mRNA_H-paniculata_contig9429.17183.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9429.17183.1
Unique NamemRNA_H-paniculata_contig9429.17183.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: D7FHI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHI5_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.570e-33
Identity = 67/108 (62.04%), Postives = 80/108 (74.07%), Query Frame = 3 
Query:   69 LRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH-----DFCQV 377
            +++S  AT QW+LEG   YG++GF  A  SFSP  L V+MR KV CVTGANSGIGY  AKSLA RN  VHM+CRN+ARGEEAR+R+  ETGNE+V+LH     DF QV
Sbjct:    1 MKYSVAATAQWFLEGSRKYGAKGFANACASFSPGDLDVNMRSKVACVTGANSGIGYCAAKSLAERNCTVHMLCRNKARGEEARARLSAETGNEDVYLHVVDVSDFQQV 108
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A812ZE25_9DINO (DHRS12 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZE25_9DINO)

HSP 1 Score: 96.7 bits (239), Expect = 5.300e-20
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 3 
Query:   63 MVLRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDAL-AVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            M L++S ++T  WYL+GV  YG  GF +A+  + P  L  VDM GK   +TGANSGIG + A   A  NA VH++CR++ RG +AR  +   +GN NVHLH
Sbjct:    1 MGLKYSLLSTPAWYLDGVRRYGHAGFTEAAKHWDPAHLQGVDMSGKHVLITGANSGIGLAAASKFAEMNATVHLLCRSETRGADARDSIKAASGNPNVHLH 101
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: K7F715_PELSI (Uncharacterized protein n=2 Tax=Cryptodira TaxID=8464 RepID=K7F715_PELSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.510e-18
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            W+L+G+  Y   G++ AS  F P  L V++ G+   +TGANSGIG + A  +A R   +H+ICRN+ R EEA+S ++TETGN+NV LH
Sbjct:    9 WFLKGLREYTRSGYESASKHFVPADLEVNVTGRSFMITGANSGIGKAAATEIAKRGGTLHLICRNKERAEEAKSEIITETGNQNVFLH 96
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A8B8EAT8_CRAVI (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EAT8_CRAVI)

HSP 1 Score: 91.3 bits (225), Expect = 3.520e-18
Identity = 43/101 (42.57%), Postives = 64/101 (63.37%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLHDFCQVLYRRLANF 401
            W+++G+  Y   GFQ AS +F+   L V+  G+   +TGANSGIG   A ++A +   VHM+CR+  RGEEAR  ++++TGN++VHLH       R + NF
Sbjct:    9 WFVKGLREYTKSGFQSASKNFNNADLEVNASGRAFMITGANSGIGKCAAIAIAQKGGTVHMVCRDLTRGEEARQEIISQTGNQDVHLHQLDMSRPRDIFNF 109
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A2V3J6W6_9FLOR (Dehydrogenase/reductase SDR family member 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6W6_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 3.980e-18
Identity = 42/91 (46.15%), Postives = 62/91 (68.13%), Query Frame = 3 
Query:   90 TTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            T Q+   G L++GSRGF+    SF+P AL +D+ GK   VTG  SG+G+  A+ +A R   VH++CRN A+GE ARS++V ++GN+ V +H
Sbjct:    6 TVQFVALGCLTFGSRGFRARKKSFNPTALDIDLTGKHYIVTGGTSGLGFVTAQQIAERGGTVHIVCRNGAKGETARSQIVAQSGNDRVQIH 96
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: K1R3A5_CRAGI (Dehydrogenase/reductase SDR family member 12 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R3A5_CRAGI)

HSP 1 Score: 90.9 bits (224), Expect = 4.870e-18
Identity = 41/88 (46.59%), Postives = 61/88 (69.32%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            W+++G+  Y   GFQ AS +F+   L V++ G+   +TGANSGIG   A ++A +   VHM+CR+  RGEEAR  ++T+TGN++VHLH
Sbjct:    9 WFVKGLREYTKSGFQSASKNFNNADLEVNVNGRAFMITGANSGIGKCAAIAIAQKGGIVHMVCRDVTRGEEARQEIITQTGNQDVHLH 96
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: UPI0003318DB4 (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI0003318DB4)

HSP 1 Score: 89.0 bits (219), Expect = 9.290e-18
Identity = 42/95 (44.21%), Postives = 63/95 (66.32%), Query Frame = 3 
Query:   78 SPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            S    T W+L+G+  Y S G+ +AS  F  D L V + G+   VTG+NSGIG ++A +LA R   VHM+CR+QA+ E+ R+++VT+T N+ V +H
Sbjct:    2 SAYRNTIWFLKGLREYTSGGYDRASRHFVNDDLDVQLNGRSFLVTGSNSGIGEAIAMALAQRGGRVHMVCRDQAKAEQVRNKIVTKTRNQEVFIH 96
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A6J1SUB1_FRAOC (dehydrogenase/reductase SDR family member 12-like n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1SUB1_FRAOC)

HSP 1 Score: 89.0 bits (219), Expect = 2.530e-17
Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            W+++G+  Y   G+Q AS +F+   L VD  GKV  +TGANSGIG SVA+ +A     VHM+CRN    EEA++R++ +T N+N++LH
Sbjct:    9 WFMKGLREYTKSGYQSASKNFNDGDLDVDCSGKVYMITGANSGIGESVAQHVAKCGGTVHMVCRNAQTAEEAKARMIEKTNNQNIYLH 96
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BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: UPI0014868F40 (dehydrogenase/reductase SDR family member 12-like isoform X1 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI0014868F40)

HSP 1 Score: 88.6 bits (218), Expect = 3.500e-17
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            W+L G+  Y  RG++ A  +F P  L V + G+   +TGANSGIG + A ++A +   VHM+CRN+ + EEARS +V+E+GN  VH+H
Sbjct:    9 WFLNGLHQYTRRGYEAAVKNFEPQDLEVSVVGRSFMITGANSGIGRATAMAIAKKGGTVHMVCRNKGKAEEARSDIVSESGNTEVHVH 96
[Close]
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Match: A0A6G0IHR4_LARCR (Dehydrogenase/reductase SDR family member 12 n=2 Tax=Eupercaria TaxID=1489922 RepID=A0A6G0IHR4_LARCR)

HSP 1 Score: 87.4 bits (215), Expect = 3.860e-17
Identity = 39/88 (44.32%), Postives = 58/88 (65.91%), Query Frame = 3 
Query:   99 WYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVTGANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH 362
            W+L G+  Y  +G++ AS  F P  L V + G+   +TGANSGIG + A ++A +   VHM+CRN+ + EEAR+ +V E+GN  VH+H
Sbjct:    9 WFLNGIHQYTRKGYEAASKDFEPQDLNVSVVGRSFMITGANSGIGRATAMAIAKKGGTVHMVCRNKDKAEEARTDIVNESGNTEVHVH 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9429.17183.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHI5_ECTSI1.570e-3362.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812ZE25_9DINO5.300e-2047.52DHRS12 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
K7F715_PELSI2.510e-1847.73Uncharacterized protein n=2 Tax=Cryptodira TaxID=8... [more]
A0A8B8EAT8_CRAVI3.520e-1842.57dehydrogenase/reductase SDR family member 12-like ... [more]
A0A2V3J6W6_9FLOR3.980e-1846.15Dehydrogenase/reductase SDR family member 12 n=1 T... [more]
K1R3A5_CRAGI4.870e-1846.59Dehydrogenase/reductase SDR family member 12 n=2 T... [more]
UPI0003318DB49.290e-1844.21dehydrogenase/reductase SDR family member 12-like ... [more]
A0A6J1SUB1_FRAOC2.530e-1746.59dehydrogenase/reductase SDR family member 12-like ... [more]
UPI0014868F403.500e-1745.45dehydrogenase/reductase SDR family member 12-like ... [more]
A0A6G0IHR4_LARCR3.860e-1744.32Dehydrogenase/reductase SDR family member 12 n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9429contigH-paniculata_contig9429:1887..4641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score133.7
Seed ortholog evalue6.8e-29
Seed eggNOG ortholog2880.D7FHI5
Preferred nameDHRS12
KEGG koko:K11168
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidation-reduction process
EggNOG OGsCOG1028@1,KOG1208@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons4
Model size687
Cds size414
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9429.17183.1prot_H-paniculata_contig9429.17183.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9429 1949..4430 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931172.8530197-UTR-H-paniculata_contig9429:1886..19481622931172.8530197-UTR-H-paniculata_contig9429:1886..1948Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9429 1887..1948 +
1691481623.2320163-UTR-H-paniculata_contig9429:1886..19481691481623.2320163-UTR-H-paniculata_contig9429:1886..1948Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9429 1887..1948 +
1622931172.9381924-UTR-H-paniculata_contig9429:4430..46411622931172.9381924-UTR-H-paniculata_contig9429:4430..4641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9429 4431..4641 +
1691481623.2920985-UTR-H-paniculata_contig9429:4430..46411691481623.2920985-UTR-H-paniculata_contig9429:4430..4641Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9429 4431..4641 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931172.8737068-CDS-H-paniculata_contig9429:1948..19571622931172.8737068-CDS-H-paniculata_contig9429:1948..1957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 1949..1957 +
1691481623.2457838-CDS-H-paniculata_contig9429:1948..19571691481623.2457838-CDS-H-paniculata_contig9429:1948..1957Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 1949..1957 +
1622931172.8887198-CDS-H-paniculata_contig9429:3713..38241622931172.8887198-CDS-H-paniculata_contig9429:3713..3824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 3714..3824 +
1691481623.2638373-CDS-H-paniculata_contig9429:3713..38241691481623.2638373-CDS-H-paniculata_contig9429:3713..3824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 3714..3824 +
1622931172.9019227-CDS-H-paniculata_contig9429:4121..43011622931172.9019227-CDS-H-paniculata_contig9429:4121..4301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 4122..4301 +
1691481623.2737932-CDS-H-paniculata_contig9429:4121..43011691481623.2737932-CDS-H-paniculata_contig9429:4121..4301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 4122..4301 +
1622931172.9170191-CDS-H-paniculata_contig9429:4316..44301622931172.9170191-CDS-H-paniculata_contig9429:4316..4430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 4317..4430 +
1691481623.282494-CDS-H-paniculata_contig9429:4316..44301691481623.282494-CDS-H-paniculata_contig9429:4316..4430Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9429 4317..4430 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9429.17183.1

>prot_H-paniculata_contig9429.17183.1 ID=prot_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MVLRFSPVATTQWYLEGVLSYGSRGFQKASTSFSPDALAVDMRGKVTCVT
GANSGIGYSVAKSLAARNANVHMICRNQARGEEARSRVVTETGNENVHLH
DFCQVLYRRLANFTVGDGVVSWDIFMSRTIDSARPNF*
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mRNA from alignment at H-paniculata_contig9429:1887..4641+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9429.17183.1 ID=mRNA_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2755bp|location=Sequence derived from alignment at H-paniculata_contig9429:1887..4641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGTACAGACAGCAGACCGGGAGACCGTAAAGAGGCAGGTGGCGAGGC
TACTTCCTGATCATGGTGCTGGTGAGCCACACCTGCTGGGTTATGTCTGT
TCTTCGTGTCGAACGCCTTGTTTTTCAGCAGTAAAAAAACAGACTTCTTC
CTGTTTTGATCATCTAAATCTAGTTCTCTGTACTGACGGTACTGACCGAT
TGATTGTGGTGTACTGTCTACTGTTCCTGCTACAGGAGTTAGCAACGGCT
GCGACTTCACCTGATCGGTGTACTTTGCAGTAACACCTAGATTTCCCCAG
AGAAGTTTTCAGCGTGGCCATTCCTTCTTAGCGTCATACGGCATCTGGTT
GGGGACAATCACCACAGCAGGAATGATGCATTTTCAAATTGTAATGTGCG
GAAACTGCAGCAATTACACTCCTCTCCCGATTCTGAGTCAACGGGGTCTG
AATAAGAAGCAATGATGACTCGGCTTACGGTACGGCACGAAGCACGCACA
AGACAGACCACAGCAGTCGTAGTAGCTTACGAGACCTTTTACCGGTCACA
AGGCCAGCTGTGGTGGGTTGAATGTAGCGAAGACGTAAACTACTGATGAA
TAAAGGGCGGAGGTGTTATCTGGTGCGTTGTATCTAATTGTCTTTTCACT
ATTACTGACGGTCACGTTGTCCTGGTGGTCTAGCTCTTGTGTCTGCGCGC
GCAAGTCTTCCTTTTTTACTCCACAGTAGTCAGTAGTACAGGCTAGAAGC
CAATGTATTACTATCTTTGGGTGCAGAATGTGTGAAAATGCAGACAGGTG
GGTTTACGCCCATAGAAGCAATTAAGTAGACATAACTGTTATAATCGCGT
ATACTCGAAAATGCGCATTTGTAGCACGGGATTTCGCTCTATCGGAAAAC
CCTGTAAACGTCATTTTCCGTCGTCGTCTTAACGTAAGCCCTTCGTATCA
CCTCGCAACAAAACGTTTTTATCGTTTTGACGTCGACAGTTTTTTGCAGA
ATCAGCAACAATTCGAGTCGACAAACCGTGCATCTTGCCCCCGTTCCGCC
CTCAAACACAAGCACAAAACTGCTGCTATCATGATGAGACACATAACAAT
ACTGTCCCGTACTCCCCCTTAACTGTGTCAATTTGTGGAATCAGTCATCA
CTCAGCAGTCTAAATTGCATGAGCGTACGTCCAGTTTTGGTTGATGGATT
GATGAAAGGATTTTTGTCCCCATATTTCCTCTTTGTACTTGAACATGTTT
TAAGCCGTATTCCTGTGTTATAGGAGTCGTCCTTGGCATTGCTACTGTCG
ATACTATCTTGTGGTTGATGTTTAGGGTTCCTGGTTTTGCTTCAAGGTCG
CTGTTTGGTTCTCTTGTAAACTGTGGCCTTTTCAGCCATCAAATTCTGCA
GACTCAGTCTTGGAATATTATCACACCAATCGATCATTCTATGGTGTTCT
TATCTGCAGATTGCATTAAGCAGTAGCAGAATGAATGTAGTAGTGTTATA
ATCGACAGGGGAGCAGGTACTTGTTCGCGTATAGCACTCCTGGCCAAGTT
TACATCAATCCTTCGCAATAACCCCGGCCTTCAGGATAGCTACCCACTCA
TTGTCGTTAGGGTTACCAATTTACTGCCGTGTTATATGCTGCAAAAATTC
CATCCGGTCTTACAATATCCATCCGCTATCATATCTTCATTGTGTGCTCA
CCTGTGAGATATAGGTCATGCAAACGCATAAACATGTATTATATTTTGTA
TGCATACTGATTTTATCATGCCCCCTTCCCTCCCCGCCTGGGCTTGTAAA
TCGTAATTTACGCTCAAATATCGCCAGCGGTTCTCGCCAGTGGCAACCAC
GCAATGGTACCTGGAGGGAGTCTTGAGCTACGGGTCTAGGGGTTTCCAAA
AGGCATCGACTTCCTTCTCCCCCGACGCGTTAGCTGTGGTGAGCAGTTGG
TCGAACGCCTGCACGTATTGTACCGTAAACATGCGTACGCCACATGGCTC
GCTGTTCACTACAGTACAGACAGTATCCTACTGTACCTTTTACACGGGTA
TATCTTGTATAACTCTCCCTGCACTGTACCCTCCAAGTGCATGCTGTACA
CCGCTCGCTGTTATATCCGTTAAAATGCTATGCCGTGTCGTACTGTGCTG
TGCTGTGCTGCAGTGTACTGTACTATAGCTTGAAAACCAAGACACACTGT
GTCCGTTCGGTATGCGCTGTACGCTCTAAATGAAGGACATGCGCGGTAAG
GTGACTTGCGTAACCGGGGCGAACTCCGGCATCGGCTACAGTGTTGCCAA
ATCGCTGGCCGCGAGAAACGCGAATGTGCATATGATTTGCAGAAATCAGG
CGAGGGGAGAGGAGGCAAGGAGTCGAGTGGTGACCGAGACGGGCAACGAA
AACGTTCATTTGCATGTCTTGGACGTTTCCGACTTCTGCCAGGTACTGTA
CAGGCGGCTTGCGAATTTTACAGTAGGTGATGGCGTTGTTTCTTGGGATA
TTTTTATGAGCAGAACTATCGACAGCGCACGACCTAACTTTTGAATTGTG
ATAGTGTGCGTATGCATGTTAAGGTGGTTATGTTTGGCGGAACGTATCTC
ACCCTTACTATCGACGGAGATTCACTGAGTGTTATTAATATCGACGGGAA
TTCAAAGTGTCATAGGTTCATATGAGCTACTCCGAAGCATTTTCCCATTT
TTGTATCAGAATTAATGGCCGCTCAAGGTCAGACTAATTTTTACATTTTT
TCCCT
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Coding sequence (CDS) from alignment at H-paniculata_contig9429:1887..4641+

>mRNA_H-paniculata_contig9429.17183.1 ID=mRNA_H-paniculata_contig9429.17183.1|Name=mRNA_H-paniculata_contig9429.17183.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at H-paniculata_contig9429:1887..4641+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGCTGATGGTGCTGCGGTTCTCGCCAGTGGCAACCACGCAATGGTA
CCTGGAGGGAGTCTTGAGCTACGGGTCTAGGGGTTTCCAAAAGGCATCGA
CTTCCTTCTCCCCCGACGCGTTAGCTGTGCGGTTCTCGCCAGTGGCAACC
ACGCAATGGTACCTGGAGGGAGTCTTGAGCTACGGGTCTAGGGGTTTCCA
AAAGGCATCGACTTCCTTCTCCCCCGACGCGTTAGCTGTGGACATGCGCG
GTAAGGTGACTTGCGTAACCGGGGCGAACTCCGGCATCGGCTACAGTGTT
GCCAAATCGCTGGCCGCGAGAAACGCGAATGTGCATATGATTTGCAGAAA
TCAGGCGAGGGGAGAGGAGGCAAGGAGTCGAGTGGTGACCGAGACGGGCA
ACGAAAACGTTCATTTGCATGACATGCGCGGTAAGGTGACTTGCGTAACC
GGGGCGAACTCCGGCATCGGCTACAGTGTTGCCAAATCGCTGGCCGCGAG
AAACGCGAATGTGCATATGATTTGCAGAAATCAGGCGAGGGGAGAGGAGG
CAAGGAGTCGAGTGGTGACCGAGACGGGCAACGAAAACGTTCATTTGCAT
GACTTCTGCCAGGTACTGTACAGGCGGCTTGCGAATTTTACAGTAGGTGA
TGGCGTTGTTTCTTGGGATATTTTTATGAGCAGAACTATCGACAGCGCAC
GACCTAACTTTTGAGACTTCTGCCAGGTACTGTACAGGCGGCTTGCGAAT
TTTACAGTAGGTGATGGCGTTGTTTCTTGGGATATTTTTATGAGCAGAAC
TATCGACAGCGCACGACCTAACTTTTGA
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