prot_H-paniculata_contig9433.17188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig9433.17188.1
Unique Name	prot_H-paniculata_contig9433.17188.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	164

Homology

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: D8LIE6_ECTSI (Conserved protein of fucose operon n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIE6_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.460e-70
Identity = 113/164 (68.90%), Postives = 130/164 (79.27%), Query Frame = 0

Query:    1 MGLSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVLGVGLDDAG 164
            MGL GISP+ISP+LLV LARMGHGD ICFADA+FPSE++               P+ VRADGHE+ PLL+AV+KL PLDTYTEFPVQMMAAV GDELD +IE RF+ AVE+ QP MF+VERVERF FYERARS + VV+TGETAKYGN+IL KGVLGV  + AG
Sbjct:    1 MGLIGISPLISPDLLVTLARMGHGDSICFADANFPSENL--------TSPGKPGPITVRADGHEVAPLLRAVSKLFPLDTYTEFPVQMMAAVPGDELDASIEERFSTAVEAEQPGMFKVERVERFAFYERARSCYAVVSTGETAKYGNIILVKGVLGVSDESAG 156

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: UPI001B8F97EE (L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001B8F97EE)

HSP 1 Score: 161 bits (408), Expect = 4.090e-48
Identity = 83/153 (54.25%), Postives = 101/153 (66.01%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISP+ISPELL  LARMGHGD+I FADAHFP ES+                 ++RADG  I  LL A+  L  LD Y   P+ MMA V GD+LDP++E  + EA+    P    +ER+ERF+FYERAR+AF VV TGETAKYGN++L KGV
Sbjct:    2 LKGISPLISPELLAVLARMGHGDEIVFADAHFPGESLNAN--------------VIRADGLHIADLLAAILPLFELDAYVSAPIVMMAPVEGDDLDPSVETAYLEAIHQTNPHAPAIERIERFDFYERARNAFAVVMTGETAKYGNILLKKGV 140

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: UPI0004789706 (L-fucose mutarotase n=1 Tax=Alkaliflexus imshenetskii TaxID=286730 RepID=UPI0004789706)

HSP 1 Score: 159 bits (402), Expect = 3.440e-47
Identity = 88/157 (56.05%), Postives = 106/157 (67.52%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVLGVG 159
            L GISPIISP+LL  LARMGHGD+I FADAHFP ES                  ++RADG  I  LL+AV  L  LD+Y   P+ MMAAV GD LDPA+E ++ +AV+ + P++  V+R+ERF FYER RSAF VV TGETAKYGN+IL KGV   G
Sbjct:    2 LKGISPIISPDLLQILARMGHGDEIVFADAHFPGESFNS--------------RILRADGIRIPDLLEAVLPLFELDSYVPNPLIMMAAVEGDVLDPAVEQQYLKAVQISNPNISSVKRIERFAFYERTRSAFAVVMTGETAKYGNIILKKGVTPTG 144

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A4U2LAJ6_9BACT (D-ribose pyranase n=1 Tax=Puteibacter caeruleilacunae TaxID=2528631 RepID=A0A4U2LAJ6_9BACT)

HSP 1 Score: 158 bits (399), Expect = 9.810e-47
Identity = 84/153 (54.90%), Postives = 104/153 (67.97%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISP+ISP+LL  LARMGHGD+I  ADAHFP+ES                  ++RADG +I  LL+A+  L  LD+Y E P+ MM AV GDELDP +E ++ +AVE   P +  VER+ERF FY+RA+SAF VV TGET KYGN+IL KGV
Sbjct:    2 LKGISPLISPKLLETLARMGHGDEIILADAHFPAESFNDN--------------VLRADGIKIPDLLQAILPLFELDSYVENPLIMMQAVEGDELDPEVEKQYMKAVEQTNPQLTTVERIERFSFYDRAKSAFAVVMTGETVKYGNIILKKGV 140

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A0K8R165_9BACT (D-ribose pyranase n=1 Tax=Bacteroidales bacterium 6E TaxID=1688776 RepID=A0A0K8R165_9BACT)

HSP 1 Score: 157 bits (398), Expect = 1.310e-46
Identity = 85/154 (55.19%), Postives = 103/154 (66.88%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVL 156
            L GISPIISP LL  LARMGHGD+I  ADAHFP E+                  ++RADG +I  LL+A+ +L  LD+Y   PV MM AV GD+LDP +E  + ++++   P +  VERVERFEFYER RSAF VV TGETAKYGNVIL KGV+
Sbjct:    2 LKGISPIISPALLEILARMGHGDEIVLADAHFPGETFN--------------TRVIRADGLKIPALLEAILQLFELDSYVPHPVAMMDAVPGDQLDPTVEQSYLKSIQLTHPKIQSVERVERFEFYERTRSAFAVVMTGETAKYGNVILKKGVI 141

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A7K3XDQ0_9BACT (D-ribose pyranase n=1 Tax=Mariniphaga sp. TaxID=1954475 RepID=A0A7K3XDQ0_9BACT)

HSP 1 Score: 157 bits (397), Expect = 1.910e-46
Identity = 83/153 (54.25%), Postives = 101/153 (66.01%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISP+ISPELL  LARMGHGD+I  ADAHFP E+                P ++RADG +I  LL A+  L  LD Y   P+ MMAAV GD LDP +E  + +++    PS+  +E+VERF FYERA+SAF VV TGETAKYGN+IL KGV
Sbjct:    2 LKGISPLISPELLSVLARMGHGDEIVLADAHFPGETFN--------------PRVLRADGLKIADLLSAILPLFELDAYAAHPIAMMAAVPGDALDPLVEASYLKSILETNPSVAPIEQVERFAFYERAKSAFAVVMTGETAKYGNIILKKGV 140

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A350YV71_9BACT (D-ribose pyranase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A350YV71_9BACT)

HSP 1 Score: 156 bits (395), Expect = 3.730e-46
Identity = 83/154 (53.90%), Postives = 103/154 (66.88%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGVL 156
            L GISPIISP LL  LARMGHGD+I  ADAHFP E+                  ++RADG +I+ LL+A+  L  LD+Y   PV MM AV GD+LDPA+E  + ++++   PS+  VERVERF FY+R RSAF VV TGET KYGN+IL KGV+
Sbjct:    2 LKGISPIISPALLEVLARMGHGDEIVLADAHFPGETFNS--------------RVIRADGLKISSLLEAILPLFELDSYVPHPVAMMDAVPGDQLDPAVEETYLKSIQITHPSIHSVERVERFAFYDRTRSAFAVVMTGETTKYGNIILKKGVI 141

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A432IQD0_9BACT (D-ribose pyranase n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A432IQD0_9BACT)

HSP 1 Score: 156 bits (394), Expect = 5.290e-46
Identity = 80/153 (52.29%), Postives = 104/153 (67.97%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISP+ISP+LL  LARMGHGD+I  ADAHFP E+                  ++RADG +I  LL+A+  L  LD+YT+ P+ MMAAV GD+LDPA+E  + E +    P +  ++R++RFEFY+RA+ AF VV TGETAKYGN+IL KGV
Sbjct:    2 LKGISPVISPDLLSTLARMGHGDEIILADAHFPGETFNAN--------------VLRADGIKIPQLLEAILPLFELDSYTDSPLIMMAAVTGDQLDPAVEASYMEKIHLTNPEVPAIKRIDRFEFYKRAKDAFAVVMTGETAKYGNIILKKGV 140

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: A0A6C1RYY7_9BACT (D-ribose pyranase n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A6C1RYY7_9BACT)

HSP 1 Score: 155 bits (393), Expect = 7.510e-46
Identity = 83/153 (54.25%), Postives = 100/153 (65.36%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISPIISP+LL  LARMGHGD+I  ADAHFP ES+                L+VRADG  I  L++A+  L  LD Y + P+ MM AV GD LDP +E  + + V    P +   ER++RF FYERA+SAF VV TGETAKYGN+ILTKGV
Sbjct:    2 LKGISPIISPQLLEVLARMGHGDEIVLADAHFPGESLNS--------------LVVRADGLRIADLIEAILPLFELDAYVDTPLVMMDAVEGDHLDPGVEASYMDRVRLTNPGVSPPERIDRFAFYERAKSAFAVVMTGETAKYGNIILTKGV 140

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BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Match: W7Y912_9BACT (D-ribose pyranase n=5 Tax=Marinilabiliaceae TaxID=558415 RepID=W7Y912_9BACT)

HSP 1 Score: 155 bits (392), Expect = 1.100e-45
Identity = 81/153 (52.94%), Postives = 103/153 (67.32%), Query Frame = 0

Query:    3 LSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGXXXXXXXXXSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPAIEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVILTKGV 155
            L GISP+ISPELL  LARMGHGD+I  ADAHFP ES  G               ++RADG  I  LL+A+  L  LD+Y   P+ MMAAV GDELDP +E  + +A+  + P++  +ER+ RFEFY++AR AF V+ TGETAKYGN++L KGV
Sbjct:    2 LKGISPLISPELLEVLARMGHGDEIILADAHFPGESFNG--------------RVLRADGLRIPDLLEAILPLFELDSYVPAPLTMMAAVEGDELDPTVEEAYLKAIHKSNPNVPPIERIGRFEFYDKARGAFAVLMTGETAKYGNILLKKGV 140

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig9433.17188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIE6_ECTSI	3.460e-70	68.90	Conserved protein of fucose operon n=2 Tax=Ectocar...	[more]
UPI001B8F97EE	4.090e-48	54.25	L-fucose mutarotase n=2 Tax=Carboxylicivirga TaxID...	[more]
UPI0004789706	3.440e-47	56.05	L-fucose mutarotase n=1 Tax=Alkaliflexus imshenets...	[more]
A0A4U2LAJ6_9BACT	9.810e-47	54.90	D-ribose pyranase n=1 Tax=Puteibacter caeruleilacu...	[more]
A0A0K8R165_9BACT	1.310e-46	55.19	D-ribose pyranase n=1 Tax=Bacteroidales bacterium ...	[more]
A0A7K3XDQ0_9BACT	1.910e-46	54.25	D-ribose pyranase n=1 Tax=Mariniphaga sp. TaxID=19...	[more]
A0A350YV71_9BACT	3.730e-46	53.90	D-ribose pyranase n=1 Tax=Prolixibacteraceae bacte...	[more]
A0A432IQD0_9BACT	5.290e-46	52.29	D-ribose pyranase n=1 Tax=Flavobacteriia bacterium...	[more]
A0A6C1RYY7_9BACT	7.510e-46	54.25	D-ribose pyranase n=1 Tax=Marinilabiliales bacteri...	[more]
W7Y912_9BACT	1.100e-45	52.94	D-ribose pyranase n=5 Tax=Marinilabiliaceae TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007721	D-ribose pyranase RbsD/L-fucose mutarotase FucU	PFAM	PF05025	RbsD_FucU	coord: 5..155 e-value: 8.9E-35 score: 120.0
IPR023750	RbsD-like superfamily	GENE3D	3.40.1650.10		coord: 1..157 e-value: 1.9E-45 score: 156.7
IPR023750	RbsD-like superfamily	SUPERFAMILY	102546	RbsD-like	coord: 3..156
None	No IPR available	PANTHER	PTHR31690	FAMILY NOT NAMED	coord: 3..157

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig9433	contig	H-paniculata_contig9433:4981..5472 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig9433.17188.1	mRNA_H-paniculata_contig9433.17188.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig9433 4981..5472 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig9433.17188.1 ID=prot_H-paniculata_contig9433.17188.1|Name=mRNA_H-paniculata_contig9433.17188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MGLSGISPIISPELLVALARMGHGDKICFADAHFPSESIGGGGSSNKNNS
NSNLPLLVRADGHEITPLLKAVAKLIPLDTYTEFPVQMMAAVVGDELDPA
IEVRFAEAVESAQPSMFRVERVERFEFYERARSAFVVVATGETAKYGNVI
LTKGVLGVGLDDAG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007721	RbsD_FucU
IPR023750	RbsD-like_sf