRILRSLNHPNVIDIYQFFQDDPDHYYVAIEFMRGGELFDRIVQKAYYNE KEARDLCRILLDAVKYCHDFGIVHRDLKPENLLLTSQHDDANVKLADFGF ARSVLKGYVSTQCGTPGYVAPEILKAEAYGTSVDMWSIGVIIYILLGGYP PFHDENQTRLFRKIKAGNFKFHPEYWGSVSTEARDLIRKLLTVDPKKRLT AGGAVTHPWLLSKDTDLLNNNLGVNLEQLKLFNARRKLRAAIKSV back to top mRNA from alignment at H-paniculata_contig9619:1274..4349+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9619.17317.1 ID=mRNA_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3076bp|location=Sequence derived from alignment at H-paniculata_contig9619:1274..4349+ (Halopteris paniculata Hal_grac_a_UBK monoicous)GTCCGAATCCTCCGATCGTTGAATCACCCAAATGTGATCGACATCTATCA
ATTCTTCCAGGACGATCCCGACCACTACTACGTGGCCATCGAGTTCATGA
GAGGTGGCGAGCTATTCGACCGCATCGTACAGAAG GTAGCTTATTTGTGG
AAAATAACGCAAATACGATATAAAGCCATAATATAAGGTCCTCGTTTCAG
AAAAAAAAACCCCGACCATATTGCCTAATAACCATGGAAAATGAGCATGA
TGTACGTTATATTTGTGAGTGAGCGCAGTGATTGAATCCTCGTGGGTGGG
TCTCGGCTTGTTTGTTGATTGATTCGTTTGTTTGTTTTTTTCCCAGTTTT
TAACCCTTTGAACCGTTGGGATCATGGGTGAATATTTTAGTGTTGGTATA
AACAGATTGAGCGGGATTCAGGAACTCTAGGAACGTGCTCTCTGCATGTA
CTAGATGGAAATTGATTGGAAGCCTGCTGTGTTTTTTAGTGGTTGTTGTA
TGTTTTCGCAACCAGATTCACAGCTCTTCCCCTCCTGTCCCTTCTGTTAT
TGAAAAAAAAAAGAACTTTTTGACTATCCAAAGCTACATGAATGTGGTAT
ATTCATTCCCGTATTGATTTCATTTTTCTTATTAATTCTATACAATTGAA
GGTTGAGGCCGTGAGCTGTGTAACATCAACATGGGTATAAAGGAGTTATT
ATATTAGCATCAGAGATCAGTTGTGCTCACTGTGGTAGAAGTGGAATGAC
TTGATATTCAATATACAATACCCCCCCCCCCCCCCCTCCCTCGCGCTATC
TCTCCTGCCGTCGCCCTGAAAAAAAAAACGTACAAAAAGGCATACTACAA
CGAAAAGGAGGCGAGAGATCTATGCCGTATCCTCCTGGACGCGGTGAAGT
ATTGCCACGACTTCGGCATTGTGCACCGCGACCTGAAACCCGAGAATTTG
CTGCTGACGTCGCAGCATGATGACGCGAATGTGAAGCTCGCCGACTTCGG
GTTCGCCCGCAGCGTGCTCAAGGGTTACGTGTCGACGCAGTGCGGGACGC
CTGGGTACGTGGCGCCGGAGATCCTCAAGGCGGAGGCCTACGGCACG GTA
AGTAGTGGTGATACAGGGCGTAATTAGTACCTCCCCTCTATTACTATTTA
AGGATTCTACGGGGTAGAAATTGGCCTAAAAACATGAAGGCTGAGATATA
TGGGGTACGTGAAATATTTTTGAGTCACATTTGGCAACGTAGGAAAAAGC
GAATAGCCATCGAACCTGTCCTGATAGGACGAAAGCTACGTTCGCCGGAG
AACGTGTGGTCGATGGTCTAACCATCACGACATGGGAAACATGAGTATGC
CGCTCTCCCCCCACACCTTCTTGTTGTTTGCTAATGGTGATTTCAAATTT
GGAGTGGAGTGTGAGTGTATGCCCATTTTTTTCAGTTTAGCACGTTTTGT
GACCAGTTCGACTTGCCACCAGGCATGCTCACGTACTTGCTGAAAACAAA
GTTCTGCCTAGAATTGGCTAATAATACCTTTCTGACCCCTCGCCCCCCCC
CACTTACGCTCTAAAGTCGGTCGACATGTGGAGCATCGGGGTCATCATTT
ACATCCTCCTGGGCGGGTACCCTCCTTTCCACGACGAGAACCAAACGCGC
CTGTTTAGGAAAATAAAGGCTGGAAATTTCAAGTTCCACCCGGAGTACTG
GGGGTCCGTCTCGACCGAAGCACGG GTGAGTTACCGTAGCCAACCGTATC
GTCAATTCTTTTAGTCATCGGACGAGGTGTAGGTAGGGTTGAGGGCCCGG
AATAGGCCTCCGGCCGGTCCGTCCTTCCCCCCCCTCCCTTCCCCTAGTTT
TGTTCATTTTGTGAATAGGTAAATCTAGCAAGCTGGAATATACTGAACGT
ACCTCAGGTTTGTTTTGTTTTGTTTTGTTTTTACGGTACTGGTAGTTTTC
GTATTTCTATATTACAGTGTTTGAGACCCTTTTGAAGCTACGTTGGACTC
ATATTTTGTTCTTGTTGCGACTCTTTTTTTTGTATTTTTTTCCAAACGGT
ATTCTCATAGTGCAGAAGACGCTATCATTTTGTGATAAAAGTTGTCCTCG
ACCATTGGTGCATGTTCTGGTGTCGCTATGTTGTAGTTGCATTTGCGTTG
CCCAGCGGCTCTTCAAGAAGGCGTATTCGTTTTGTATTTGTGAATGTCCG
TGAGACCTCGCCCGAAAACCAGAGGTTATGCGTAGCGTTAGCTCTATGAG
TTACCGAGGCTAACTGTTGTCCACGGGGATGCCGGGAATCGCGGTATCAC
TAGGGTAATAATGTAATAATGACTTGTGAATCGAGAACCAGAGGAACAAA
TAATATTGATATTGGTGTCTTTCGCAATATATAGTTTCAAGATCAAACTC
ATCGTCAGATAAAGACTGACTTGGAGGTCCTCTAAAAGTCCCCAGCACTG
GCCTGCCACCCTCTACTTGGCTCCGAATCAACGACTGCGGCGCCCTCTGT
TTTCAATGGTCGTGGATCTTAGATTGGCGGCAAGTCGCCTATAACCTCAA
GTTCTGATTAGGCTTGGTACCGAAAAAGGGTGAATCGATTAACAACCGCA
CCTAGTTTCGGACATAGTATGGTAGGTGGGTTTATGCCACCCTAATTATT
GGAAGCCTGTTCACTTCCAATGGGATTCCCCAGGATTTTCGCCTGTTAGG
TGTGAATATTGTGGGTGCGGCGATGGCACCATGTGGTTCTTTTCTTCCTT
TCGTTCCTCTTTGGCAATTTGGTAATTTTATCTTGAGTAGATCCTTTGTA
TATTGTGAGGTTCACTTTGTTTGACCTTTTAATAATGTTGCCAACGTTTG
GTTCTGCCATTGATGAATTTAACCATTATGGATTGCTATTTAGGACCTCA
TCCGCAAGCTTCTGACAGTGGACCCCAAGAAGAGGCTGACGGCAGGGGGC
GCAGTAACACACCCATGGCTGTTGAGCAAAGACACGGACCTTCTGAACAA
CAATCTGGGCGTCAACCTGGAGCAACTGAAGCTGTTCAACGCGCGTCGTA
AGCTGCGCGCGGCGATCAAGTCGGTG back to top Coding sequence (CDS) from alignment at H-paniculata_contig9619:1274..4349+
>mRNA_H-paniculata_contig9619.17317.1 ID=mRNA_H-paniculata_contig9619.17317.1|Name=mRNA_H-paniculata_contig9619.17317.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1470bp|location=Sequence derived from alignment at H-paniculata_contig9619:1274..4349+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GTCCGAATCCTCCGATCGTTGAATCACCCAAATGTGATCGACATCTATCA ATTCTTCCAGGACGATCCCGACCACTACTACGTGGCCATCGAGTTCATGA GAGGTGGCGAGCTATTCGACCGCATCGTACAGAAGGTCCGAATCCTCCGA TCGTTGAATCACCCAAATGTGATCGACATCTATCAATTCTTCCAGGACGA TCCCGACCACTACTACGTGGCCATCGAGTTCATGAGAGGTGGCGAGCTAT TCGACCGCATCGTACAGAAGGCATACTACAACGAAAAGGAGGCGAGAGAT CTATGCCGTATCCTCCTGGACGCGGTGAAGTATTGCCACGACTTCGGCAT TGTGCACCGCGACCTGAAACCCGAGAATTTGCTGCTGACGTCGCAGCATG ATGACGCGAATGTGAAGCTCGCCGACTTCGGGTTCGCCCGCAGCGTGCTC AAGGGTTACGTGTCGACGCAGTGCGGGACGCCTGGGTACGTGGCGCCGGA GATCCTCAAGGCGGAGGCCTACGGCACGGCATACTACAACGAAAAGGAGG CGAGAGATCTATGCCGTATCCTCCTGGACGCGGTGAAGTATTGCCACGAC TTCGGCATTGTGCACCGCGACCTGAAACCCGAGAATTTGCTGCTGACGTC GCAGCATGATGACGCGAATGTGAAGCTCGCCGACTTCGGGTTCGCCCGCA GCGTGCTCAAGGGTTACGTGTCGACGCAGTGCGGGACGCCTGGGTACGTG GCGCCGGAGATCCTCAAGGCGGAGGCCTACGGCACGTCGGTCGACATGTG GAGCATCGGGGTCATCATTTACATCCTCCTGGGCGGGTACCCTCCTTTCC ACGACGAGAACCAAACGCGCCTGTTTAGGAAAATAAAGGCTGGAAATTTC AAGTTCCACCCGGAGTACTGGGGGTCCGTCTCGACCGAAGCACGGTCGGT CGACATGTGGAGCATCGGGGTCATCATTTACATCCTCCTGGGCGGGTACC CTCCTTTCCACGACGAGAACCAAACGCGCCTGTTTAGGAAAATAAAGGCT GGAAATTTCAAGTTCCACCCGGAGTACTGGGGGTCCGTCTCGACCGAAGC ACGGGACCTCATCCGCAAGCTTCTGACAGTGGACCCCAAGAAGAGGCTGA CGGCAGGGGGCGCAGTAACACACCCATGGCTGTTGAGCAAAGACACGGAC CTTCTGAACAACAATCTGGGCGTCAACCTGGAGCAACTGAAGCTGTTCAA CGCGCGTCGTAAGCTGCGCGCGGCGATCAAGTCGGTGGACCTCATCCGCA AGCTTCTGACAGTGGACCCCAAGAAGAGGCTGACGGCAGGGGGCGCAGTA ACACACCCATGGCTGTTGAGCAAAGACACGGACCTTCTGAACAACAATCT GGGCGTCAACCTGGAGCAACTGAAGCTGTTCAACGCGCGTCGTAAGCTGC GCGCGGCGATCAAGTCGGTG back to top