prot_H-paniculata_contig9458.17205.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9458.17205.1
Unique Nameprot_H-paniculata_contig9458.17205.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
BLAST of mRNA_H-paniculata_contig9458.17205.1 vs. uniprot
Match: D7FIP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP3_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.220e-65
Identity = 148/304 (48.68%), Postives = 181/304 (59.54%), Query Frame = 0
Query:    1 MAGQWKDAHSLPRVWKALVIAGLLGCEKSTGFIPATHRL----AACRP----ITYP---SPSTCCMVSKEMSRDDGLNSRTTHSRPASRRNNSLRDAAAACLATATILSSCMPPDATALGFSSTAG-----DGGSGSIQKRHGAPITLVLSEEESATIAPGAISSGEPTDVPSLLSELKGGRDAKATLGTMIKINDIVDADEDAVLEDSVAKQNLVKGLIDKRRARGQAWDDDTEVAFGILKRKLDPFNVVLLRPYLQIAPFLGGTYYLAIFFVQQKFRGFFPFAYFAAVAVFVAPAAILVLNN 288
            M G      SL R+    ++ G L C   T F+PA H L    +A R     +T+P   SP         +  DD    + T     S  + + R AAA CLATA ILSS +P  A     S + G     DGG GS      A + +VL++E   + A G        DV  L+ ELK        L +M+KIND+VD DED VLE+  A +++VKGLIDKRRA G+AWD +TE AFGILKRKLDPFNVVLLRPYL+IAPFLGG YYLA+FFVQQKFRGFFP+AYF AVAVFVAPA I++L N
Sbjct:    1 MDGFHSQKKSLRRLTMHTLV-GFLSCHDGTAFVPAAHMLGGGMSAIRSTTSRLTFPAHRSPPGMTTSDGGLHHDD----KQTGEAKTSAWSGACRTAAA-CLATAAILSSSLPAGAA----SGSRGVRHHLDGGRGSSP----ANVLMVLADEGDFSSADGR------ADVSQLVLELKKADRPDTLLNSMVKINDVVDWDEDGVLENPFAAESIVKGLIDKRRAGGEAWDSNTETAFGILKRKLDPFNVVLLRPYLKIAPFLGGAYYLAVFFVQQKFRGFFPYAYFGAVAVFVAPALIVILAN 284          
BLAST of mRNA_H-paniculata_contig9458.17205.1 vs. uniprot
Match: A0A836CGK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGK9_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.210e-35
Identity = 70/137 (51.09%), Postives = 97/137 (70.80%), Query Frame = 0
Query:  154 DVPSLLSELKGGRDAKATLGTMIKINDIVDADEDAVLEDSVAKQNLVKGLIDKRR-ARGQA-WDDDTEVAFGILKRKLDPFNVVLLRPYLQIAPFLGGTYYLAIFFVQQKFRGFFPFAYFAAVAVFVAPAAILVLNN 288
            D+   L+EL   +DA  TL  M+K+N+I+D+D D  +E+ +A++ +V+GL  K+R AR    W DD + A+G+L+R+LDP+N   LRPYL +APFLGG YYLA FFVQQKF   FP AYF+ V VFVAP   L++N+
Sbjct:   10 DMDGALAELSRAKDADQTLTAMVKVNEILDSD-DGTMENPLAREIVVRGLSAKKREARTTGEWRDDIDFAYGVLRRRLDPYNTFALRPYLGVAPFLGGLYYLAAFFVQQKFPEAFPLAYFSLVGVFVAPILFLLVNS 145          
BLAST of mRNA_H-paniculata_contig9458.17205.1 vs. uniprot
Match: A0A7S2XUD1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUD1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 3.420e-17
Identity = 41/104 (39.42%), Postives = 63/104 (60.58%), Query Frame = 0
Query:  185 DEDAVLEDSVAKQNLVKGLIDKRRARGQAWDDDTEVAFGILKRKLDPFNVVLLRPYLQIAPFLGGTYYLAIFFVQQKFRGFFPFAYFAAVAVFVAPAAILVLNN 288
            DED  L ++  K+ +V+ + +K+ +    W  + E+ F ++KRKLDP+N V+L PYL++APF+GG  YLA+ +VQQ     F +AY      F AP  I+ L  
Sbjct:  152 DEDGPLVETADKKLVVQKVREKKASSQAVWTAENEIEFSVIKRKLDPYNTVVLGPYLKVAPFVGGAIYLALIWVQQSLPRVFDYAYIVGALAFAAPIFIIALKG 255          
BLAST of mRNA_H-paniculata_contig9458.17205.1 vs. uniprot
Match: A0A6T5PVA6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5PVA6_HETAK)

HSP 1 Score: 85.9 bits (211), Expect = 2.880e-16
Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 0
Query:  166 RDAKATLGTMIKINDIVDADEDAVLEDSVAKQNLVKGLIDKRRARG-QAWDDDTEVAFGILKRKLDPFNVVLLRPYLQIAPFLGGTYYLAIFFVQQKFRG-FFPFAYFAAVAVFVAPAAILVLNN 288
            +D  + +G   ++N +  AD+D VL D   ++ +V+ LI+K+  +  + WD+     +GILKRKLDP+N V L  YL +AP+LGG  YLA+  VQ+   G  F  AY      F APA +L L +
Sbjct:  107 KDTDSIIGLFAEVNRM--ADDDEVLIDPKDRKEVVRALIEKKANQADEKWDEQVYNGYGILKRKLDPYNTVALGGYLSVAPYLGGLLYLALVAVQRALPGRAFDVAYVVGALAFFAPAVLLALAS 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9458.17205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIP3_ECTSI1.220e-6548.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGK9_9STRA1.210e-3551.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XUD1_9STRA3.420e-1739.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6T5PVA6_HETAK2.880e-1639.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..258
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..286
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 259..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 287..288
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9458contigH-paniculata_contig9458:5520..8787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9458.17205.1mRNA_H-paniculata_contig9458.17205.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9458 5508..9416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9458.17205.1 ID=prot_H-paniculata_contig9458.17205.1|Name=mRNA_H-paniculata_contig9458.17205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
MAGQWKDAHSLPRVWKALVIAGLLGCEKSTGFIPATHRLAACRPITYPSP
STCCMVSKEMSRDDGLNSRTTHSRPASRRNNSLRDAAAACLATATILSSC
MPPDATALGFSSTAGDGGSGSIQKRHGAPITLVLSEEESATIAPGAISSG
EPTDVPSLLSELKGGRDAKATLGTMIKINDIVDADEDAVLEDSVAKQNLV
KGLIDKRRARGQAWDDDTEVAFGILKRKLDPFNVVLLRPYLQIAPFLGGT
YYLAIFFVQQKFRGFFPFAYFAAVAVFVAPAAILVLNN*
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