prot_H-paniculata_contig933.17111.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig933.17111.1
Unique Nameprot_H-paniculata_contig933.17111.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JTL4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL4_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 4.970e-37
Identity = 64/138 (46.38%), Postives = 94/138 (68.12%), Query Frame = 0
Query:    5 AAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            AAA FG+SK+SL R + G+    +R G  TVLT EEE A+ED+L+Y  R+ + +  ++ K  VR   +DGRP+PW P+K P + W  GF+ RH R+SLR +RIYEANR+T+ + D+L + Y  W+++ +E KPA  H+
Sbjct:   28 AAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYACRNYIPLTRNDLKERVRQLCNDGRPIPWDPDKGPGKSWLQGFLRRHDRISLRLARIYEANRMTSPEDDRLHNFYKFWQEFVNEHKPAPDHV 165          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.490e-34
Identity = 65/138 (47.10%), Postives = 94/138 (68.12%), Query Frame = 0
Query:    5 AAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            AAA +GISK+SL+R + G+    +R G  TV+TA EE A+ED+L+Y GR+ + + + +    VR   +DGRP+PW P+K P R W  GF+ RH R+SLR +RIYE+NRVT+ + ++L   Y  W Q+ DE +PAA H+
Sbjct:   42 AAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHV 179          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JDZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ5_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 4.780e-34
Identity = 62/138 (44.93%), Postives = 91/138 (65.94%), Query Frame = 0
Query:    5 AAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            AAA FG+SK+SL R + G+    +R G  TVLT EEE A+ED+L+Y GR+ + +  ++ K  VR   +D RP+PW P+K   + W  GF+  H R+SLR +RIYEANR+T+ + D+L   Y  W+++ +E KPA  H+
Sbjct:   28 AAAAFGLSKTSLLRRLSGECDMDARVGHGTVLTKEEENALEDVLLYAGRNYIPLTRNDLKERVRQLCNDDRPIPWDPDKGLGKSWLQGFLRGHDRISLRLARIYEANRMTSPEDDRLHKFYKFWQEFVNEHKPAPDHV 165          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 7.660e-34
Identity = 59/142 (41.55%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            S+R AA  FG+ ++S+    +GKV   ++ G  T+L+ EEE ++ED+L++  R+ L +G    +  VR   +DGR +PW PEK P ++W  GF  RHPR++ RS+RIYEANR+T D++ ++   Y  W    DE KP A H+
Sbjct:   23 SVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHV 164          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.280e-32
Identity = 63/138 (45.65%), Postives = 90/138 (65.22%), Query Frame = 0
Query:    5 AAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            AAA +G+SK SL+R + G+    +R G  TV+TA EE A+ED+L+Y GR+ + +   +    VR   +DGRP+PW P+K P R W  GF+ RH R+SLR +RIYE+NRVT    ++L   +  W Q+ DE +PAA H+
Sbjct:  385 AAAAYGVSKMSLSRRLSGECAMDARVGPGTVMTAAEEDALEDVLLYAGRNYIPLTPADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTCVGDERLHKFFDFWGQFLDEHQPAADHV 522          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5K4M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M5_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.150e-32
Identity = 59/142 (41.55%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            S+R AA  FG+ ++S+    +GKV   ++ G  T+L+ EEE ++ED+L++  R+ L +G    +  VR   +DGR +PW PEK P ++W  GF  RHPR++ RS+RIYEANR+T D++ ++   Y  W    DE KP A H+
Sbjct:    2 SVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHV 143          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5L513_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L513_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.620e-31
Identity = 52/115 (45.22%), Postives = 74/115 (64.35%), Query Frame = 0
Query:   28 SRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            +R G  T L+ EEE ++ED+L+Y GRHCL +G       V    +DGRP+PW P + P ++W  GF+ RHPR+S R++RIYEANR+T D + ++ + Y  W    DE KP A H+
Sbjct:    3 ARVGPATFLSEEEEKSLEDVLLYAGRHCLAVGRLHLLETVIQLCNDGRPIPWDPGQGPGKDWLAGFLKRHPRVSERTTRIYEANRITEDKEPRIVEFYKKWAALLDEHKPEADHV 117          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.500e-31
Identity = 59/142 (41.55%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI 142
            S+R AA  FG+ ++S+    +GKV   ++ G  T+L+ EEE ++ED+L++  R+ L +G    +  VR   +DGR +PW PEK P ++W  GF  RHPR++ RS+RIYEANR+T D++ ++   Y  W    DE KP A H+
Sbjct:   23 SVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHV 164          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.750e-31
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    1 SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQK 136
            S+R AA  +G+  +SL   V+ KV   +R G  TVL+ EEE  +ED+LIY  RH L +G  E +  VRN  +DGR VPW P+K P   W  GFM RHP LS R++ IYEANR+  D + +L+  Y  W +Y +E K
Sbjct:   38 SLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETK 173          
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 4.520e-31
Identity = 63/136 (46.32%), Postives = 84/136 (61.76%), Query Frame = 0
Query:    1 SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIYTGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRLSLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQK 136
            S+R AA  +G+  +SL   V+ KV   +R G  TVL+ EEE  +ED+LIY  RH L +G  E +  VRN  +DGR VPW P+K P   W  GFM RHP LS R++ IYEANR+  D + +L+  Y  W +Y +E K
Sbjct:   53 SLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig933.17111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTL4_9PHAE4.970e-3746.38HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JYX7_9PHAE1.490e-3447.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDZ5_9PHAE4.780e-3444.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRY4_9PHAE7.660e-3441.55HTH psq-type domain-containing protein n=4 Tax=Ect... [more]
A0A6H5K6W6_9PHAE2.280e-3245.65HTH psq-type domain-containing protein n=1 Tax=Ect... [more]
A0A6H5K4M5_9PHAE4.150e-3241.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L513_9PHAE1.620e-3145.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFM5_9PHAE2.500e-3141.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMR3_9PHAE2.750e-3146.32HTH psq-type domain-containing protein (Fragment) ... [more]
A0A6H5LAK0_9PHAE4.520e-3146.32HTH psq-type domain-containing protein (Fragment) ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007889DNA binding HTH domain, Psq-typePFAMPF05225HTH_psqcoord: 1..26
e-value: 1.5E-4
score: 21.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig933contigH-paniculata_contig933:28280..28708 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig933.17111.1mRNA_H-paniculata_contig933.17111.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig933 28280..28708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig933.17111.1 ID=prot_H-paniculata_contig933.17111.1|Name=mRNA_H-paniculata_contig933.17111.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
SIRSAAAKFGISKSSLARFVQGKVTTTSRPGQTTVLTAEEELAIEDLLIY
TGRHCLGIGSDEPKRGVRNTFSDGRPVPWGPEKRPCREWFVGFMCRHPRL
SLRSSRIYEANRVTADDQDQLEDLYGCWKQYCDEQKPAAGHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007889HTH_Psq