mRNA_H-paniculata_contig9301.17084.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9301.17084.1
Unique NamemRNA_H-paniculata_contig9301.17084.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.750e-42
Identity = 110/289 (38.06%), Postives = 142/289 (49.13%), Query Frame = 1
Query:    1 QSLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSMGDPAPTPAPAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867
            +SLGCYAD +N  R L     +CG+GE AMSPAICA+YC T+ G T F V++S+QC CG S  DYD+ GSLS D C++LC A PD  CGG   +EV+++GDP PT APA     +                                     PST+  AP                      S+ P  P P       +G   Y GCF DS +DR+ S   V     MTTA+CA  C    ++GT++  EC+CG+  D        +C M C GDSS+ CGG NA+S Y
Sbjct:  432 ESLGCYADDVND-RALPIQGPNCGEGETAMSPAICASYCETL-GSTFFGVQFSFQCFCGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVFTIGDPTPTEAPAPTPLVN-------------------------------------PSTQ--APXXXXXXXX------XXXXXXXXSTAPTTPAPVN-----AGAAGYLGCFGDSQTDRVFS--VVVFSGSMTTAICASTCADYAYYGTQFGGECWCGNNADYDVYGEA-TCDMGCTGDSSDICGGFNAMSFY 665          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.320e-40
Identity = 100/208 (48.08%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  250 PDETCGGKEAMEVYSMGDPAPTPAPAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSG-SAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867
            PD    G   M V S+                M+TA CA+FC G  YFG Q+  ECFC ++ D   E G S  C   CSGD +E CGGS A+ VYE+S          XXX       YE  GCFVD +SDR+LSG S +  +S MT A CA  CEGST+FGTEY+ ECFC S GD P +    S C M C+GDSSETCGG NAI VY
Sbjct:  187 PDRVLSGDSMMSVNSV----------------MTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYS--DXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVY 376          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A1Y2LJZ5_EPING (Uncharacterized protein n=1 Tax=Epicoccum nigrum TaxID=105696 RepID=A0A1Y2LJZ5_EPING)

HSP 1 Score: 154 bits (390), Expect = 1.130e-38
Identity = 113/326 (34.66%), Postives = 159/326 (48.77%), Query Frame = 1
Query:    4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSL--SQDKCKHLCTAFPD--ETCGGKEAMEVYSMGDPAPTPAPAMIGQA---------------------DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPV----------PTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICE--GSTFFGTEYSEECFCGSPGDDPTDASL-GSCTMACAGDSSETCGGSNAISVY 867
            +LGCY D  N KR L    T      + MS   CA +CS  S   LF +EY  +C+CG S ++    GS+  S++ C   C   P+  E CG  + +  YS  +     + AM G                       DM+ A CA+ C+GY YFGTQY  EC+CG  +   S    +++C   C+G+  E CGG   ++VY+    S              PTP   +   +G Y Y GC+ D+   R+LSG    AD+ MT   CA  C   G ++FG EYS EC+CG+  D  +  S  G+C   C+GD+S+ CGG+N +SVY
Sbjct:  102 ALGCYTDNANGKRAL----TGKSMAADDMSVQKCATFCSQFS---LFGLEYGRECYCGNSRDE----GSVKASENDCSFSCAGNPNGAEKCGAGDRLNFYSNQNVITVKSAAMPGVTSLGCFVDNGNRVLPMGFANAQDMTAAKCAQNCAGYSYFGTQYSSECYCGHTAPKTSAL--ASECNMACAGNGDELCGGGMRLNVYQVDPPSAATAVSXXXXXXXXPTPTTPSIVVAG-YRYQGCYTDNVPQRVLSGKNT-ADAAMTLEKCAAFCSKSGYSWFGVEYSSECYCGTSLDPLSVPSREGACNAQCSGDASQKCGGANLLSVY 412          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI001874BD84 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001874BD84)

HSP 1 Score: 153 bits (386), Expect = 3.560e-38
Identity = 104/315 (33.02%), Postives = 163/315 (51.75%), Query Frame = 1
Query:    4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDET--CGGKEAMEVY-SMGDPAPTPAPA--------------------MIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSS-TPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGS--TFFGTEYSEECFCGSPGDDP-TDASLGSCTMACAGDSSETCGGSNAISVY 867
            +LGC+ D +N +RVL    T+     N ++   CAA CS       F VE+  +C+CG S +    + + +   C   C   P     CG  + + +Y +    AP PA                       +  +DM+ A CA  C+GYKYFGTQ+  EC+CG  +   +   P+++C   C+G+ +E CGGS  ++VYE   SS   P+  P   + +    ++Y GC+ D+   R+LSG  +K D  MT  +CA  C+ S  ++FG E+S EC+CG   D   T  +   C+MAC+G+SS++CGG+N +S++
Sbjct:   37 ALGCFTDNVNGRRVLGDKNTAA----NDITLEKCAASCSQYK---YFGVEFGRECYCGNSRDSGSTEANAAD--CWFPCAGDPTGVAKCGAADRINIYVNTNSNAPAPASLDGITSLGCFAEGTQRVLPEKTVAASDMTAAKCATNCAGYKYFGTQWSSECYCGNTAPAITV--PTSECNMVCAGNSSELCGGSLRLNVYELPQSSQASPLSVPVIPSVS---GFDYKGCYTDNVPYRVLSGKVIK-DPAMTLEMCAAACKNSGYSWFGVEFSTECYCGMALDKASTSTAAAECSMACSGNSSQSCGGANRLSLF 336          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI001873F7A4 (uncharacterized protein n=1 Tax=Colletotrichum truncatum TaxID=5467 RepID=UPI001873F7A4)

HSP 1 Score: 150 bits (379), Expect = 2.620e-37
Identity = 107/316 (33.86%), Postives = 159/316 (50.32%), Query Frame = 1
Query:    7 LGCYADFINKKRVLS--HAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPD--ETCGGKEAMEVYSMGD-----PAPTPAPA----------------MIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEF-SGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICE--GSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867
            LGC+ D  N +R ++  +AAT      N M+   CAA+CS  +    F +EY  +C+CG S +    +   +   C   C   P   + CG    + +YS  +     PA  P  A                +IG  DM+ A CA  C GY YFGTQ+  EC+CG  + + S   P+++C   CSG   E CGGS  ++VY+  S ++  P  +       P   +EY GC+ D    R+L+G  V  D  MT  +CA  C+  G T+FG EY+ EC+CG+  D  +    G+ C+M+C G++S+ CG +N ISV+
Sbjct:   37 LGCFTDLANGQRAINDKNAAT------NDMTVESCAAFCSNYA---FFGLEYGRECYCGNSRDSGSTEADAND--CSFSCAGDPSGVQRCGAGNRLNLYSNSNYAAAAPASLPDIASLGCFVDSAQRVLPDKIIGANDMTAAKCAANCVGYSYFGTQWSSECYCG--NTVPSVSAPASECNMLCSGKGDEVCGGSLRLNVYKLPSTANNQPSTSATEPAIPPVSGFEYKGCYSDGIPQRVLAGKVVN-DPSMTIEMCAEACKNWGYTWFGVEYTTECYCGTALDGASTKVAGTECSMSCGGNNSQKCGAANRISVF 338          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A1Y2FN79_PROLT (WSC domain-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FN79_PROLT)

HSP 1 Score: 144 bits (362), Expect = 2.550e-36
Identity = 113/309 (36.57%), Postives = 144/309 (46.60%), Query Frame = 1
Query:    4 SLGCYADFINKKRVLSHAATSCGKGENAMSPAI-----CAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSMGDPAPTPA-----------PAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPST--KCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDS-TSDRILSGSAVKADSGMTTAVCAGIC--EGSTFFGTEYSEECFCGSPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867
            ++GCY+D   K RVLS        G++   P       CA +C+   G  +   EY  +C+CG S         L    C   C+A PDE CGG  A+ + S+                    A     DMS   CA  C G+  +G +Y +EC+CG    L    GP+    C   CSG   E CGGSNA+SVY       P V +          +    GCF D     R+L G+   +D  MT AVC+  C     T FGTE+  ECFCG+    PT +S G CT +CAGDSSE CGGSNAISVY
Sbjct:   51 NVGCYSDDYPKSRVLS--------GKSYSEPTYNTLYRCAEFCAD-HGFAVSGAEYGQECYCGNSLPPTQ----LDSSACDFPCSAKPDEICGGNNALSIQSITFVQSLGCYEDQINYRSLNGASFSAPDMSIEKCAGLCQGFTNYGVEYSNECYCGNGLRL----GPTAAANCNMACSGSPNEICGGSNALSVY-----GAPVVASDV-------NNVTSIGCFTDFYPQSRVLDGANTASDE-MTEAVCSAFCAQRAFTLFGTEFGRECFCGNTL--PTVSSSG-CTQSCAGDSSEICGGSNAISVY 326          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A084FVF2_PSEDA (Beta-1, 3 exoglucanase n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084FVF2_PSEDA)

HSP 1 Score: 144 bits (364), Expect = 3.200e-35
Identity = 103/320 (32.19%), Postives = 144/320 (45.00%), Query Frame = 1
Query:    7 LGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSM---GDPAPTPAP-------------------------AMIGQA----DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTD-ASLGSCTMACAGDSSETCGGSNAISVY 867
            L C+ +  N  R L  A+ +     +AM+   C A+C+   G   +  EY  +C CG S +    +  LS+  C  +C+    + CG    +E+YS    G P  TP P                         A+  +A    DM+   CAEFC G            FCG      S   P + C  PC G+ T+ CG +N +++Y+      P  P+P        G Y + GC  +         SA  AD GMT  +CAG+CEG  FFGTEY+ ECFCG+   + ++ A +G C M CAGD  E CGG N +SVY
Sbjct:  749 LSCWTEGANNIRALKEASFA----SDAMTLESCMAFCA---GYVYWGTEYGRECFCGDSLDATSSEAPLSE--CDMVCSGDDSQYCGAGNRLELYSTTATGVPTATPTPDDHFPSPIGPYNLVGCWKEGANGVRALDAKATASPDMTLDKCAEFCDG------------FCGNTLHQTSSPAPISNCNTPCPGNATQHCGAANRLTLYQLPDYQEPHHPSPI-------GPYTFAGCRTELGPGARALSSAAFADDGMTNGMCAGLCEGYAFFGTEYARECFCGNELAEGSEVADVGDCAMVCAGDGGELCGGPNRLSVY 1040          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: UPI00144A7B17 (heme peroxidase n=1 Tax=Lindgomyces ingoldianus TaxID=673940 RepID=UPI00144A7B17)

HSP 1 Score: 143 bits (361), Expect = 7.790e-35
Identity = 103/319 (32.29%), Postives = 152/319 (47.65%), Query Frame = 1
Query:    7 LGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDK--CKHLCTAFPDETCGGKEAMEVY------SMGDPAPTPAPAMIGQ----------------------ADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSG-DVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTDASLGS-CTMACAGDSSETCGGSNAISVY 867
            +GCY++  +  R LS + T+     NAM+   CA +C+   G T F VEY  +C+CG         GS++Q    C   C     E CG    + +Y      S   P P+  P + G                       ++ + ATCA+FCSGY YFG +Y  EC+C           P + C   CSG + T  CG +N ++V++ +  +TPP   P          Y YTGC  DS ++R+L+G     D+ MT  +C   C+G+ +FGTEY  EC+CG    +PT     S C+  C G+  E CGG+N +S++
Sbjct:  647 IGCYSEG-STGRALSDSQTA----NNAMTVEACANFCN---GATYFGVEYGQECYCG----GVLNAGSVNQSATDCSMTCAGNSTEYCGAGNRLNIYKKIPVTSSLTPMPSTTPHLSGYTYLGCLSDSVTSRTLSIKSYSTSNNTYATCADFCSGYVYFGVEYSTECYCSDTLSNTPSTVPESDCNMACSGSEGTGNCGAANRLNVFKSTTITTPPA-NPVV------AGYNYTGCHTDSVNNRVLNG-VFLFDASMTVEMCVEFCKGTKYFGTEYGGECYCGEKFVNPTSVVQESNCSFVCGGNKKEYCGGANRLSLW 945          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: S3D7Y3_GLAL2 (Uncharacterized protein n=1 Tax=Glarea lozoyensis (strain ATCC 20868 / MF5171) TaxID=1116229 RepID=S3D7Y3_GLAL2)

HSP 1 Score: 143 bits (360), Expect = 8.160e-35
Identity = 107/325 (32.92%), Postives = 154/325 (47.38%), Query Frame = 1
Query:   10 GCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLS--QDKCKHLCTAFPDETCGGKEAMEVY--------SMGDPAPTPAP--------------AMIGQA---------DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEY-----TGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCG-SPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY 867
            GCY +  +  R LS A+ +     + ++   CA +CS+     +F VEY  +C+CG +       GS+      C   C+    +TCG    + VY        +   P  T +P              A  G+A          M+T  CA  C+G+KYFG +YY EC+CG +    S    ST C  PC+GD T+TCG +N +++Y F  SS+ P P  XXX         Y     TGC+ ++T+ R LSG A   ++GMT  +CA  C G   FG EY  EC+CG S       A    C+  C G+++E CG  N ++VY
Sbjct:  425 GCYTEATSA-RALSAASLA----SDQLTVDRCATFCSS---FPIFGVEYGRECYCGSALA----AGSVRAPDTDCNFKCSGSSTQTCGAGNRLNVYMKPSSTVTTSASPTSTTSPTLPTSYGTLGCYTEATNGRALKEKSFSDDAMTTQKCAANCAGFKYFGLEYYFECYCGNSLQPGSVQVASTDCKFPCTGDKTQTCGANNRLNLYAFGDSSSLPTPVSXXXXXXXXXXXXYPGYATTGCYTEATNMRALSG-ATYINNGMTVEICASACSGFAMFGVEYGRECYCGASLNSGSVSAPTSECSFVCPGNNNEFCGAGNRLNVY 736          
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Match: A0A6A5TCJ6_9PLEO (Heme peroxidase n=1 Tax=Byssothecium circinans TaxID=147558 RepID=A0A6A5TCJ6_9PLEO)

HSP 1 Score: 141 bits (355), Expect = 4.800e-34
Identity = 107/333 (32.13%), Postives = 155/333 (46.55%), Query Frame = 1
Query:   10 GCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAVEYSYQCHCGKSGEDYDQQGSLSQDK--CKHLCTAFPDETCGGKEAMEVYSM---------------------GDPAPTPA----------------PA---MIGQA----DMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSEYGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPXXXTSTPSGDYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEECFCGSPGDDPTD-ASLGSCTMACAGDSSETCGGSNAISVY 867
            GCY++     R LS +AT+     N ++   CAA+CS     T F VEY  +C+CG +       GS+      C  LC     + CG    + +Y                          A TP+                PA   MIG++    D + A CA FCSGY+YFG +Y  EC+C    + Y +  PS++C  PC+GD + +CGG + ++V++    S  PV  P   T     +Y Y GC+ DS + R+L+      DS MT   CA +C G T+FGT+Y  EC+CG+   +P+       C+  C GD  E CG  N +S+Y
Sbjct:  594 GCYSEGSGG-RALSDSATN----SNTLTVQSCAAFCSAT---TYFGVEYGRECYCGNTLN----AGSVPMPATDCNMLCGGSNAQYCGAGNRLNIYQKLPVSSSXXXXXXXXXXXXXXXXXXATTPSGPSVAGYTYVGCLSDSPANRTMIGKSRGTSDNTYAACASFCSGYQYFGAEYSAECYCSNLLE-YMDQKPSSECSMPCAGDSSTSCGGPSRLTVFK----SNTPVRLPRNPTI---ANYTYKGCYTDSVNARVLA-DGYTPDSAMTVEKCAAVCNGYTYFGTQYGGECYCGASLKNPSQKVDERDCSFLCGGDKLEYCGAGNRLSMY 905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9301.17084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G957_ECTSI1.750e-4238.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LC73_ECTSI1.320e-4048.08Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A1Y2LJZ5_EPING1.130e-3834.66Uncharacterized protein n=1 Tax=Epicoccum nigrum T... [more]
UPI001874BD843.560e-3833.02uncharacterized protein n=1 Tax=Colletotrichum tru... [more]
UPI001873F7A42.620e-3733.86uncharacterized protein n=1 Tax=Colletotrichum tru... [more]
A0A1Y2FN79_PROLT2.550e-3636.57WSC domain-domain-containing protein n=1 Tax=Proto... [more]
A0A084FVF2_PSEDA3.200e-3532.19Beta-1, 3 exoglucanase n=1 Tax=Pseudallescheria ap... [more]
UPI00144A7B177.790e-3532.29heme peroxidase n=1 Tax=Lindgomyces ingoldianus Ta... [more]
S3D7Y3_GLAL28.160e-3532.92Uncharacterized protein n=1 Tax=Glarea lozoyensis ... [more]
A0A6A5TCJ6_9PLEO4.800e-3432.13Heme peroxidase n=1 Tax=Byssothecium circinans Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9301contigH-paniculata_contig9301:5262..6712 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score216.5
Seed ortholog evalue1.7e-53
Seed eggNOG ortholog2880.D7G957
KEGG rclassRC00194
KEGG koko:K04618,ko:K08254,ko:K11244,ko:K20929
KEGG ReactionR01098
KEGG Pathwayko00052,ko04011,ko04139,map00052,map04011,map04139
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC1.1.3.9,1.2.3.15,3.2.1.59
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size867
Cds size867
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9301.17084.1prot_H-paniculata_contig9301.17084.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9301 5262..6712 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.636596-CDS-H-paniculata_contig9301:5261..53781622931157.636596-CDS-H-paniculata_contig9301:5261..5378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5262..5378 -
1691481616.3977926-CDS-H-paniculata_contig9301:5261..53781691481616.3977926-CDS-H-paniculata_contig9301:5261..5378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5262..5378 -
1622931157.652811-CDS-H-paniculata_contig9301:5603..56601622931157.652811-CDS-H-paniculata_contig9301:5603..5660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5604..5660 -
1691481616.4131453-CDS-H-paniculata_contig9301:5603..56601691481616.4131453-CDS-H-paniculata_contig9301:5603..5660Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5604..5660 -
1622931157.6766946-CDS-H-paniculata_contig9301:5815..61751622931157.6766946-CDS-H-paniculata_contig9301:5815..6175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5816..6175 -
1691481616.426287-CDS-H-paniculata_contig9301:5815..61751691481616.426287-CDS-H-paniculata_contig9301:5815..6175Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 5816..6175 -
1622931157.691995-CDS-H-paniculata_contig9301:6379..67121622931157.691995-CDS-H-paniculata_contig9301:6379..6712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 6380..6712 -
1691481616.4368901-CDS-H-paniculata_contig9301:6379..67121691481616.4368901-CDS-H-paniculata_contig9301:6379..6712Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9301 6380..6712 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9301.17084.1

>prot_H-paniculata_contig9301.17084.1 ID=prot_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
QSLGCYADFINKKRVLSHAATSCGKGENAMSPAICAAYCSTVSGMTLFAV
EYSYQCHCGKSGEDYDQQGSLSQDKCKHLCTAFPDETCGGKEAMEVYSMG
DPAPTPAPAMIGQADMSTATCAEFCSGYKYFGTQYYDECFCGAASDLYSE
YGPSTKCVAPCSGDVTETCGGSNAMSVYEFSGSSTPPVPTPTPPTSTPSG
DYEYTGCFVDSTSDRILSGSAVKADSGMTTAVCAGICEGSTFFGTEYSEE
CFCGSPGDDPTDASLGSCTMACAGDSSETCGGSNAISVY
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mRNA from alignment at H-paniculata_contig9301:5262..6712-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9301.17084.1 ID=mRNA_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1451bp|location=Sequence derived from alignment at H-paniculata_contig9301:5262..6712- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTCTCTAGGCTGCTACGCGGATTTCATTAACAAAAAACGTGTGTTGTC CCACGCTGCGACCTCCTGTGGCAAAGGCGAGAACGCCATGAGCCCTGCCA TCTGCGCCGCGTATTGCTCAACCGTCAGCGGAATGACCTTGTTTGCTGTA GAGTACTCTTACCAGTGCCACTGCGGCAAGTCCGGTGAGGACTACGACCA GCAAGGCTCCCTGTCCCAGGACAAGTGCAAACACCTCTGCACGGCCTTCC CCGACGAAACCTGTGGTGGGAAGGAAGCCATGGAAGTATATTCAATGGGC GACCCTGCACCGACCCCCGCCCCCGCGATGATCGTCGACCCCATCGACCC CGCTACGCCCACGCCTCCCACACCTACGCCCACGCCTCCCACACCTACGG TCACGCCTCCCACACCTACGCCCACGCCTCCCACACCTACGCCCACGCCT CCCACACCTACTCCTTCGGATGACTACGACTACCTGGGCTGCTATGGAGA CGGGGCAGCCCGCGTGTTCTCTGGGCTGTCTGTGAAGGGACAGGCCGACA TGTCTACGGCAACTTGTGCTGAGTTCTGCTCCGGATACAAATATTTCGGG ACCCAGTACTACGACGAGTGCTTTTGCGGTGCAGCCTCCGACCTCTACAG TGAGTACGGGCCGTCTACCAAGTGCGTGGCGCCTTGCAGTGGTGACGTGA CTGAGACCTGCGGTGGGTCGAATGCCATGAGTGTTTACGAGTTTAGCGGG TCCTCTACGCCTCCTGTGCCCACGCCCACACCCCCTACTTCCACACCCTC TGGAGATTACGAATACACCGGTTGCTTTGTGGATTCCACGTCTGATCGCA TACTATCGGGTTCTGCGGTCAAGGCTGACTCCGGCATGACCACAGCGGTG AGTTTAGTAGGGCCTATACGGGAAAGCCTTTTGCAGTCGTTTCAATCAAG TCAAGTAGATGTAATTTCAAGTGTACGTGACGCGTTAGAACTTTGGGAAT TTGGCTCAAATCATCTCCCCCTTACTGTGCGCAACTACTACATCTTCGAA AGGTTTGCGCTGGAATCTGTGAGGGATCCACATTCTTCGGCACAGAATAC TCGGAGGAGGTGAGGATCTCTCCGGGAATGTGTGTAAAATAATGGAGTCA ATAATACGGAAGCTGTGCCGTGCAATACGTACGTAGAGATGTTGTCGGAC TATCCTGTGTGCTGGAGTTTTGGACCACGCCATTCGTTTGATGCCTTCTG GAATTGTCCAGAATTTCTGTCTCTTAACATGGACATGAACACCACTTTCC TCTTGGTGATGAATTTTGCGTTATGGCGTTGCAGTGCTTCTGTGGTAGTC CCGGTGACGACCCTACGGACGCAAGCCTAGGTTCCTGTACCATGGCGTGC GCTGGCGACTCTTCTGAAACCTGCGGCGGAAGCAACGCGATAAGCGTGTA C
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Coding sequence (CDS) from alignment at H-paniculata_contig9301:5262..6712-

>mRNA_H-paniculata_contig9301.17084.1 ID=mRNA_H-paniculata_contig9301.17084.1|Name=mRNA_H-paniculata_contig9301.17084.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at H-paniculata_contig9301:5262..6712- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTCTCTAGGCTGCTACGCGGATTTCATTAACAAAAAACGTGTGTTGTC
CCACGCTGCGACCTCCTGTGGCAAAGGCGAGAACGCCATGAGCCCTGCCA
TCTGCGCCGCGTATTGCTCAACCGTCAGCGGAATGACCTTGTTTGCTGTA
GAGTACTCTTACCAGTGCCACTGCGGCAAGTCCGGTGAGGACTACGACCA
GCAAGGCTCCCTGTCCCAGGACAAGTGCAAACACCTCTGCACGGCCTTCC
CCGACGAAACCTGTGGTGGGAAGGAAGCCATGGAAGTATATTCAATGGGC
GACCCTGCACCGACCCCCGCCCCCGCGATGATCCAGTCTCTAGGCTGCTA
CGCGGATTTCATTAACAAAAAACGTGTGTTGTCCCACGCTGCGACCTCCT
GTGGCAAAGGCGAGAACGCCATGAGCCCTGCCATCTGCGCCGCGTATTGC
TCAACCGTCAGCGGAATGACCTTGTTTGCTGTAGAGTACTCTTACCAGTG
CCACTGCGGCAAGTCCGGTGAGGACTACGACCAGCAAGGCTCCCTGTCCC
AGGACAAGTGCAAACACCTCTGCACGGCCTTCCCCGACGAAACCTGTGGT
GGGAAGGAAGCCATGGAAGTATATTCAATGGGCGACCCTGCACCGACCCC
CGCCCCCGCGATGATCGGACAGGCCGACATGTCTACGGCAACTTGTGCTG
AGTTCTGCTCCGGATACAAATATTTCGGGACCCAGTACTACGACGAGTGC
TTTTGCGGTGCAGCCTCCGACCTCTACAGTGAGTACGGGCCGTCTACCAA
GTGCGTGGCGCCTTGCAGTGGTGACGTGACTGAGACCTGCGGTGGGTCGA
ATGCCATGAGTGTTTACGAGTTTAGCGGGTCCTCTACGCCTCCTGTGCCC
ACGCCCACACCCCCTACTTCCACACCCTCTGGAGATTACGAATACACCGG
TTGCTTTGTGGATTCCACGTCTGATCGCATACTATCGGGTTCTGCGGTCA
AGGCTGACTCCGGCATGACCACAGCGGGACAGGCCGACATGTCTACGGCA
ACTTGTGCTGAGTTCTGCTCCGGATACAAATATTTCGGGACCCAGTACTA
CGACGAGTGCTTTTGCGGTGCAGCCTCCGACCTCTACAGTGAGTACGGGC
CGTCTACCAAGTGCGTGGCGCCTTGCAGTGGTGACGTGACTGAGACCTGC
GGTGGGTCGAATGCCATGAGTGTTTACGAGTTTAGCGGGTCCTCTACGCC
TCCTGTGCCCACGCCCACACCCCCTACTTCCACACCCTCTGGAGATTACG
AATACACCGGTTGCTTTGTGGATTCCACGTCTGATCGCATACTATCGGGT
TCTGCGGTCAAGGCTGACTCCGGCATGACCACAGCGGTTTGCGCTGGAAT
CTGTGAGGGATCCACATTCTTCGGCACAGAATACTCGGAGGAGGTTTGCG
CTGGAATCTGTGAGGGATCCACATTCTTCGGCACAGAATACTCGGAGGAG
TGCTTCTGTGGTAGTCCCGGTGACGACCCTACGGACGCAAGCCTAGGTTC
CTGTACCATGGCGTGCGCTGGCGACTCTTCTGAAACCTGCGGCGGAAGCA
ACGCGATAAGCGTGTACTGCTTCTGTGGTAGTCCCGGTGACGACCCTACG
GACGCAAGCCTAGGTTCCTGTACCATGGCGTGCGCTGGCGACTCTTCTGA
AACCTGCGGCGGAAGCAACGCGATAAGCGTGTAC
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