prot_H-paniculata_contig9425.17182.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9425.17182.1
Unique Nameprot_H-paniculata_contig9425.17182.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: D8LHW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 7.100e-64
Identity = 107/116 (92.24%), Postives = 112/116 (96.55%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 116
            +RAQKKGYEEVHVPAVKHIPV+GE L+PIEDLP W +PAFKGMEKLNRIQSKM +AALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV
Sbjct:  483 WRAQKKGYEEVHVPAVKHIPVEGEKLIPIEDLPKWAQPAFKGMEKLNRIQSKMQEAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 598          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A7S0Z8P7_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z8P7_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 6.670e-47
Identity = 80/117 (68.38%), Postives = 100/117 (85.47%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPV-DGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 116
            FR+ KKGYEEVH+PA+K  P  D E L PIE++P+W  PAF+GM+ LNRIQS++++ ALLSPEN+LLCAPTGAGKTNVA+MT+LHE+G HR+ DG+ID  +FKIVYVAPMKALV E+
Sbjct:  457 FRSAKKGYEEVHIPALKPKPFNDDEALRPIEEMPEWAWPAFEGMKSLNRIQSRVYECALLSPENMLLCAPTGAGKTNVAMMTILHEVGLHRRRDGSIDTSAFKIVYVAPMKALVAEI 573          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A7S3Y2E0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2E0_HETAK)

HSP 1 Score: 160 bits (404), Expect = 6.810e-47
Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 116
            +RAQKKGYEEVHVPA K      EVLV +E+LP W + AF GM  LNR+QSKM+KAA     NLLLCAPTGAGKTNVA++ ML+ +GQH K+DG++D+D+FKIVYVAPMKALVQEV
Sbjct:   36 WRAQKKGYEEVHVPARKTAVPPDEVLVDVEELPAWAQKAFDGMATLNRVQSKMYKAAFEDQGNLLLCAPTGAGKTNVAMLCMLNLLGQHLKDDGSVDLDAFKIVYVAPMKALVQEV 151          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A454XRE1_OSTTA (Sec63 Brl domain-domain-containing protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454XRE1_OSTTA)

HSP 1 Score: 169 bits (428), Expect = 2.310e-46
Identity = 80/117 (68.38%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPV-DGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 116
            FR  KKGYEEVH+PA K  P  DGEVL  IE++P W  PAF+GM+ LNR+QS++++ ALLSPEN+LLCAPTGAGKTNVA++T+LHEIG HR+ DGT+D  +FKIVYVAPMKALV E+
Sbjct:  450 FRNAKKGYEEVHIPASKPKPFEDGEVLRSIEEMPSWTHPAFEGMKSLNRVQSRVYECALLSPENMLLCAPTGAGKTNVAVLTILHEIGLHRRRDGTVDTSAFKIVYVAPMKALVSEI 566          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A835YNN3_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN3_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.310e-46
Identity = 82/118 (69.49%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHR--KEDGTIDVDSFKIVYVAPMKALVQEV 116
            +RAQKKGYEEVHVPA++H+  +GE+LVPI DLP W +PAF GM+KLNRIQS+M  AAL   +NLLLCAPTGAGKTNVA++ MLHEIGQHR    +  +D+D+FK+VY+APMKALVQEV
Sbjct:  487 WRAQKKGYEEVHVPALRHVAPEGELLVPIADLPAWTQPAFTGMDKLNRIQSRMKDAALNGGDNLLLCAPTGAGKTNVAMLAMLHEIGQHRYVTVNVPVDLDTFKMVYIAPMKALVQEV 604          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A7S2FFX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFX4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.080e-46
Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQE 115
            +RAQKKGYEEVHVPAVKHIP  GE LV +  LP WC+PAF G++ LNRIQSKM   AL + ENL+LCAPTGAGKTNVA+M ML+ + QHR+ DG+ D+D+FKIVYVAPMKALVQE
Sbjct:  345 WRAQKKGYEEVHVPAVKHIPA-GEKLVAVTSLPTWCQPAFTGIKHLNRIQSKMKTTALETSENLILCAPTGAGKTNVAMMCMLNVLAQHRRSDGSFDLDAFKIVYVAPMKALVQE 458          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: A0A7S2BE45_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BE45_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.290e-46
Identity = 82/115 (71.30%), Postives = 96/115 (83.48%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQE 115
            +RAQKKGYEEVHVPAVKHIP  GE LV +  LP WC+PAF G++ LNRIQSKM   AL + ENL+LCAPTGAGKTNVA+M ML+ + QHR+ DG+ D+D+FKIVYVAPMKALVQE
Sbjct:  345 WRAQKKGYEEVHVPAVKHIPA-GEKLVAVTSLPTWCQPAFTGIKHLNRIQSKMKTTALETSENLILCAPTGAGKTNVAMMCMLNVLAQHRRSDGSFDLDAFKIVYVAPMKALVQE 458          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: R1DUR0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DUR0_EMIHU)

HSP 1 Score: 168 bits (425), Expect = 5.850e-46
Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIP-VDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQEV 116
            FR  KKGYEEVHVPA+K  P  DGE LV I+D+P W +PAF GM  LNR+QS+++  AL S EN+LLCAPTGAGKTNVA++T+LHEIG HR+ DG+ D+D+FKIVYVAPMKALVQE+
Sbjct:  453 FRVAKKGYEEVHVPALKAKPFTDGEALVRIDDMPAWARPAFGGMSSLNRVQSRVYDCALFSAENMLLCAPTGAGKTNVAMLTLLHEIGLHRQPDGSFDLDAFKIVYVAPMKALVQEM 569          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: K8YVZ6_NANGC (Pre-mRNA-splicing helicase BRR2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVZ6_NANGC)

HSP 1 Score: 167 bits (424), Expect = 7.940e-46
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQE 115
            +RA KKGYEEVHVPAVKH+P   E LV IE+LP W   AF+GM  LNR+QSKM  +AL S ENLLLCAPTGAGKTNVA++ +L+EIGQH +EDG++D+D+FKIVYVAPMKALVQE
Sbjct:   30 WRALKKGYEEVHVPAVKHVPDANERLVEIEELPAWTHRAFEGMTMLNRVQSKMCSSALYSSENLLLCAPTGAGKTNVAMLCILNEIGQHLREDGSVDLDAFKIVYVAPMKALVQE 144          
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Match: W7TFU8_9STRA (U5 small nuclear ribonucleoprotein helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFU8_9STRA)

HSP 1 Score: 167 bits (424), Expect = 7.990e-46
Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 0
Query:    1 FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQSKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDSFKIVYVAPMKALVQE 115
            +RA KKGYEEVHVPAVKH+P   E LV IE+LP W   AF+GM  LNR+QSKM  +AL S ENLLLCAPTGAGKTNVA++ +L+EIGQH +EDG++D+D+FKIVYVAPMKALVQE
Sbjct:  469 WRALKKGYEEVHVPAVKHVPDANERLVEIEELPAWTHRAFEGMTMLNRVQSKMCSSALYSSENLLLCAPTGAGKTNVAMLCILNEIGQHLREDGSVDLDAFKIVYVAPMKALVQE 583          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9425.17182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHW4_ECTSI7.100e-6492.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0Z8P7_9CHLO6.670e-4768.38Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A7S3Y2E0_HETAK6.810e-4768.10Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A454XRE1_OSTTA2.310e-4668.38Sec63 Brl domain-domain-containing protein n=2 Tax... [more]
A0A835YNN3_9STRA2.310e-4669.49Sec63 Brl domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2FFX4_9STRA4.080e-4671.30Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2BE45_9STRA4.290e-4671.30Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
R1DUR0_EMIHU5.850e-4668.38Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
K8YVZ6_NANGC7.940e-4671.30Pre-mRNA-splicing helicase BRR2 n=1 Tax=Nannochlor... [more]
W7TFU8_9STRA7.990e-4671.30U5 small nuclear ribonucleoprotein helicase n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..118
NoneNo IPR availableGENE3D3.40.50.300coord: 22..118
e-value: 6.1E-29
score: 102.9
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..116
NoneNo IPR availablePANTHERPTHR12131:SF12coord: 1..116
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 48..116
e-value: 2.3E-9
score: 37.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9425contigH-paniculata_contig9425:776..1733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9425.17182.1mRNA_H-paniculata_contig9425.17182.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9425 776..1733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9425.17182.1 ID=prot_H-paniculata_contig9425.17182.1|Name=mRNA_H-paniculata_contig9425.17182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
FRAQKKGYEEVHVPAVKHIPVDGEVLVPIEDLPDWCKPAFKGMEKLNRIQ
SKMHKAALLSPENLLLCAPTGAGKTNVALMTMLHEIGQHRKEDGTIDVDS
FKIVYVAPMKALVQEVRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase