mRNA_H-paniculata_contig9468.17214.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9468.17214.1
Unique NamemRNA_H-paniculata_contig9468.17214.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A6H5KZU9_9PHAE (Protein O-GlcNAc transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZU9_9PHAE)

HSP 1 Score: 671 bits (1732), Expect = 9.990e-231
Identity = 328/387 (84.75%), Postives = 356/387 (91.99%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADE--LIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVDEAGATGV 1155
            +R+GYVSSDLGNHPLSHLMQSVFGMHDRT+FEVKCYALS  D SVWR KIEGESEHFC+VS LQNG+VAR+IH DGIDILINLNGYTKGARNEIFALQPAP+Q  VSY+GFCGTLGA+YMQYMIADE +VP ESR+FYTE ++YMPHSYFVNDHKQSARYVLDRT LPTRA YGVPEDRFVLCNFNQLYKMDPAIF+TWM+VL+RVPNAVLWLLRFPPAGE+NIR EAR RGVR+EQLHFTDVA KEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLT+AGSKMATRVA SLLKAA A+   LIV +LEEYEE AV+LATD E+LF+IRSRLEE RHSCPLFDTQRWV+NMEAGLA+AHERFQAGL PED++V D  G T V
Sbjct:  616 IRIGYVSSDLGNHPLSHLMQSVFGMHDRTRFEVKCYALSANDDSVWRRKIEGESEHFCDVSGLQNGDVARLIHADGIDILINLNGYTKGARNEIFALQPAPLQ--VSYMGFCGTLGADYMQYMIADEIIVPRESRRFYTENILYMPHSYFVNDHKQSARYVLDRTLLPTRATYGVPEDRFVLCNFNQLYKMDPAIFSTWMSVLKRVPNAVLWLLRFPPAGEANIRMEARKRGVREEQLHFTDVATKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTMAGSKMATRVAPSLLKAAGAEGAGLIVESLEEYEERAVSLATDPEKLFEIRSRLEESRHSCPLFDTQRWVRNMEAGLAMAHERFQAGLDPEDLKVEDTVGPTPV 1000          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: K3X4T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4T5_GLOUD)

HSP 1 Score: 561 bits (1445), Expect = 1.140e-196
Identity = 259/378 (68.52%), Postives = 318/378 (84.13%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFGMH ++KFEV CY+ +P D SVWR KI  E EHF ++S + NG+ AR+IH+DGI ILINLNGYTKGARNEIFAL+PAPVQ  VSY+GFCGTLGA+Y+QYM+ D TVVP E R++++EK+++MPHSYFVNDHKQSAR VLD  + PTRAHYGVPED+FV CNFNQ+YK+DP  F TWM +L+RVPN++LWLLRFPP  E+NIR EA+ RG++  +LHFTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+A  +MA RVA+SLLKAA   ++I  +LEEYEELAVALA+D ++L+++R RLE+ R  CPLFDTQRWVQN+E GL +A +R + G  P+ I + D
Sbjct:   93 LRIGYVSSDLGNHPLAHLMQSVFGMHTKSKFEVFCYSTTPDDGSVWRRKIASEVEHFKDISMISNGDAARLIHSDGIHILINLNGYTKGARNEIFALKPAPVQ--VSYMGFCGTLGADYIQYMVGDATVVPKEHRRYFSEKIIHMPHSYFVNDHKQSARDVLDVEKCPTRAHYGVPEDKFVFCNFNQVYKIDPQTFTTWMNILKRVPNSILWLLRFPPIAEANIRAEAKARGIKSHRLHFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMITMAKDRMACRVASSLLKAANLSDMITQSLEEYEELAVALASDMDKLWEVRRRLEDDRLKCPLFDTQRWVQNLETGLTLAWDRHETGHEPDHIDIPD 468          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A8K1FGH6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH6_PYTOL)

HSP 1 Score: 567 bits (1461), Expect = 2.040e-192
Identity = 263/378 (69.58%), Postives = 322/378 (85.19%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFG HD+ +FEV CY+ +P D S+WR KI GE EHF +VS + NG+ A++IH DGI IL+NLNGYTKGARNEIFAL+PAP+Q  VSY+GFCGTLGA+Y+QYMI D  VVPPE R++++EK++ MPHSYFVNDHKQSAR VLD  + P+RAHYGVPED+FV CNFNQ+YK+DPA F TWM VL+RVPN++LWLLRFPP  E+N+R EAR +GV+D +LHFTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MA+RVA+SLLKAA   +LI  TL+EYEELAVALA+D ++L+++R RLE+GR +CPLFDT RWVQNMEAGL +A +R +AGL P+ I + D
Sbjct:  573 LRIGYVSSDLGNHPLAHLMQSVFGFHDKKQFEVFCYSTTPDDGSIWRRKIMGEVEHFKDVSMMNNGDAAKLIHADGIHILVNLNGYTKGARNEIFALKPAPIQ--VSYMGFCGTLGADYVQYMIGDAVVVPPEHRRYFSEKIINMPHSYFVNDHKQSARDVLDVEKCPSRAHYGVPEDKFVFCNFNQVYKIDPATFRTWMNVLKRVPNSILWLLRFPPLAEANLRAEARAQGVKDNRLHFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMASRVASSLLKAADLSDLITTTLDEYEELAVALASDKDKLWEVRCRLEDGRLTCPLFDTARWVQNMEAGLRMAWDRHEAGLEPDHIDIPD 948          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A3R7HUL3_9STRA (Protein O-GlcNAc transferase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A3R7HUL3_9STRA)

HSP 1 Score: 563 bits (1451), Expect = 4.880e-191
Identity = 269/379 (70.98%), Postives = 316/379 (83.38%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDE-QLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFGMHD  KFEV CYA SP D SVWR KI    EHF ++ +L NG+ AR IH DGI +LINLNGYTKGARNEIFALQPAPVQ  VSY+GFCGTLGA+Y+QYM+ D TVVPPE R+++TEK + MPHSYFVNDHKQSAR VLD  + P+RA YGVPED+FV CNFNQ+YK+DP  F TWM +L+RVPN+VLWLLRFPP  E+NIR EAR RGV+D+ +L FTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+A  +MATRVA+SLL+AA   ELI ++LEEYEELAVALA+D +RL+++R RLE+ R  CPLFDTQRWV+N+E GL +A ER + GL P+ I V D
Sbjct:  506 LRIGYVSSDLGNHPLAHLMQSVFGMHDTNKFEVFCYATSPDDGSVWRQKISNSIEHFTDICALSNGDAARTIHADGIHVLINLNGYTKGARNEIFALQPAPVQ--VSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPSRADYGVPEDKFVFCNFNQVYKIDPLTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMARDRMATRVASSLLRAANMSELITNSLEEYEELAVALASDMDRLWELRRRLEDERERCPLFDTQRWVRNLETGLCMAWERHENGLAPDHIDVPD 882          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: D0NXA5_PHYIT (Protein O-GlcNAc transferase n=2 Tax=Phytophthora TaxID=4783 RepID=D0NXA5_PHYIT)

HSP 1 Score: 561 bits (1445), Expect = 7.270e-190
Identity = 266/379 (70.18%), Postives = 316/379 (83.38%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDE-QLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFGMHD  K+EV CYA SP D S+WR +I G  EHF ++ +L NG+ AR IH DGI +L+NLNGYTKGARNEIFALQPAPVQ  VSY+GFCGTLGA+Y+ YM+ D TVVPPE R+++TEK + MPHSYFVNDHKQSAR VLD  + PTRA YGVPED+FV CNFNQ+YK+DP  F TWM +L+RVPN+VLWLLRFPP  E+NIR EAR RGV+D+ +L FTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MATRVA+SLL+AA   ELI ++LEEYEELAVALA+D +RL+++R RLEE R +CPLFDTQRWV+N+E GL +A ER + GL P+ I V D
Sbjct:  570 LRIGYVSSDLGNHPLAHLMQSVFGMHDERKYEVFCYATSPDDGSIWRKQISGSVEHFVDICALSNGDAARTIHADGIHVLVNLNGYTKGARNEIFALQPAPVQ--VSYMGFCGTLGADYIHYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAANMSELITNSLEEYEELAVALASDMDRLWELRRRLEEERLNCPLFDTQRWVRNLETGLCMAWERHENGLAPDHIDVPD 946          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A2D4BUC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUC4_PYTIN)

HSP 1 Score: 563 bits (1451), Expect = 1.850e-188
Identity = 263/378 (69.58%), Postives = 319/378 (84.39%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFG HD+ KFEV CY+ +P D S+WR KI  E EHF ++S + NG+ AR+IH+DGI +L+NLNGYTKGARNEIFAL+PAPVQ  VSY+GFCGTLGA+Y+ YMI D  VVP E R+F++EKM+ MPHSYFVNDHKQSAR VLD  + PTRAHYGVPE++FV CNFNQ+YK+DPA F TWM +L+RVPN++LWLLRFPP  E+N+R EAR +GV+D +LHFTDVAPK+ H+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MA+RVA+SLLKAA  DE+I  +LEEYEELAVALA+D ++L++IR RLE+GR +CPLFDT RWV+NME GL +A ER +AGL P+ I V D
Sbjct:  581 LRIGYVSSDLGNHPLAHLMQSVFGFHDKRKFEVFCYSTTPDDGSIWRRKISSEVEHFKDISLMSNGDAARLIHSDGIHVLVNLNGYTKGARNEIFALKPAPVQ--VSYMGFCGTLGADYVHYMIGDAVVVPREHRRFFSEKMINMPHSYFVNDHKQSARDVLDVDKCPTRAHYGVPENQFVFCNFNQVYKIDPATFRTWMNILKRVPNSILWLLRFPPIAEANLRAEARAQGVKDSRLHFTDVAPKDXHLKRGYLADLFLDTPXCNAHTTGCDILWGGTPMITMPKDRMASRVASSLLKAAMLDEMITSSLEEYEELAVALASDLDKLWEIRRRLEDGRLTCPLFDTARWVKNMETGLVMAWERHEAGLEPDHIDVPD 956          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A0W8DU52_PHYNI (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=20 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DU52_PHYNI)

HSP 1 Score: 556 bits (1432), Expect = 1.430e-187
Identity = 265/379 (69.92%), Postives = 316/379 (83.38%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDE-QLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFGMHD++K+EV CYA SP D S+WR +I    EHF ++ +L NG+ AR IH DGI IL+NLNGYTKGARNEIFALQPAPVQ  VSY+GFCGTLGA+Y+QYM+ D TVVPPE R+++TEK + MPHSYFVNDHKQSAR VLD  + PTRA YGVPED+FV CNFNQ+YK+DP  F TWM +L+RVPN+VLWLLRFPP  E+NIR EAR RGV+D+ +L FTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MATRVA+SLL+AA   ELI ++LEEYEELAVALA+D +RL+++R RLE+ R  CPLFDTQRWV+N+E GL +A ER + GL  + I V D
Sbjct:  564 LRIGYVSSDLGNHPLAHLMQSVFGMHDKSKYEVFCYATSPDDGSIWRKQISTSVEHFVDICALSNGDAARTIHADGIHILVNLNGYTKGARNEIFALQPAPVQ--VSYMGFCGTLGADYIQYMVGDATVVPPEYRRYFTEKQINMPHSYFVNDHKQSARDVLDTDKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAANMSELITNSLEEYEELAVALASDMDRLWELRRRLEDERLHCPLFDTQRWVRNLETGLCMAWERHENGLALDHIDVPD 940          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: M4BYK0_HYAAE (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYK0_HYAAE)

HSP 1 Score: 551 bits (1419), Expect = 1.460e-185
Identity = 262/379 (69.13%), Postives = 316/379 (83.38%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDE-QLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            LR+GYVSSDLGNHPL+HLMQSVFGMHD++K+EV CYA SP D S+WR +I G  EHF ++ +L NG+ AR IH D I IL+NLNGYTKGARNEIFALQPAPVQ  VSY+GFCGTLGA+Y+QYM+ D TVVPPE R+F+TEK + MPHSYFVNDHKQSAR VLD ++ PTRA YGVPED+FV CNFNQ+YK+DP  F TWM +L+RVP++VLWLLRFPP  E+NIR EAR RG+ D+ +L FTDVA K+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MATRVA+SLL+A    ELI+++LEEYEELAVALA+D++RL+++R RLE+ R   PLFDTQRWV+N+E GL +A ER + GL P+ I V D
Sbjct:  569 LRIGYVSSDLGNHPLAHLMQSVFGMHDKSKYEVFCYATSPDDGSIWRKQIAGSVEHFVDICALSNGDAARTIHADDIHILVNLNGYTKGARNEIFALQPAPVQ--VSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSARDVLDTSKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPDSVLWLLRFPPIAEANIRAEARARGIEDQTRLVFTDVASKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAVNMSELIINSLEEYEELAVALASDADRLWRLRQRLEDERLRSPLFDTQRWVRNLELGLGMAWERHENGLLPDHIDVPD 945          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: A0A2P4Y2W6_9STRA (UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y2W6_9STRA)

HSP 1 Score: 525 bits (1353), Expect = 3.740e-184
Identity = 250/361 (69.25%), Postives = 300/361 (83.10%), Query Frame = 1
Query:   55 MQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDE-QLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            MQSVFGMHD++K+EV CYA SP D S+WR +I G  EHF ++ +L NG+ AR I+ DGI IL+NLNGYTKGARNEIFALQPAPVQ  VSY+GFCGTLGA+Y+QYM+ D TVVPPE R+F+TEK + MPHSYFVNDHKQSA+ VLD  + PTRA YGVPED+FV CNFNQ+YK+DP  F TWM +L+RVPN+VLWLLRFPP  E+NIR EAR RGV+D+ +L FTDVAPK+EH+KRGYLADLFLDTP CNAHTTGCDILW GTPM+T+   +MATRVA+SLL+AA   ELI ++LEEYEELAVALA+D +RL+++R RLE+ R  CPLFDTQRWV+N+E GL +A ER + GL P+ I V D
Sbjct:    1 MQSVFGMHDKSKYEVFCYATSPDDGSIWRKQISGSVEHFTDICALSNGDAARTIYVDGIHILVNLNGYTKGARNEIFALQPAPVQ--VSYMGFCGTLGADYIQYMVGDATVVPPEYRRFFTEKQINMPHSYFVNDHKQSAQEVLDTEKCPTRADYGVPEDKFVFCNFNQVYKIDPVTFTTWMNILKRVPNSVLWLLRFPPIAEANIRAEARARGVKDQTRLIFTDVAPKDEHLKRGYLADLFLDTPECNAHTTGCDILWGGTPMVTMPKDRMATRVASSLLRAANMSELITNSLEEYEELAVALASDMDRLWELRRRLEDERLHCPLFDTQRWVRNLETGLVMAWERHENGLAPDHIDVPD 359          
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Match: F0WMK0_9STRA (Protein O-GlcNAc transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMK0_9STRA)

HSP 1 Score: 546 bits (1406), Expect = 4.070e-184
Identity = 256/378 (67.72%), Postives = 311/378 (82.28%), Query Frame = 1
Query:    1 LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKIEGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPAPVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYFVNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWMAVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHIKRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKAAAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRWVQNMEAGLAIAHERFQAGLPPEDIQVVD 1134
            +R+GYVSSDLGNHPL+HLMQSVFGMH R+ F++ CY+ +P D S WR KI  E+EHF ++S + NGE A  I  DGI IL+NLNGYTKGARNEIFAL PAPVQ  VSY+GFCGTLGAEY+QYM+ D+ VVPPE+RQF+TEK++ MPHSYF NDHKQSAR VLD ++ P R  YGVP+ +FV CNFNQ+YK+DP  F TWM VL+RVPN++LWLLRFPP  E+NIR +AR RGV D++L FTDVA KEEH+KRG+LADLFLDTP CNAHTTGCDILW GTPM+T+A  +MATRVA+SLL+AA  DE+I ++LEEYEELAV LATD++R   I+ +LE  R SCPLFDTQRWV+N+E GL +A ER+++G PP+ I V D
Sbjct:  572 IRIGYVSSDLGNHPLAHLMQSVFGMHRRSHFDIFCYSTTPNDHSCWRKKIASEAEHFIDLSQVSNGEAAERILRDGIHILVNLNGYTKGARNEIFALGPAPVQ--VSYMGFCGTLGAEYIQYMVGDKVVVPPENRQFFTEKIISMPHSYFCNDHKQSAREVLDVSKCPKREQYGVPQGKFVFCNFNQVYKIDPDTFTTWMNVLKRVPNSILWLLRFPPVAEANIRAQARERGVPDDRLQFTDVAKKEEHLKRGHLADLFLDTPECNAHTTGCDILWGGTPMITLAKDRMATRVASSLLRAANLDEMITNSLEEYEELAVTLATDTKRWRAIKDKLERSRTSCPLFDTQRWVRNLETGLMMAWERYESGQPPDHIDVCD 947          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9468.17214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZU9_9PHAE9.990e-23184.75Protein O-GlcNAc transferase n=2 Tax=Ectocarpus Ta... [more]
K3X4T5_GLOUD1.140e-19668.52Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FGH6_PYTOL2.040e-19269.58Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7HUL3_9STRA4.880e-19170.98Protein O-GlcNAc transferase n=4 Tax=Phytophthora ... [more]
D0NXA5_PHYIT7.270e-19070.18Protein O-GlcNAc transferase n=2 Tax=Phytophthora ... [more]
A0A2D4BUC4_PYTIN1.850e-18869.58Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A0W8DU52_PHYNI1.430e-18769.92Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
M4BYK0_HYAAE1.460e-18569.13Probable UDP-N-acetylglucosamine--peptide N-acetyl... [more]
A0A2P4Y2W6_9STRA3.740e-18469.25UDP-N-acetylglucosamine-peptide N-acetylglucosamin... [more]
F0WMK0_9STRA4.070e-18467.72Protein O-GlcNAc transferase n=1 Tax=Albugo laibac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9468contigH-paniculata_contig9468:1784..8671 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score683.7
Seed ortholog evalue5.1e-194
Seed eggNOG ortholog2880.D7FX68
KEGG rclassRC00005,RC00059
KEGG koko:K09667
KEGG ReactionR09304,R09676
KEGG Pathwayko00514,ko04931,map00514,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0019538,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.protein N-acetylglucosaminyltransferase activity
EggNOG OGsCOG3914@1,KOG4626@2759
EC2.4.1.255
COG Functional cat.O
CAZyGT41
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003,ko03036
Exons10
Model size1206
Cds size1206
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9468.17214.1prot_H-paniculata_contig9468.17214.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9468 1784..8671 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931177.132617-CDS-H-paniculata_contig9468:1783..18511622931177.132617-CDS-H-paniculata_contig9468:1783..1851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 1784..1851 -
1691481625.1343935-CDS-H-paniculata_contig9468:1783..18511691481625.1343935-CDS-H-paniculata_contig9468:1783..1851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 1784..1851 -
1622931177.1466622-CDS-H-paniculata_contig9468:1907..19801622931177.1466622-CDS-H-paniculata_contig9468:1907..1980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 1908..1980 -
1691481625.1477165-CDS-H-paniculata_contig9468:1907..19801691481625.1477165-CDS-H-paniculata_contig9468:1907..1980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 1908..1980 -
1622931177.158824-CDS-H-paniculata_contig9468:2407..24821622931177.158824-CDS-H-paniculata_contig9468:2407..2482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 2408..2482 -
1691481625.1684043-CDS-H-paniculata_contig9468:2407..24821691481625.1684043-CDS-H-paniculata_contig9468:2407..2482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 2408..2482 -
1622931177.175854-CDS-H-paniculata_contig9468:3120..32771622931177.175854-CDS-H-paniculata_contig9468:3120..3277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 3121..3277 -
1691481625.1780515-CDS-H-paniculata_contig9468:3120..32771691481625.1780515-CDS-H-paniculata_contig9468:3120..3277Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 3121..3277 -
1622931177.1948009-CDS-H-paniculata_contig9468:4420..45421622931177.1948009-CDS-H-paniculata_contig9468:4420..4542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 4421..4542 -
1691481625.1865344-CDS-H-paniculata_contig9468:4420..45421691481625.1865344-CDS-H-paniculata_contig9468:4420..4542Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 4421..4542 -
1622931177.2163653-CDS-H-paniculata_contig9468:5470..57131622931177.2163653-CDS-H-paniculata_contig9468:5470..5713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 5471..5713 -
1691481625.1950333-CDS-H-paniculata_contig9468:5470..57131691481625.1950333-CDS-H-paniculata_contig9468:5470..5713Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 5471..5713 -
1622931177.2291377-CDS-H-paniculata_contig9468:6530..66831622931177.2291377-CDS-H-paniculata_contig9468:6530..6683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 6531..6683 -
1691481625.2035005-CDS-H-paniculata_contig9468:6530..66831691481625.2035005-CDS-H-paniculata_contig9468:6530..6683Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 6531..6683 -
1622931177.243311-CDS-H-paniculata_contig9468:6978..71011622931177.243311-CDS-H-paniculata_contig9468:6978..7101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 6979..7101 -
1691481625.215833-CDS-H-paniculata_contig9468:6978..71011691481625.215833-CDS-H-paniculata_contig9468:6978..7101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 6979..7101 -
1622931177.2591953-CDS-H-paniculata_contig9468:7515..76111622931177.2591953-CDS-H-paniculata_contig9468:7515..7611Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 7516..7611 -
1691481625.2244337-CDS-H-paniculata_contig9468:7515..76111691481625.2244337-CDS-H-paniculata_contig9468:7515..7611Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 7516..7611 -
1622931177.2712479-CDS-H-paniculata_contig9468:8575..86711622931177.2712479-CDS-H-paniculata_contig9468:8575..8671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 8576..8671 -
1691481625.2347324-CDS-H-paniculata_contig9468:8575..86711691481625.2347324-CDS-H-paniculata_contig9468:8575..8671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9468 8576..8671 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9468.17214.1

>prot_H-paniculata_contig9468.17214.1 ID=prot_H-paniculata_contig9468.17214.1|Name=mRNA_H-paniculata_contig9468.17214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=402bp
LRVGYVSSDLGNHPLSHLMQSVFGMHDRTKFEVKCYALSPKDSSVWRSKI
EGESEHFCEVSSLQNGEVARMIHTDGIDILINLNGYTKGARNEIFALQPA
PVQASVSYLGFCGTLGAEYMQYMIADETVVPPESRQFYTEKMMYMPHSYF
VNDHKQSARYVLDRTQLPTRAHYGVPEDRFVLCNFNQLYKMDPAIFATWM
AVLRRVPNAVLWLLRFPPAGESNIRKEARNRGVRDEQLHFTDVAPKEEHI
KRGYLADLFLDTPSCNAHTTGCDILWSGTPMLTIAGSKMATRVATSLLKA
AAADELIVHTLEEYEELAVALATDSERLFQIRSRLEEGRHSCPLFDTQRW
VQNMEAGLAIAHERFQAGLPPEDIQVVDEAGATGVASAPPAPASAGAGTT
A*
back to top

mRNA from alignment at H-paniculata_contig9468:1784..8671-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9468.17214.1 ID=mRNA_H-paniculata_contig9468.17214.1|Name=mRNA_H-paniculata_contig9468.17214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6888bp|location=Sequence derived from alignment at H-paniculata_contig9468:1784..8671- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCAGGGTTGGGTACGTGAGCAGCGACCTCGGCAACCATCCTCTGAGCCA CCTCATGCAGAGTGTCTTCGGCATGCACGATAGGACAAAATTTGAGGTGA GACCTCCAGGCCTCCGAGCCTCCGGGTCTCTTAAGAATGCAGGAGAAAAA GCATGCCCTGTTGTTCTTTGCTGGCTTCCCCGCCTTATCGGGGGGTGATG GATCGAGCGAGCGATGTATTCGGAAGGCATATCGGTTGGTACGGTTGAAA TAGGTTTCTTGAATTATGTTTCTGTCAATAGTACGGTAGGGTGGGCATAC CCGAAACGCTTTTTATCTTATTATAGCTATAGTTGAGGTGCATGACTCCT GCAAAATACATTACCCGAAACGTTTTGCATCCTATTACAGCTATAGTTCT AGGTGCAGGAATCTTGAAAAATATCCACGGACCTATGCCCGAACAGGAAG GGTAGCTCGTGAACTGAGCATGACTGCAAGTCTAGTCAGAGATCTTTTAG TGGGTGCAACCCCCACACTGCCTACTTGGTTCGGCCGACCGAACCGGGGG GGCGCCTACCCCGCAGAGGAATAAATAACCGTGTTCTGTTAAAGGAAATG TAGAAATACTTCGGTAAAATACTTGAGTATGGAAGCATCGGTAAAGGTTT TTGCCTCAGCCTTCCGGGGGTTAAAAAAAAAAAAATGAAAAATATTATTT GAATATAGAATAGGAATTGTTGCGAGGGGAAAGTCAACGGTCCTTTTTCG CTTATTTCCGCTTTTATGAATAATGCAGTATACTGGGGCCTCATGTGAGA GAATGCGTAAACGTAACTTTTGGAAATATGAGCTATTCAGCTGCATGGCT TGCGCACTTGAATTTTTTAAATAGCTGTTGAGGTCTCCTTTGATATATTG CTAAAATACTCGTTCACGTTCATGTGTACAAAATACAACCGCCTCCCCCT CCTCCCAAGTTTATTCAGTTTATGGATAATAACCAAGTTATCCAGCAGCT TAAAGATGATGAACATACGTCTGTTCCCGTCATGTGCGATGTATATCGCC CGTCACCCAGGTGAAGTGCTACGCCCTGTCTCCTAAAGACTCGAGCGTGT GGAGAAGCAAGATAGAGGGGGAGTCGGAGCACTTCTGCGAAGTGTCCAGC CTTCAGGTATTGCAGCTATCCATACTTGTAGAACGTTTGAAAATACGAAG TTAGTGATGCTTTGTGTATAGTTGACCGTATGTTGCGCCATGTAGAGAAC AGAAAAATTGAAAGCAGTCGCGTGTTCCTCTACGCACCGAGTGTACTGTG ATGGCCGCGGCAGCAGCGGGGGGATTTGTACAAAATGTTTCGTAGTTACT ACTAGAAGAGGTGTTGATCGAGGTGCTTTAGGGTATTGTGTAGTGGAACC GAATGAGAGGGCGCAAATGTTTTTTTGTTTTTTTTTGCGTTGCAAGTCGT GATTTAGAGGCATTCATTCATCCATCCAGTCATCCGTCATTGGTCAGGAT CTTTTCACTATACTTGTCTAGCCTTTTTTTTTTTTTTTCTTCGTGTTGCA TCATTTTTTGTTCGCCGCAGAATGGAGAAGTGGCGCGGATGATCCACACC GACGGCATCGACATTCTGATCAACCTCAACGGCTATACCAAGGGCGCGAG AAACGAAATATTTGCCCTTCAGCCCGCCCCTGTGCAGGCGAGTGTGGGTG CCTGACTTGAAGCACTGGTTGTTGACGTGTGTGGGTACTAATCTAGTATG TACTGAAGAAGCGTCTTGGTTTATGAAGAAGGGACATGGGTCATATTAGT GTGCAAGTCAGCAGAGTAAAAGACAGATGGAGTAAATGGTACTGTAAGTC AATGAGTGTCCGGGAGTGAGACCATATGGCGCGAATTGACCGGTATGCAC TTTGAGATCATGACCAGGTCAAGTGAAGTGGCTCGTCCCCGTCCCTGTCC GCACCCTCCTATGTGTGCCCCCACACACGCATACACAGGTGAGCTACCTG GGCTTCTGTGGCACTCTGGGGGCGGAATACATGCAGTACATGATCGCCGA CGAGACGGTAGTGCCCCCGGAGAGCCGCCAGTTCTACACGGAGAAGATGA TGTACATGCCGCACTCGTACTTCGTGAACGATCACAAACAGGTGTGGGCG TGAAGTTGGGCATAGAGTTTATTCATTCATTCTTGGCTTGGCTTGGCTTG GCTTCCCATCTCTCCCGCCTCGTTCTTAGACGGACTCGAGTGTGATTTTT TCATCGTGGGTGGGAAGTGTGTTGTCTACGTGGCTGATATGAGGGTTCAA TATCTTGGCCGGCCCGGGTTCTTGAAATGCTAGTGGGAGGAGTGATATCA AGCGGGTGCTTCTGTCTTTGCGTGTCATGACGCCAAGTGTGGAGATGATT TTTTCACCCCAGGTTTGCTCTTTTTTTTCTTTTTTTTTTACAGTTAGTGA AAAAGGAGATGAGAGACTTGCGTCACTTTTTTTAGTAAGTGAAGTCATAC TAGAATGTTTTTTGTTTGTCCTGGGTCCGTCGTACGATGGTTGGCTGCAC TCTCGCAGACGCAAAAGTCTAGATAATATACGTCGCCGCGAAGAAGCATG TTGAGAGGTACAACCGGAGGCAAAACCGATGTCCGGGAGATTTTTTTTTT TAATTCCAAGTCATGGGGTCAAGCACAAACAGTGAAAAAATGTTCCAGAC AACGATTACCACTCTGTTGCACTATTAATAGTAGTATTCAGTATAGATAA CAAAAAGTGGATATGGAAGGCACGGGTTGAAGGATTGACGTACTATCTTA CCTCACTCCAATGCGTTTTCCGCCCACCACCTCCTGGAGGTGGATGAATT GAACAGGTTACCCCAGTTTCATGTGGTGTGCACCAACCACCTCCTAACCA CCCCTTATCTCTCTTCTTCCTTTCCTTTTTCCTTTGCCAACAAATAAATC AAAAACAGTCCGCTAGGTACGTACTCGACCGTACTCAGCTCCCGACCAGG GCACACTACGGCGTTCCCGAGGACCGGTTCGTCCTGTGCAACTTCAACCA GCTGTACAAGATGGACCCCGCCATCTTCGCGACTTGGATGGCGGTCCTGC GCAGGGTGCCGAATGCGGTGCTCTGGTTACTGAGGTTTCCGCCGGCGGGA GAGTCGAATATCAGGAAAGAGGCCAGGAATCGAGGGGTCAGGGATGAGCA GGTAGGTCAAGGATACTTGACCTTTTATGAACCGGACTTCGTAACGACCA AAAGAAATTTACTAATGGTCACTCGTTGACAGTGAATACGTGGAATTCAT TCCTTTTGCCAGCCCTAGACAGACAGCTAGTTGGATGATACATCTCGGGG TCAAAAGGGATGCCTGTCTCTTTTCTTTTTTTTGCCCTTTGGGGGCTTTA TCTTGGATTTGTTGTAGAGCGAGAATGCCGTCCAAACAATTAATATGCAT TGATTCCACAGCTGATGAGGGAATTCTTCATTGGTCGTTTGGTTATATGG TCGTGTATCTATGTCTGTCTATGTGTATGCATGTGTGTGTACGTGTTTAC CACCGGTAGAAGCGACAGAGCCACAAGTACACCCGTGTAGTCCTTGATTC GTCCTCTGCCCACGGACCCGCTGCGCTCGGAGTGGCTCGCTACGCTCATT TAGCATAAACGTTTTGTGCTTCCAGGAGTTGACTCGAGTACGGACTGAAC AAACTGTTCTACAATGAGCGGTAGAGCAATGAGTACGTCGATGCAGTTAA TAATTCCTCCTCGGCCGACGGACTCGCGCTATCAGGGTGGGGGCTCTCGT GGAATAGCGAACAGCATTGCAAACGTAGTGAGCAGTTGCTCGCTACACTC GCATGAAAGTTTTCGGTTTTTTCAAGGGTTGACTTGATTGCAGACTGAAC AAACTGCTCCACAGCAACGACGGCCTTGATCATGATCACCTCAATACCTT TATACCGTGATTATTCCTTAAGGATTTCAAGTAGTAAAGCTCAAAATCTT TTGATAATTAGTCAAATATTTATACGAGGTGAGAGAGATCTGTATGGCTT TGTTCCGTGTTTTTTTTTGTTTTTTTTTGCTTTTTTAATGTGGAAACATC ACGTTTCACCCATCATTTTTTTTTGGCAGTTACACTTTACGGACGTAGCT CCCAAGGAAGAGCACATCAAGCGGGGCTACCTGGCTGATCTATTCCTCGA CACGCCTAGCTGTAACGCTCATACCACCGGCTGTGACATCCTGTGGAGCG GGTGAGCACGCGGGTATATCTGGTTTTTTTTTACAAAATGGACACGGAGA AATAACAGATGCATGGCATGGGGACAGTTGGGAGACTACTCCATTGTGTA CTCAAAATTGTGTGGAATAGGCGTTTTCGGTTAATACTGATTTATGTGTT TAGTGAACATTTTTTATTGCTCAACTGATCGTAAATCTGAGTACCCACAG GTCTTGACGGCACTGTTTTGTTTTTTTTAAAATCCAAAACTACAAGCAGC GAGAGAGTCACGCCTACGTCCGTGCAGGTCCACGTTTTGCCCGTCAACCC CACGCACAACACCCCGCTCTCGCAAGTGAGCACAAAAGTGTGTGAATTTT TTCCCACACTTCCAAAGACTAATTGGTCGGCTGAATCGACTACGACTCCT TCACTTTTATAGAATTTTTCCCCCCGAACTCTCGACCGTGTGTATCAATG AAGTGGTATTTTATAGCCGATTGATTCCTTCTCTAGCTTAATTGACTCCT GTCGGGGAATCAAGATTTTGGTATTGAGGGGTACCCCTACCTGTCGGTTT TGCCGGTTCTAACGACGAATTAATCGTTGGATTTGCGAAAGATTTCGCTG TTTGGAGTTCCGAAATAGTGTCTGCCGCGACGACCGCCACCTTTACGTAT CAATAAATGATGACTTCTTCACTCGTCTTGATGTATTCTGATGGTTATCA ATTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTACGTCCCGAATCAAGCGA GCACTTGAGTAAGTGCTTTTTTTAGCTGCTTGCGTTCTTTTCGCCTGTCT TGCTCACTTGACTTGAAGGCGAAAATATCCCCTTTTTGAATGAAAATCGT ATTGGTCCTCTCCAGTGTAACCTTTGCTTTTCCCGCTGCCATTGCATTAT TATATATAGTGTTTATTCCCTTTGCTCTAGTAATCGCTGGGGGAAATCAC CCTATGTAGAGCTCTATTTTGTATAGAGAGGCGTATTTGAGGATAAACCT TCTATTTGTTAACTCCGATTGGATATCATTCATGATCAATTCATCAGTGT ACTTTTTGCTGCTTGTATGTCCGTGTGTTCCCGTTTCACTTGTGTCGTTG TCCGTTGCTGTTTTTGTTATTTTCGTTCCTGTGCAAAAAAACAGCACTCC GATGCTGACCATTGCCGGGTCGAAGATGGCGACAAGGGTAGCCACCTCTC TCCTCAAGGCAGCCGCGGCCGACGAACTGATCGTACACACCCTCGAGGAG TACGAGGAGCTGGCTGTTGCGCTGGCGACAGACTCCGAGCGGCTGTTCCA GGTGACAAACAGAATGCATTCTCACGTGGGGGCGCGAAAGGGGTGTGGGA TAGGATGTCCGAACCTGTCTTCACGGTGATGTTTCTTTTTTTCCTGACAG AGTTTTTCATGTATTTTGAGTAGTGTGACTTGAACACGTGAGCATGACGA GAGCGGGACGGGGTGTTGAGGGAGTATTGTAGAAGCAGAAGTAACTAGAT CACCCAGCCCGACATGGTGTTTTTTTATGCTGGAACGATTTTGTTTTGGC GCATAGTTCTCTAATAGTCGGCTGCGCGAGGTGAATCCCCTAAGCTTGCA AGCGTGTCGTTGGTATTTAGCTGACGTAACGGTACGTCATCTGGGTCTGC AAGGAAAGAACAGTGCAATTGACTGCTCTCGAAACTGCCCTGTGACGGGG TGGGAACCTCGAGTATTTTGATTGTTTTGTACACAACTAGACACGTCCTG AATATCATGTCTTCGGACACTCCGGACGCTGGCAGTCATAGTTGCACGAG TGAATGGATGAACGTCCTCTTACGGCACCATCTATCCATTAAACTCACTC AGGCTCCAGCGCATGATCCTAATACCCGTACTCTACCCGCTATCGTCTGA CTTTTTTATTTTACCCGCATTTGTGTCGGTGCGCTGTAGATCCGGAGTCG TCTGGAGGAGGGGCGACACAGTTGTCCTCTGTTCGACACCCAGCGCTGGG TCCAGAATATGGAGGTGCGCGAGCATGTAGAACTCTGTCCGTGGTTTGTG TATTTTATTTCACAAACACATGTGCTTTTACTGGTTTGTTTGTTCACGGA TAATCAGTTGCTGCTGACCTAGATTTCCATACTTGTTTATCACAGCGTCC CCGCTGTCTACCCTGGGAAGAGACAAAAAAGACCCCCAACGTTGATTTTT CTTTTTTTCTCTGGACGCTCTCTCACCGTAATATTATTGGATGCATTCTA TTAGGCCCCAAGAATTAATAGAAAGCTTTCGTGCCAACTTTCATCTGTGA TTCTGTTTTGGTAACCTTGAGGAATGGTGACTTGCACATGTCGAGCTGTC ACGCAAACACCAATGCCTCTTGCTTCGACACCCCCAGGCAACCCCTAATT TCCAACCCTTAACCACCCAAACACACGTCGCACGAACGTAGGCTGGCCTA GCCATAGCCCACGAGCGGTTTCAGGCCGGACTCCCACCCGAAGACATCCA AGTTGTGGACGAGGGTACCCACACCAGTACCCAACAAATCCATCAAACCC AGCAGCACCAGCAGCACCAGCAGGAGCAACCGGCGTCGCCTCCGCCCCCC CCGCCCCCGCCTCTGCAGGAGCAGGCACCACAGCATGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9468:1784..8671-

>mRNA_H-paniculata_contig9468.17214.1 ID=mRNA_H-paniculata_contig9468.17214.1|Name=mRNA_H-paniculata_contig9468.17214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2412bp|location=Sequence derived from alignment at H-paniculata_contig9468:1784..8671- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCAGGGTTGGGTACGTGAGCAGCGACCTCGGCAACCATCCTCTGAGCCA
CCTCATGCAGAGTGTCTTCGGCATGCACGATAGGACAAAATTTGAGCTCA
GGGTTGGGTACGTGAGCAGCGACCTCGGCAACCATCCTCTGAGCCACCTC
ATGCAGAGTGTCTTCGGCATGCACGATAGGACAAAATTTGAGGTGAAGTG
CTACGCCCTGTCTCCTAAAGACTCGAGCGTGTGGAGAAGCAAGATAGAGG
GGGAGTCGGAGCACTTCTGCGAAGTGTCCAGCCTTCAGGTGAAGTGCTAC
GCCCTGTCTCCTAAAGACTCGAGCGTGTGGAGAAGCAAGATAGAGGGGGA
GTCGGAGCACTTCTGCGAAGTGTCCAGCCTTCAGAATGGAGAAGTGGCGC
GGATGATCCACACCGACGGCATCGACATTCTGATCAACCTCAACGGCTAT
ACCAAGGGCGCGAGAAACGAAATATTTGCCCTTCAGCCCGCCCCTGTGCA
GGCGAGTAATGGAGAAGTGGCGCGGATGATCCACACCGACGGCATCGACA
TTCTGATCAACCTCAACGGCTATACCAAGGGCGCGAGAAACGAAATATTT
GCCCTTCAGCCCGCCCCTGTGCAGGCGAGTGTGAGCTACCTGGGCTTCTG
TGGCACTCTGGGGGCGGAATACATGCAGTACATGATCGCCGACGAGACGG
TAGTGCCCCCGGAGAGCCGCCAGTTCTACACGGAGAAGATGATGTACATG
CCGCACTCGTACTTCGTGAACGATCACAAACAGGTGAGCTACCTGGGCTT
CTGTGGCACTCTGGGGGCGGAATACATGCAGTACATGATCGCCGACGAGA
CGGTAGTGCCCCCGGAGAGCCGCCAGTTCTACACGGAGAAGATGATGTAC
ATGCCGCACTCGTACTTCGTGAACGATCACAAACAGTCCGCTAGGTACGT
ACTCGACCGTACTCAGCTCCCGACCAGGGCACACTACGGCGTTCCCGAGG
ACCGGTTCGTCCTGTGCAACTTCAACCAGCTGTACAAGATGGACCCCGCC
ATCTTCGCGACTTGGATGGCGGTCCTGCGCAGGGTGCCGAATGCGGTGCT
CTGGTTACTGAGGTTTCCGCCGGCGGGAGAGTCGAATATCAGGAAAGAGG
CCAGGAATCGAGGGGTCAGGGATGAGCAGTCCGCTAGGTACGTACTCGAC
CGTACTCAGCTCCCGACCAGGGCACACTACGGCGTTCCCGAGGACCGGTT
CGTCCTGTGCAACTTCAACCAGCTGTACAAGATGGACCCCGCCATCTTCG
CGACTTGGATGGCGGTCCTGCGCAGGGTGCCGAATGCGGTGCTCTGGTTA
CTGAGGTTTCCGCCGGCGGGAGAGTCGAATATCAGGAAAGAGGCCAGGAA
TCGAGGGGTCAGGGATGAGCAGTTACACTTTACGGACGTAGCTCCCAAGG
AAGAGCACATCAAGCGGGGCTACCTGGCTGATCTATTCCTCGACACGCCT
AGCTGTAACGCTCATACCACCGGCTGTGACATCCTGTGGAGCGGTTACAC
TTTACGGACGTAGCTCCCAAGGAAGAGCACATCAAGCGGGGCTACCTGGC
TGATCTATTCCTCGACACGCCTAGCTGTAACGCTCATACCACCGGCTGTG
ACATCCTGTGGAGCGGCACTCCGATGCTGACCATTGCCGGGTCGAAGATG
GCGACAAGGGTAGCCACCTCTCTCCTCAAGGCAGCCGCGGCCGACGAACT
GATCGTACACACCCTCGAGGAGTACGAGGAGCTGGCTGTTGCGCTGGCGA
CAGACTCCGAGCGGCTGTTCCAGCACTCCGATGCTGACCATTGCCGGGTC
GAAGATGGCGACAAGGGTAGCCACCTCTCTCCTCAAGGCAGCCGCGGCCG
ACGAACTGATCGTACACACCCTCGAGGAGTACGAGGAGCTGGCTGTTGCG
CTGGCGACAGACTCCGAGCGGCTGTTCCAGATCCGGAGTCGTCTGGAGGA
GGGGCGACACAGTTGTCCTCTGTTCGACACCCAGCGCTGGGTCCAGAATA
TGGAGATCCGGAGTCGTCTGGAGGAGGGGCGACACAGTTGTCCTCTGTTC
GACACCCAGCGCTGGGTCCAGAATATGGAGGCTGGCCTAGCCATAGCCCA
CGAGCGGTTTCAGGCCGGACTCCCACCCGAAGACATCCAAGTTGTGGACG
AGGGCTGGCCTAGCCATAGCCCACGAGCGGTTTCAGGCCGGACTCCCACC
CGAAGACATCCAAGTTGTGGACGAGGCAGGAGCAACCGGCGTCGCCTCCG
CCCCCCCCGCCCCCGCCTCTGCAGGAGCAGGCACCACAGCATGACAGGAG
CAACCGGCGTCGCCTCCGCCCCCCCCGCCCCCGCCTCTGCAGGAGCAGGC
ACCACAGCATGA
back to top