prot_H-paniculata_contig950.17240.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig950.17240.1
Unique Nameprot_H-paniculata_contig950.17240.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length95
Homology
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BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Match: D8LEM0_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.640e-11
Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0 
Query:    1 KADQAAAELSQVLRKERAGQARIADAQSEAEELRGEMDSMKETFSRHRNVVRKXXXXXXXXXXXXXXXXXXXQSLTLEAEKQSTRHQQITADAA 94
            KAD+ A EL+QVLR+ERAGQ+ IADAQ E  +L+       + F++HR VVRK                    SL+LEA+KQS+RH Q +A+AA
Sbjct:  195 KADRNATELAQVLRRERAGQSSIADAQVEVGDLKAXXXXXXDAFAKHRGVVRKSQEVIDVHEKALKDARSKLLSLSLEADKQSSRHHQASAEAA 288
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BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Match: A0A6H5KZW7_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW7_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.190e-10
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0 
Query:    1 KADQAAAELSQVLRKERAGQARIADAQSEAEELRGEMDSMKETFSRHRNVVRKXXXXXXXXXXXXXXXXXXXQSLTLEAEKQSTRHQQITADAA 94
            KAD+ A EL+QVLR+ERAGQ+ IADAQ E  +L+ E+  M++ F++   VVRK                    SL+LEA+KQS+RH Q +A+AA
Sbjct:   89 KADRNATELAQVLRRERAGQSSIADAQVEVGDLKAELAEMRDAFAK--GVVRKSQEVINAHEKALKNARSELLSLSLEADKQSSRHHQASAEAA 180
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig950.17240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM0_ECTSI3.640e-1145.74PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZW7_9PHAE3.190e-1045.74PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..43
NoneNo IPR availableCOILSCoilCoilcoord: 51..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig950contigH-paniculata_contig950:13382..14361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig950.17240.1mRNA_H-paniculata_contig950.17240.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig950 13380..14361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig950.17240.1 ID=prot_H-paniculata_contig950.17240.1|Name=mRNA_H-paniculata_contig950.17240.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp
KADQAAAELSQVLRKERAGQARIADAQSEAEELRGEMDSMKETFSRHRNV
VRKNQEVIESHENALQNARSELQSLTLEAEKQSTRHQQITADAAA
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