mRNA_H-paniculata_contig9359.17134.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9359.17134.1
Unique NamemRNA_H-paniculata_contig9359.17134.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A6H5KAD0_9PHAE (Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAD0_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 2.040e-194
Identity = 274/337 (81.31%), Postives = 291/337 (86.35%), Query Frame = 1 
Query:    1 EQVHMVGECPGDYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            ++VH+VGECP +YPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFR EGFLYLQ+P+ITASDCEGAGEMFRVTTLPS+VS+VPTL DGS DY++DFFGKPAFLTVSGQLS ET+ACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEM+FADL DDMDNAEAFVKHVVSH M+VCG DL FFN+FYDK LL+RLQRIKDKPFVR                                 TEHERWLAETRY+TAVFVYDYPRDIKAFYMRDN+DGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEF L P DYWWYNDLRRY
Sbjct:  209 QEVHVVGECPTEYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFRAEGFLYLQSPIITASDCEGAGEMFRVTTLPSEVSKVPTLEDGSTDYAQDFFGKPAFLTVSGQLSGETHACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMSFADLRDDMDNAEAFVKHVVSHAMEVCGSDLEFFNKFYDKELLQRLQRIKDKPFVRVRYADAVTALQEEIAKDPSKWAFPDVSFGTDLQTEHERWLAETRYNTAVFVYDYPRDIKAFYMRDNDDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFNLSPDDYWWYNDLRRY 545
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A835Z2U2_9STRA (Asparagine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U2_9STRA)

HSP 1 Score: 471 bits (1211), Expect = 1.130e-162
Identity = 238/336 (70.83%), Postives = 267/336 (79.46%), Query Frame = 1 
Query:    4 QVHMVGECPGDYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            ++ ++GECPGDYPLQKKRH+LEFLRG+AHLRPRTNTI AVARVRSALA ATH FF+ EGF YLQ PLITASDCEGAGEMFRVTTLP   +  PT   G++D+++DFFG+PA+LTVSGQLSAET+ACALGDVYTFGPTFRAENSQTTRHLAEF MIEPEMAFADL DDMDNAEAFVKHVVSHV+  C  DL+FF  FYDK L ++LQR+ D+PF R                                 TEHERWLAE +++TA FVY+YPR IKAFYMRDNEDG TVAAMDLLVPGVGELIGGSQREERL  LEAK+ EF L+PKDYWWY DLR+Y
Sbjct:  120 EISVLGECPGDYPLQKKRHSLEFLRGMAHLRPRTNTIGAVARVRSALAFATHQFFQGEGFQYLQTPLITASDCEGAGEMFRVTTLPP--ASPPTDDAGAVDFAKDFFGRPAYLTVSGQLSAETHACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLIDDMDNAEAFVKHVVSHVLQNCRSDLDFFAGFYDKGLFDKLQRLVDQPFARIEYTAAVKLLQEEIAMDPSQWQFPDVSFGTDLQTEHERWLAEKKFNTATFVYNYPRTIKAFYMRDNEDGATVAAMDLLVPGVGELIGGSQREERLGVLEAKLREFGLDPKDYWWYLDLRKY 453
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S2MHU0_9STRA (Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHU0_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 3.680e-153
Identity = 230/336 (68.45%), Postives = 258/336 (76.79%), Query Frame = 1 
Query:    7 VHMVGECPG-DYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            V +VG C G +YPLQKKRH+LEFLR IAHLR RTNTIAAVARVRS LA ATH++F++ GF +LQ+PLITASDCEGAGEMFRVTTLPS+V+++PT  DG +DY EDFFGK A+LTVSGQLSAETYA ALGDVYTFGPTFRAENSQTTRHLAEF MIEPE+AF DL   MDNAE FVK VVS  +  C  DL+FFNQFYDKSL+ERLQR+ ++PF R                                 TEHERWL+ET + TA FV+ YPR IKAFYMRDNEDG+TVAAMDLLVPGVGELIGGSQREERL  L+ KM E  L  +DYWWY DLRRY
Sbjct:  168 VEVVGTCKGKEYPLQKKRHSLEFLREIAHLRARTNTIAAVARVRSVLAFATHEYFQDLGFHFLQSPLITASDCEGAGEMFRVTTLPSEVAKIPTTDDGMVDYKEDFFGKAAYLTVSGQLSAETYASALGDVYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQSMDNAENFVKFVVSQALAKCRDDLDFFNQFYDKSLIERLQRVVNEPFARVSYREAISLLQTEISKDPSKWSFPDVVFGTDLQTEHERWLSETHFGTATFVHGYPRGIKAFYMRDNEDGETVAAMDLLVPGVGELIGGSQREERLSVLQDKMAELNLNEEDYWWYLDLRRY 503
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S2XZ42_9STRA (Asparagine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ42_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 2.860e-151
Identity = 224/337 (66.47%), Postives = 258/337 (76.56%), Query Frame = 1 
Query:    4 QVHMVGECPGD-YPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            +V ++G CP + YPLQKKR +LEFLR  AHLRPRTNTIAAVARVRSALAQ+TH FF+++GF YLQ+PLITASDCEGAGEMFRVTTLPS++  +P   DG +D+++DFFGKPAFLTVSGQLSAET+ACALGDVYTFGPTFRAENSQT RHLAEF MIEPEMAF +L ++MDNAE +VK+VV HV+D CG DL FF +FY+K LL+RL  +  KPF R                                 TEHERWL E  +  A FVY+YPRDIKAFYMRDN DGKTVAAMDLLVPG+GELIGGSQREERL+ L  KM EF+L   DYWWY DLRR+
Sbjct:  205 EVKLLGACPAEGYPLQKKRASLEFLRTNAHLRPRTNTIAAVARVRSALAQSTHRFFQDKGFFYLQSPLITASDCEGAGEMFRVTTLPSKIENMPKTEDGELDFTKDFFGKPAFLTVSGQLSAETHACALGDVYTFGPTFRAENSQTARHLAEFNMIEPEMAFTNLQENMDNAEEYVKYVVQHVLDNCGDDLEFFKKFYNKELLDRLDVLVSKPFARVEYTKAIELLVEEIAKDPSQWQFPDVKFGTDLQTEHERWLCEKHFGCATFVYNYPRDIKAFYMRDNADGKTVAAMDLLVPGIGELIGGSQREERLDVLLEKMKEFDLNEDDYWWYLDLRRF 541
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: W7TW83_9STRA (Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TW83_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 3.050e-151
Identity = 229/340 (67.35%), Postives = 260/340 (76.47%), Query Frame = 1 
Query:    1 EQVHMVGEC-PGDYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLP--DGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            E V +VG C P  YPLQKKRHTLEFLRGIAHLRPRTNT+AAVARVRSALA ATH+FF+E+GF YLQ+P+ITASDCEGAGEMFRVTTLP +VSE+P +   +  IDYS DFFG PA+LTVSGQLS E YACA+GDVYTFGPTFRAENSQTTRHLAEF MIEPEMAFADL D+M NAEA+VK +V HV+  C  DL FF +FYDK+L+ RL  +  + F R                                 TEHERWL E ++  A FVY+YPR+IKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERL +LEAK+ EF L+ +DYWWY DLRR+
Sbjct:  204 ESVEVVGGCDPEAYPLQKKRHTLEFLRGIAHLRPRTNTLAAVARVRSALAFATHNFFQEQGFYYLQSPIITASDCEGAGEMFRVTTLPDKVSELPRVEGEEDRIDYSHDFFGAPAYLTVSGQLSGEAYACAMGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLQDNMRNAEAYVKAIVRHVLKECEEDLAFFEKFYDKTLMARLNTLVSESFARVEYTEAVRLLQEEIAKDRGAWQFPDVDFGTDLQTEHERWLCEKKFQRATFVYNYPREIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLGRLEAKLEEFGLDKEDYWWYLDLRRF 543
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S4D5P5_HETAK (Asparagine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P5_HETAK)

HSP 1 Score: 441 bits (1134), Expect = 1.120e-150
Identity = 228/340 (67.06%), Postives = 256/340 (75.29%), Query Frame = 1 
Query:    1 EQVHMVGECPGD-YPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGS--IDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            + V +VGECPGD YPLQKKR ++EFLR  AHLRPRTNTIAAVARVRS LA ATH+FF+ +GF YLQ PLITASDCEGAGEMFRV+TLPS++SE+P   D    +D+  DFFG  AFLTVSGQL+AETYACALGDVYTFGPTFRAENSQTTRHLAEF MIEPEMAFADL DDM NAEAFVKHV          DL FF QF+DK L  RL+R++D+PF R                                 TEHERWL+E ++ TA FVY+YPR IKAFYMRDNEDG+TVAAMDLLVPGVGELIGGSQREERL+ L AKM E  L+P+DYWWY DLRR+
Sbjct:  136 DAVQLVGECPGDSYPLQKKRASMEFLREKAHLRPRTNTIAAVARVRSQLAYATHNFFQGQGFQYLQTPLITASDCEGAGEMFRVSTLPSRISELPRREDDPDRVDFGRDFFGAEAFLTVSGQLNAETYACALGDVYTFGPTFRAENSQTTRHLAEFNMIEPEMAFADLADDMANAEAFVKHVXXXXXXXXXXDLQFFQQFFDKGLTARLERVRDQPFARVEYREAVALLQEEIAKDRSKWQYPDVEFGTDLQTEHERWLSEAKFGTATFVYNYPRGIKAFYMRDNEDGETVAAMDLLVPGVGELIGGSQREERLDVLLAKMAELGLDPEDYWWYLDLRRF 475
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S0YYM8_9CRYP (Asparagine--tRNA ligase (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YYM8_9CRYP)

HSP 1 Score: 440 bits (1131), Expect = 2.450e-150
Identity = 219/315 (69.52%), Postives = 249/315 (79.05%), Query Frame = 1 
Query:    1 EQVHMVGECPGD-YPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQL 843
            ++V +VG+C G+ YPLQKKRHTLEFLRGIAHLRPRTNTIA+V+RVRSALAQATH FF+ +GF Y+Q PLITASDCEGAGE+FRVTTLPS+VS++P    G IDYSEDFF KPA+LT SGQLSAETYA ALGDVYTFGPTFRAENSQTT+HLAEFWMIEPE+AF DL  DM NAE FVK+VV HV+D C  DL+FFNQFYDK LLERL  + +KPF R                                 TEHERWL+ET++  A FVY+YPR+IKAFYMRDN+DGKTVAAMDLLVPG+GELIGGSQREERL+ L
Sbjct:  192 DEVELVGDCSGEEYPLQKKRHTLEFLRGIAHLRPRTNTIASVSRVRSALAQATHQFFQGKGFFYVQTPLITASDCEGAGELFRVTTLPSEVSKIPKTEGGQIDYSEDFFSKPAYLTCSGQLSAETYASALGDVYTFGPTFRAENSQTTKHLAEFWMIEPELAFCDLEGDMQNAEDFVKYVVKHVIDTCPEDLDFFNQFYDKGLLERLDALVNKPFARVTYTEAVELLQEEIAKDPSKWQFPDVKFGTDLQTEHERWLSETKFGAATFVYNYPREIKAFYMRDNDDGKTVAAMDLLVPGIGELIGGSQREERLDVL 506
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S0DYW5_9EUKA (Asparagine--tRNA ligase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYW5_9EUKA)

HSP 1 Score: 430 bits (1105), Expect = 2.210e-146
Identity = 217/337 (64.39%), Postives = 252/337 (74.78%), Query Frame = 1 
Query:    4 QVHMVGECPG-DYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            ++ +VG C G  YP+QKK+ +LEFLR IAHLR RTN+IAAVARVRS LAQATH FF+ EGF Y+Q PLITASDCEGAGEMFRVTTLP++   VP   D  +DYS+DFFGKPAFLTVSGQLSAET ACALGDVYTFGPTFRAE+S T RHLAEFWMIEPEMAFADL DDMDNAEAFVK  V+  ++ C  DL FF+QFY+K LL++L+ + + PF R                                 TEHERW++E  +    FVYDYP++IKAFYMRDN DGKTVAAMDLLVPG+GELIGGSQREERL +L+ KM E +L+ + YWWY DLRRY
Sbjct:  132 RIELVGACDGATYPIQKKKTSLEFLRSIAHLRARTNSIAAVARVRSTLAQATHQFFQGEGFRYVQTPLITASDCEGAGEMFRVTTLPAEPELVPLTADKKVDYSQDFFGKPAFLTVSGQLSAETMACALGDVYTFGPTFRAEDSNTGRHLAEFWMIEPEMAFADLQDDMDNAEAFVKFAVAQALEHCPDDLEFFDQFYEKGLLDKLKGLLEGPFGRVRYEDAVGMVAAEIAKDPSKWEFPECEFGTDLATEHERWISEVAFGKPTFVYDYPKEIKAFYMRDNPDGKTVAAMDLLVPGIGELIGGSQREERLGELQRKMAEQDLDEEAYWWYLDLRRY 468
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: A0A7S2RZ04_9STRA (Asparagine--tRNA ligase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ04_9STRA)

HSP 1 Score: 418 bits (1074), Expect = 1.430e-144
Identity = 211/310 (68.06%), Postives = 239/310 (77.10%), Query Frame = 1 
Query:   82 IAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            +AHL PRTNTIAAVARVRS LA ATH++F++ GF YLQ+PLITASD EGAGEMFRVTTLPS V+ +P   DG ID+SEDFFGK A+LTVSGQLS E YACALGD+YTFGPTFRAENSQTTRHLAEF MIEPE+AF DL  +MDNAE FVK VV   ++ CG DL+FFNQF DK LLERL ++ D+PF R                                 TEHERWLAET++ TA FVYDYPRDIKAFYMRDN DGKTVAAMDLLVPGVGELIGGSQREERL+ L+AKM +F+L+ +DYWWY DLR+Y
Sbjct:    2 LAHLLPRTNTIAAVARVRSVLAFATHEYFQQLGFHYLQSPLITASDTEGAGEMFRVTTLPSDVAALPKTKDGQIDFSEDFFGKAAYLTVSGQLSGEVYACALGDIYTFGPTFRAENSQTTRHLAEFHMIEPEIAFCDLDQNMDNAEGFVKFVVQRALEKCGDDLSFFNQFIDKGLLERLNKVVDEPFARVSYSEAVALLQEEIAKDPSKWQFPDVEFGTDLQTEHERWLAETKFGTATFVYDYPRDIKAFYMRDNTDGKTVAAMDLLVPGVGELIGGSQREERLDVLKAKMKDFDLQEEDYWWYLDLRKY 311
[Close]
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Match: B7G8H8_PHATC (Asparagine--tRNA ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8H8_PHATC)

HSP 1 Score: 422 bits (1085), Expect = 6.180e-144
Identity = 217/347 (62.54%), Postives = 258/347 (74.35%), Query Frame = 1 
Query:    7 VHMVGECPGD-YPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHDFFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGS---------IDYSEDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFWMIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLERLQRIKDKPFVR---------------------------------TEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNED--GKTVAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY 912
            + +VG CP + YPL KKRHTLE+LR IAHLRPRTNTIAAVARVRS LA A H FF+ +GF+Y+Q PL+TASDCEGAGE+FRVTTL   +  V TLP            +DYSEDFFGKPA+LTVSGQL  ET+ACALGD+YTFGPTFRAENSQT+RHLAEF M+EPEMAFADLT  M+NAE  +K+VV HV+D CG DL FF +FYDK+L+ RL+++  KPFVR                                 TEHERWLAET++++AVFVY+YP+ IKAFYMRDNE+  G+TV AMDLLVPGVGELIGGSQREERL+ LE K+ +  L+ +DYWWY DLRR+
Sbjct:   83 LRVVGACPAETYPLAKKRHTLEYLRSIAHLRPRTNTIAAVARVRSHLAGAIHAFFQTQGFVYVQTPLVTASDCEGAGELFRVTTL--NLDSVSTLPKAKNENGKEQDRVDYSEDFFGKPAYLTVSGQLGGETHACALGDIYTFGPTFRAENSQTSRHLAEFHMVEPEMAFADLTSAMNNAENMLKYVVQHVLDSCGEDLEFFQKFYDKALMTRLEKLVQKPFVRVSYREAIEFLQEEINKDPSKWQFPDVSFGTDLATEHERWLAETKFESAVFVYNYPKAIKAFYMRDNEEDGGETVNAMDLLVPGVGELIGGSQREERLDVLEQKIADVGLDKEDYWWYLDLRRF 427
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9359.17134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAD0_9PHAE2.040e-19481.31Asparagine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2U2_9STRA1.130e-16270.83Asparagine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2MHU0_9STRA3.680e-15368.45Asparagine--tRNA ligase n=1 Tax=Dictyocha speculum... [more]
A0A7S2XZ42_9STRA2.860e-15166.47Asparagine--tRNA ligase n=1 Tax=Fibrocapsa japonic... [more]
W7TW83_9STRA3.050e-15167.35Asparagine--tRNA ligase n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4D5P5_HETAK1.120e-15067.06Asparagine--tRNA ligase n=1 Tax=Heterosigma akashi... [more]
A0A7S0YYM8_9CRYP2.450e-15069.52Asparagine--tRNA ligase (Fragment) n=1 Tax=Hemisel... [more]
A0A7S0DYW5_9EUKA2.210e-14664.39Asparagine--tRNA ligase n=1 Tax=Phaeocystis antarc... [more]
A0A7S2RZ04_9STRA1.430e-14468.06Asparagine--tRNA ligase (Fragment) n=1 Tax=Rhizoch... [more]
B7G8H8_PHATC6.180e-14462.54Asparagine--tRNA ligase n=2 Tax=Phaeodactylum tric... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9359contigH-paniculata_contig9359:698..9576 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score424.5
Seed ortholog evalue4.2e-116
Seed eggNOG ortholog2850.Phatr42247
KEGG rclassRC00055,RC00523
KEGG koko:K01893
KEGG ReactionR03648
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.OB-fold nucleic acid binding domain
EggNOG OGs2XBAQ@2836,COG0017@1,KOG0554@2759
EC6.1.1.22
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons7
Model size912
Cds size900
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9359.17134.1prot_H-paniculata_contig9359.17134.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9359 710..9576 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931164.4172063-UTR-H-paniculata_contig9359:697..7091622931164.4172063-UTR-H-paniculata_contig9359:697..709Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9359 698..709 +
1691481619.3542247-UTR-H-paniculata_contig9359:697..7091691481619.3542247-UTR-H-paniculata_contig9359:697..709Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9359 698..709 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931164.4383228-CDS-H-paniculata_contig9359:709..8471622931164.4383228-CDS-H-paniculata_contig9359:709..847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 710..847 +
1691481619.366778-CDS-H-paniculata_contig9359:709..8471691481619.366778-CDS-H-paniculata_contig9359:709..847Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 710..847 +
1622931164.4618993-CDS-H-paniculata_contig9359:1456..15731622931164.4618993-CDS-H-paniculata_contig9359:1456..1573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 1457..1573 +
1691481619.37848-CDS-H-paniculata_contig9359:1456..15731691481619.37848-CDS-H-paniculata_contig9359:1456..1573Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 1457..1573 +
1622931164.4793086-CDS-H-paniculata_contig9359:4524..46141622931164.4793086-CDS-H-paniculata_contig9359:4524..4614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 4525..4614 +
1691481619.3888955-CDS-H-paniculata_contig9359:4524..46141691481619.3888955-CDS-H-paniculata_contig9359:4524..4614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 4525..4614 +
1622931164.5108933-CDS-H-paniculata_contig9359:5304..54631622931164.5108933-CDS-H-paniculata_contig9359:5304..5463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 5305..5463 +
1691481619.405043-CDS-H-paniculata_contig9359:5304..54631691481619.405043-CDS-H-paniculata_contig9359:5304..5463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 5305..5463 +
1622931164.5368497-CDS-H-paniculata_contig9359:6000..61321622931164.5368497-CDS-H-paniculata_contig9359:6000..6132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 6001..6132 +
1691481619.4159417-CDS-H-paniculata_contig9359:6000..61321691481619.4159417-CDS-H-paniculata_contig9359:6000..6132Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 6001..6132 +
1622931164.5561113-CDS-H-paniculata_contig9359:8443..85911622931164.5561113-CDS-H-paniculata_contig9359:8443..8591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 8444..8591 +
1691481619.427784-CDS-H-paniculata_contig9359:8443..85911691481619.427784-CDS-H-paniculata_contig9359:8443..8591Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 8444..8591 +
1622931164.5720062-CDS-H-paniculata_contig9359:9460..95761622931164.5720062-CDS-H-paniculata_contig9359:9460..9576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 9461..9576 +
1691481619.4400601-CDS-H-paniculata_contig9359:9460..95761691481619.4400601-CDS-H-paniculata_contig9359:9460..9576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9359 9461..9576 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9359.17134.1

>prot_H-paniculata_contig9359.17134.1 ID=prot_H-paniculata_contig9359.17134.1|Name=mRNA_H-paniculata_contig9359.17134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
MVGECPGDYPLQKKRHTLEFLRGIAHLRPRTNTIAAVARVRSALAQATHD
FFREEGFLYLQAPLITASDCEGAGEMFRVTTLPSQVSEVPTLPDGSIDYS
EDFFGKPAFLTVSGQLSAETYACALGDVYTFGPTFRAENSQTTRHLAEFW
MIEPEMAFADLTDDMDNAEAFVKHVVSHVMDVCGPDLNFFNQFYDKSLLE
RLQRIKDKPFVRTEHERWLAETRYDTAVFVYDYPRDIKAFYMRDNEDGKT
VAAMDLLVPGVGELIGGSQREERLEQLEAKMVEFELEPKDYWWYNDLRRY
back to top

mRNA from alignment at H-paniculata_contig9359:698..9576+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9359.17134.1 ID=mRNA_H-paniculata_contig9359.17134.1|Name=mRNA_H-paniculata_contig9359.17134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8879bp|location=Sequence derived from alignment at H-paniculata_contig9359:698..9576+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCAGGTGCACATGGTCGGAGAGTGTCCGGGAGATTATCCACTCCAGAA
GAAGCGCCACACGTTAGAGTTTCTCAGGGGGATCGCGCACCTTCGGCCGC
GGACGAATACTATCGCCGCCGTAGCTAGGGTTCGGTCTGCTCTCGCACAG
GTGAGTGGCTCGCTGGCTGCGTGATACAGGGTGAGTATATGGGTGAGTGC
TAAGTGGGTGAATGAGCAGGCTTTCTCATCTGGATGCGCTGTACAGTGTC
TATAGGGATACGGAATAAATCCGTGGGCGAGTGCGAGTGAAAGGGCGTGG
ACGGGTGGTCAGAGGTGAAGGGCGGTCGTGGGGTTGATGGGTTCGTTTTG
GGAATGTTTTTTTCATTAAGTACATCGTTAATTGTCTCCGTATGTGGATA
TGATCCGAGTGCTCCCGCGATGATGGGTTGGTGATCAGCTTCTCGGAGCA
GGATTTGTGTACTTTTAACCGACTCTCGAGTACTTCCGCGGCGTATCTAG
TCGGTGGTCGTCTCTAACTAGTGCAATAGTAATCTTTGGTAGGGACAGTA
CACAAATAGCTAGCTTTACATACGAAGCCCAATAACTAAGGTTGCGGGTG
AAAATATTGCTCATAATGAACGACTAACTGAATGGCGTTACAGACAGGCA
GTACAACACATATATATACATATATACATATACGTATTTACAGTCGTTGT
TTTTGATCGTTGTTAGCAATTACGCTTGTTTTGTACCTCTGCTGTGCCGA
CGGATGCAGGCTACACATGACTTCTTCCGAGAGGAGGGCTTCTTGTACCT
GCAGGCTCCTCTCATCACGGCCTCCGATTGCGAGGGCGCCGGGGAGATGT
TCCGCGTGACTACTCTGCCGTCACAGGTGCACACCTATACCCGATATTGT
TCTCGGGGTTCGTCATGTTTCTCTGTCATATTGAGCAAGTGATCTGTCTT
GTTTCTCTTAGACTGTAGAGTTGGCCATGACTCGATGGTGCTGGGGTTTT
TCTTAACGATGAAACCTTATGCAGACCCTGTATAATCCCTGTCTAGAAAT
GGTGTCTCTGCATGAAATTTCGAACATACGTGCAAAACGCCTCCGCAATG
TTGAAGTGCGTCGGAGACGCGAGGTACGTACGTGTTATAGTCGTACTCCT
CATGTTTGTTCTAGAATCTTCCCCCCTCCCTTTTCGCGGTTGTCTCGCTG
CGGGACTGCCAGGTTCCTCTATTGCTCCATTGCAGGTTAACGTACGTGTT
TGGTGCTATTGGTGCTATTGATGTTGACGTTGCGGACCTGGCTTTTTGCT
GTCGAAATGCTGTCGTCCTGCCATGTGTGTGCTTTGCCAGTGCTATGCAG
TTCAACCATACTACATGTTATTGTTCCCATTCGACTCGTGAGTTTTTTGT
TTTTGCCGTCGAATTTATATATATATATATACACCATACCTTCGACAGAG
GAATTTGTTTTCAATATACATCGTTAGGTTTACATTGATACTGCGTGACA
TATTTTGTCAGCGCACCATTTATTGCACTGGCAATACCAACTCTATATTG
GACGCACAGAGTCTGTTGTCCCCACCACTAGGGAGGGGGTATTGCTTGAT
CAATATACATTGGACATGGAAATGGTCGATTATATTATCCGGACAGTAAG
TATTGATACATACTCGACAGTTCATTTTGTCAAGCGAACATATGTTTGTA
ACACGATCGGGTGATCATATTATTGGGACAGAAAATATTTCAAAACTGCC
GAAAAGTCGTGTTGTTTGGACAATACATACACCGTTGGGCACTATAGGGT
ATTGTCCATATATAGTATTATACGCAATGTGTGGTATAACAGGGGTACTG
AACAATGTGCAGTTCAGTATATTATACACAGGAGTACTGGAGATAGCAAC
AAAAATGTGCTCTACAAGAGAACGGTTGGAGGTGTGCAAGTACTTTCCCT
TCAATAGATGACGTGTTTTGTCCGCGCGTTCCTGTTGGCGTTCACTATGC
TCTGTTGCAGGTCCGTTCGTATTGACCTTAATGGTTGGTTGGATCGGTGC
AACACATAGCCAACGACAAATTTAGTCCCCGCCAAATAGTCGGTACGCGG
GGGGTTCTTATACGGTAGATAATATGAAAATATATATATATATATATATA
TATATATATATATTTATATATTGATTTAAATATATACATGGGGCATCGTC
TAACTCGATTTTGTTTTGTGGCAAGTATGTACTGCACGTTTGTGATCGCG
AATCTATTGGGTGTAGCATGCATTGGAGCATATTGAAACTCGATTGGAGT
TCCTGAGGCATATATTGCTCACGCTTCGACGGGACGTCAATATGTATTGC
ACTGTTGTATTTATTCACAATGAGAACTTTTGAGGGTGATGTGTTGTCAA
TTCCAATATATATTGGGCGTTGAGGCGATCTGTGCATTGTACGAACATTG
CATACCATACTACATGCTTGTCCAGGGTGTATATGGAAGGGTGAATCAAT
CGCAGGACCTATTATCTCCCTATTGGGGATTGATCTGGTTTAGCTCAATT
TACCATTTTAGAGGGCTTTGCACAAGATACTATATTGTAGGCACAGTATC
TATTGCGTACCAATATACATATATATATATATATATATATATATATATTG
CTCGGCGCCACGGACATACTGGCGGTCCAATATATGCTGTGCGCAGTTAA
TACCAATATATTGCGCGTGCAAGATAGTGGATATGCTGCGTGTCCAATAT
AATTGCTCCAGCGCAAACATAAGATATTGTATGGGCAATATTTACTGCAT
GCTGCTCAGCGCGGCAAATTACCGAGCCACTATCATACTGTGTACTGTCG
AATATCGCATATTGCCCGAGCATTACATGTTGCAGTGTGCCATGTAGTAG
GTGTTACTCATCCAATATACTGTATATTGCACACCTCGTCCGTCAAGACA
TTGTGAACAGCAACGTATATTGTTCTGTCTAGGGTGTGACACACACACAC
ACACACAAATAAATGCACGTGTTTTTGTGTCTTAGCGGACGAACGTTTAT
ATTTTACCGAGATGTTGATACAATTTCTAACACGTAGTAACTTGAAATGT
TCCTTCGTTGAAATTATCGTGCACTACACAAGAATCTCCGGCGTGTGATG
AATACATCCGGCTATTTCAAACCCCCATACTGCCTACCTGATTCAGCCGA
ACCGGGGTGGCGTCTACCCCGCAGAGGAACAAATAACTCTGTTCTGTTGA
AGAAAATGTAGAAATACTTCGGTATGGGAGCATCGGATAAAGGGTTTTGC
GTTAGCCTTCCGGGGGTTAAAACCCCCCCCCCCGGCTATTTCAACATTTT
TGAATATTGGTAAAGAGCTCTTTGGGGGCACAGTACGCTACAGTACAGGG
ATACTTGAAGTATACACTCCTGCCCGACCTTGGGTGGTCCGGATGACCTT
CCATTCAGTCCATAATTACCTACATCTGCATCGACAGTGGCAAAGGTGGG
CACTGTAAGGTATATATCCATGCTAGAACGATAGCATGAAAGGGTTTACT
GTGGAAAGTTGTTGTTCAATCTCTTGGCTGAATGGCCATGCTTGGTCGGC
CCTTTTTATGCCTCTCTCTTTCCGCTTCGCTAACGCGAAAGCCTGTATTC
ATTTATTCCTTGGTTCGTTATCCCGAGATTGAAGGAATGGTAGAGTGGTT
GATGTGCACGAGAGATCTCGTAATCACCCGTCCGTCGATATCTGTCTGTC
TGTCTGTCTGTTTGTCTGTCATCTTTGCTCTTCACACGGCTTCTAATTTG
TAAAAAATAAAATGCTCTCGGTGCCAGGTTTCCGAGGTGCCGACGTTGCC
GGATGGATCTATCGACTACAGCGAGGACTTCTTCGGCAAGCCCGCCTTTT
TGACCGTGTCTGGCCAGGTATGCGCGGGATTATGGCGGGGGAGTGAAAGG
AGCAGTTTCTGTTTTTGTACACAGGTGGCAATTGGTCTTTTGGTTACAGG
GGATATTCACGATGTAACATCGGATCGTCTGGTCGAGGGGCGGGGCGGGG
CGGGGCGGCAGGAGATCATTTAGTCGGTAGTCACGGCTATTTATAGTCAT
GTCGGTAATTTTCAAAATTTCGGAAGGGGATCTTGGGTGACCCTAGAGGA
CAGTGCAGTACAGTATAGTACATCGATGGCGGCATTGTGTTACATTTGAT
CTACCGTGTTTTCTTTCTGGTTTTTTTTTTCTGGTTTTTTTTTTCTAGTT
TTTTTTCTTCTAGTTTTTTTTTTCTGGTTTTTTTTTTCTGGTTTTTTTCA
ACTTGACGTGTACTCATTAATGTAGTGTTGATTTCTTTCCTTTTCTATTT
CGATGGAGACTCTTTTGTGTCCGTGTACTCGTAGTAGCTCTACATCTTCG
GTACGTTTTTGTTTTCTATCTGCGACCCTTCTCCCCCGTCGACCCCGCTT
CTACCGGCACATGGAAATGTGTTGTATAGTGTGACACGACTCTTGAGTAT
CTTCATGTATTTTCATATATTGTTATACTCCATATATGGAGTACGTGTTT
GCCCAATCTATACTTTTCTCTCTTGTATACACAACTCCTTGTGTCGGTTG
ACCGCAGCTGTCGGCGGAGACGTACGCCTGCGCCTTGGGTGACGTGTACA
CCTTCGGCCCCACGTTCCGAGCGGAGAACAGTCAAACGACGAGGCACCTG
GCGGAGTTCTGGATGATCGAGCCTGAAATGGCCTTCGCTGACCTTACAGA
CGACATGGACAATGCGGTCAGTAATTTTAACTATTGCGAACCCTGCATTA
CAATGTACAGTCTACAGTCATGATCTAGAAACAGCTTGCCATGGCCACCG
AACGTCATCTCGAGCAAGTTATTATTACAAGTGCAACATGTGGTGGATAG
ATCGAGTAATTTTTGTATAAATCAAGTGATTTGATTGTCCTCCCTTCGAG
CATTCCATGTACGATCGGCTAGTTTATGCGCGGATTGTAGACTGGGGAAT
GTGTCATACTCTAATTAGTACATACTAGTTTACCCAAGGAGCTTGTCTCG
CGTCCGGATATTGCGGCGGGGATCTGGGACATGATCGGCCTCTTGATAGA
CGTTCTGAAGATTCTGTGCGCCGTGCAGCCCAGTACAATCGAAGGAAGTT
TCGTAGCCAGCTGCTATAGCTCTCTCTCTCTCACCGTGAAAACTCGCAAA
AAAGTTGAAAGCCTACAAGTGTTGATTTATTTTACCTGCTGTATGTGTGT
TGTGGGTTTCGTTGCTTCTGTGGACCCTGGCTTGTTGTTGACGTGCGACA
CAGGAAGCTTTCGTAAAGCATGTGGTATCGCACGTGATGGACGTCTGTGG
CCCAGACTTGAACTTCTTCAACCAATTTTACGATAAATCTTTGCTGGAGA
GGTTGCAAAGGATTAAGGACAAGCCGTTCGTCAGGGTGAGCCAACCAACT
GGAAGGGTTGCTGGGGGAAGAACTGTTTTTCCTAGGCTTGTTTTACCACC
ATATGATGAAAATATTCATGGTTGAGTTAACCTTGAGTTGTTTGTCGAAA
TCGCGGGCGGGCAAAGCTGAGAGGACTACTTTAGTTAAATCCGGCCCCGC
CAGCGTTTGTAATCGCCCAAATACTTCGCCGCTGCGCGGCATGGCGAAGA
CCCTTGAGCCAAGTTGGTGGAGGAGTCGAGCAGTAGTACACCATAGAAAA
ATCAAGTTCTTGTTTGATAGACCTTCGTAGACACCGCCGATTTCTTTTTT
CAATTTTCAGGGATGACACTACACTCGTTCTCTGATACTTTGGTCATTTC
TTGTTGTGGATGTCGGTTGTACTAAAGGCTCCATGCATCGGACCGATCAC
TATCGGTGTTTGCAGGCTTGCACGGATCGGACGTGGGAAAAGCTTTTGCT
ACAATAATCGACTTGGTACCGATGAAAGATGGTGGAAGCCATGTACGAAT
CAAAACGGTGTAGCGATAGTGCGATCTATCGGTGCTGAATGACCGGTACG
AGGTTCGCACGATCTGAACGGCCCTAACGGTGAAACGTACGTATGCCAGG
CCTATGAGTTGCTCCGATCAGCAAACATGGTGTTAAAACTACGGTGGTTA
GGGCGGCCATGGCGCTCACAGTCTACTGTTATACTACTACTGCAGTATTT
CCCTTGTCTTCGACTGGCCACATTTGTTTCACTCGGGGTGTTTATGTTGT
GCCGGGTAAGCATTGTTTTGTTTTAGGAACGTTTTTTTTTTTTTTTTTTT
TCGGTAACCTGTCCCCGGTTCGGTGCGGGGGCGATATCCGTTTGCCTCCA
ATGAAGGTTCGTATCATCGACGCGTGTTAGTGCCAGAAGGGAGGTGCGAT
CGATTCTAAAAATGGTACGATACTTTTGTGGTGAGCACGGAAGTGTGGCA
ACATCAGTTAGTCGATTGGTATTTTTGTATTTTTGTTTGTCGTTCAAGCC
TGTATGATGTCGGAGTCTTGTGGCCTTTTTTTTGGTATTGTACTTTGTAG
TTATTTTTTTTCGCTGTGAGTTACGCTTTTGCACCATGTTTCATCTATGA
CGGTGATACTTGATGGTAATTCCTAGTTTTCATGGCATCTTTTGTAAAAT
TGCACCTTGTGTTTATATTCGTTCTATTATACTCCGTTTTTTTTCATGAT
ACCTACACATTTATATAAACATAGGCACCGTAGGAAAGGTTGGTACCCGA
TACTGGTATTTTGGACATTTGATATCTTACCTGTACTAGTCCATCCCGGT
ATTTTCAAATGTCATACCTATGGTACTCACGCATACCACGGTATGTTGGC
AGTTCAATATCTACCTCACCGGCACTTTCCGATATTTTCGAATGTCGTAC
CAACTACGGTATCAAATACCGGCGTAAATACCCAGGGTATACTGGATGCT
ATACCTTACCTACGGTGCCTGTGCATTTATATATATATATTGCTGTTTCA
AATTTATTTGCAGGTTCGGTACTCGGATGCGGTAGCGGCGTTGCAGGAGG
AGATCGCTAAAGACCGTTCCAAATGGGCCTTTCCCGATGTGACCTTCGGA
ACAGACCTACAGGTGGGGTCTTTTGGAAGCTGCAAAATTGAAGGCTGCCG
TTCTAGCTCACTAGGTTGGTACCGTCGCAGGTTGTATGGCAAAGTACCTT
CGTACTAGTTGATTTGGCTGGTCTGGTTCCATGGTTTGATTGAGTTCTTG
TTGAGTAAGCTTATATGTATCTGTGTATCTCTGGATCTAATTAAATACGT
ATCTCTGGATGTAATTAAACATTAGCTGCGGGAAAGACAAGTGCCCTACG
TTGAAATATGCGTTCCTTGCATATTGGTGTTTAAGCGTTTATGCTGTTGA
GAGTGGTGTTGACGGCCGGTACGACATTTGGAGTGTGCGCTGTGTTCCGA
ACACTGCATGTGTTGCTTGAGCGCCAGCATTGTCAATGTCACCCCCTATG
ATTCTAGTTCGGCATGTTGACTTTTCCCGTGCTGATATTCTCCATGTACG
GTACACATGTGGTGAGGGCAACAATAATTGAACGTTCTGTGGCAGTTTTT
TTTTCTTCCTGTATTTATTATTATTATTTTTTAAGTATTATTATTTTTAA
AAAAATATTATTATTATTTTTTAATATTATTATTATTTTTTAATATTATT
ATTCTTTTTTTAATATTATTATTCTTTTTAAAATATTATTATTATTTTTT
TTATATTATTATTCTTTTTTTTCCGCGGTGTGTTGACGGCGTGCAGACGG
AGCACGAGCGGTGGCTCGCGGAGACACGTTACGACACAGCAGTGTTCGTT
TACGACTACCCCAGAGATATCAAGGCGTTTTACATGCGGGATAATGAAGA
CGGGAAGACGGTGGCCGCCATGGATCTGCTCGTGCCCGGCGTTGGTGAGT
GAGCGATGATGTGCTGGTCTCCGTGCTAAAACTATTTTCCGGGTACATGA
CGTGTTTTTTTTTTTTGCCGCACTGTTCTCTTTTTTTCTTTTTTTTTTCA
CCGCACGTGGCACTACGCAAGGTAAGGTATGTCAGTGCCCGTGTGGTTGG
TTCCAAGGGTGTTTTTTTTTCCCCCGAAGAACGAGACAGTAGCAGCAAAT
TGCAAACCCCAACAATACCTTACTTACCTGGATTTGTTCTCGTCGGGGTG
TGCAGTAGATTCACACGCCGATTGGTTTGTTGGAGAGCTGTCGTCAAGAC
GAGGAGCACGCATACTCGTTCTGTCTCAGGTGGGATTTGCTGAAATATTG
ATTTGACGCACAGATGTCGCACCGTGCGTGCTCTCTGTACAGACACTTGA
AGGAAAAGGTGGACCGTGGAGGGCAGCGGATCTCGCACACTTGTACACAA
GGCAAATCTCAATTTTATACCAATATGACCCCGAATTCTATCACAGTGGG
TGCCATCGAAAGCCGGCACTCATATGCGCATACGGAAATAACCGATGGTG
TCCTCCGGGGAGACGCGGGGAAGGCGTTTCGTCGGACCTTATTCGGTCCT
ACCCGCGTCATGTGCAGGCAGGCTTCTCCGCGGCAGTCGTCCGCACGCTG
AGCCTGTCATGACATCGTCGTGCGTAGCAGCAGCTTTGTCGCCGCCGCTC
GCGATGCTATTAGTTTATCGTACTGTGAGCTTCGGCTACTGCGGCTGGGA
CTGGTGCTTAATCCTGTGCCGGTATGTTTTTTGTGGCTTTACAGTAGCTT
GTCGCTCATTTTTTTCTTGCGTTTTTGCCATGTCTCTTAAATAATTTCTG
CGCTTTCCATTAGGTGAGCTAATTGGGGGGAGCCAACGCGAGGAGCGCTT
GGAACAGCTGGAAGCGAAGATGGTTGAGTTCGAGCTGGAGCCTAAGGACT
ACTGGTGGTACAACGATCTACGCAGGTAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9359:698..9576+

>mRNA_H-paniculata_contig9359.17134.1 ID=mRNA_H-paniculata_contig9359.17134.1|Name=mRNA_H-paniculata_contig9359.17134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig9359:698..9576+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGGAGAGTGTCCGGGAGATTATCCACTCCAGAAGAAGCGCCACAC
GTTAGAGTTTCTCAGGGGGATCGCGCACCTTCGGCCGCGGACGAATACTA
TCGCCGCCGTAGCTAGGGTTCGGTCTGCTCTCGCACAGATGGTCGGAGAG
TGTCCGGGAGATTATCCACTCCAGAAGAAGCGCCACACGTTAGAGTTTCT
CAGGGGGATCGCGCACCTTCGGCCGCGGACGAATACTATCGCCGCCGTAG
CTAGGGTTCGGTCTGCTCTCGCACAGGCTACACATGACTTCTTCCGAGAG
GAGGGCTTCTTGTACCTGCAGGCTCCTCTCATCACGGCCTCCGATTGCGA
GGGCGCCGGGGAGATGTTCCGCGTGACTACTCTGCCGTCACAGGCTACAC
ATGACTTCTTCCGAGAGGAGGGCTTCTTGTACCTGCAGGCTCCTCTCATC
ACGGCCTCCGATTGCGAGGGCGCCGGGGAGATGTTCCGCGTGACTACTCT
GCCGTCACAGGTTTCCGAGGTGCCGACGTTGCCGGATGGATCTATCGACT
ACAGCGAGGACTTCTTCGGCAAGCCCGCCTTTTTGACCGTGTCTGGCCAG
GTTTCCGAGGTGCCGACGTTGCCGGATGGATCTATCGACTACAGCGAGGA
CTTCTTCGGCAAGCCCGCCTTTTTGACCGTGTCTGGCCAGCTGTCGGCGG
AGACGTACGCCTGCGCCTTGGGTGACGTGTACACCTTCGGCCCCACGTTC
CGAGCGGAGAACAGTCAAACGACGAGGCACCTGGCGGAGTTCTGGATGAT
CGAGCCTGAAATGGCCTTCGCTGACCTTACAGACGACATGGACAATGCGC
TGTCGGCGGAGACGTACGCCTGCGCCTTGGGTGACGTGTACACCTTCGGC
CCCACGTTCCGAGCGGAGAACAGTCAAACGACGAGGCACCTGGCGGAGTT
CTGGATGATCGAGCCTGAAATGGCCTTCGCTGACCTTACAGACGACATGG
ACAATGCGGAAGCTTTCGTAAAGCATGTGGTATCGCACGTGATGGACGTC
TGTGGCCCAGACTTGAACTTCTTCAACCAATTTTACGATAAATCTTTGCT
GGAGAGGTTGCAAAGGATTAAGGACAAGCCGTTCGTCAGGGAAGCTTTCG
TAAAGCATGTGGTATCGCACGTGATGGACGTCTGTGGCCCAGACTTGAAC
TTCTTCAACCAATTTTACGATAAATCTTTGCTGGAGAGGTTGCAAAGGAT
TAAGGACAAGCCGTTCGTCAGGACGGAGCACGAGCGGTGGCTCGCGGAGA
CACGTTACGACACAGCAGTGTTCGTTTACGACTACCCCAGAGATATCAAG
GCGTTTTACATGCGGGATAATGAAGACGGGAAGACGGTGGCCGCCATGGA
TCTGCTCGTGCCCGGCGTTGACGGAGCACGAGCGGTGGCTCGCGGAGACA
CGTTACGACACAGCAGTGTTCGTTTACGACTACCCCAGAGATATCAAGGC
GTTTTACATGCGGGATAATGAAGACGGGAAGACGGTGGCCGCCATGGATC
TGCTCGTGCCCGGCGTTGGTGAGCTAATTGGGGGGAGCCAACGCGAGGAG
CGCTTGGAACAGCTGGAAGCGAAGATGGTTGAGTTCGAGCTGGAGCCTAA
GGACTACTGGTGGTACAACGATCTACGCAGGTACGTGAGCTAATTGGGGG
GAGCCAACGCGAGGAGCGCTTGGAACAGCTGGAAGCGAAGATGGTTGAGT
TCGAGCTGGAGCCTAAGGACTACTGGTGGTACAACGATCTACGCAGGTAC
back to top