prot_H-paniculata_contig923.17025.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig923.17025.1
Unique Nameprot_H-paniculata_contig923.17025.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length271
Homology
BLAST of mRNA_H-paniculata_contig923.17025.1 vs. uniprot
Match: D7FTP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP9_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 1.640e-88
Identity = 152/262 (58.02%), Postives = 178/262 (67.94%), Query Frame = 0
Query:   10 IDRIHVKNGYGLRTSALSTSLIGCFDASSEKRKARNCEWDSQYTSDAEYQMAQLRGNHPARKVLHMQKCYPETVKRLNNRMIPEDDHEGDVISEQQKIPSRLPSTPAVNRLKNNRTVIKATPSLRRLDESNNSDQSPTTSCSADDSTRRRQVTNNEYNFCRGKMAYYRNRAREAEVDGILTGQSKLADKIPLFPARATHQQLLGLVRQPSYPDRPAPAVRRSLAWLGDNVGWEDNRGLPTPPAGCNAKDGEVHPWPSSQYHL 271
            +++I VKNGYG  TS LS S+IG FDASSE+RKA N  W+ +Y +DA +QM QL+GNHP RKVLHMQKCYPETV RLN +      HE D     + I  R    PA N   N  T +      RR   S  +D+S         +T RR+    EY+FCR KMAY R R REAEVDGILTG S L  ++PLFPA+ATHQQLLGLV +P++PD+PAPAV R   WLGDNVGWE NRG+ TPPAG NAKDGEVHPWPSSQY L
Sbjct:    1 MEQIRVKNGYGFLTSTLSASVIGDFDASSEERKATNRAWNQKYDTDAVFQMRQLQGNHPVRKVLHMQKCYPETVFRLNRQGRT---HEPDA---DRPISGRWHRNPAPN---NYNTSVATQQRHRRPQSSLQADRSADGGHELSGNTTRRRG-GYEYHFCRDKMAYNRTRGREAEVDGILTGTSPLDKRLPLFPAKATHQQLLGLVHRPTHPDKPAPAVPRERKWLGDNVGWEGNRGMATPPAGRNAKDGEVHPWPSSQYPL 252          
BLAST of mRNA_H-paniculata_contig923.17025.1 vs. uniprot
Match: A0A7S2XVD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVD6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.700e-14
Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
Query:  200 PLFPARATHQQLLGLVRQ--PSYPDRPAPAVRRSLAWLGDNVGWEDNRGLPTPPA-GCNAKDGEVHPWPSSQY 269
            P+FP  A+HQ  L + ++     P + AP  ++ L WLGD VGWE+NRGLPTPP  G + KDG + PWP+++Y
Sbjct:   25 PIFPQGASHQTQLTIDKKLVGDDPRKSAPPTKQPLRWLGDGVGWENNRGLPTPPGVGADGKDGAIKPWPTTKY 97          
BLAST of mRNA_H-paniculata_contig923.17025.1 vs. uniprot
Match: A0A835Z766_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z766_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.170e-12
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    7 GLPIDRIHVKNGYGLRTSALSTSLIGCFDASSEKRKARNCEWDSQYTSDAEYQMAQLRGNHPARKVLHMQKCYPETVKRLNNRM 90
            G+ + +  V NGYG  TS  S S IG +DAS+ KR+ ++  +  Q+ +DA YQ  +    HP +K LH+QKCYP+TVK L+  M
Sbjct:    9 GVEVHQRRVVNGYGSTTSLFSPSNIGLYDASALKRQQQSAAFVKQFEADAHYQRQEYSRKHPFKKQLHLQKCYPQTVKLLDGAM 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig923.17025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTP9_ECTSI1.640e-8858.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XVD6_9STRA2.700e-1447.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z766_9STRA5.170e-1244.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig923contigH-paniculata_contig923:16398..24734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig923.17025.1mRNA_H-paniculata_contig923.17025.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig923 16398..24734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig923.17025.1 ID=prot_H-paniculata_contig923.17025.1|Name=mRNA_H-paniculata_contig923.17025.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
MDSVQQGLPIDRIHVKNGYGLRTSALSTSLIGCFDASSEKRKARNCEWDS
QYTSDAEYQMAQLRGNHPARKVLHMQKCYPETVKRLNNRMIPEDDHEGDV
ISEQQKIPSRLPSTPAVNRLKNNRTVIKATPSLRRLDESNNSDQSPTTSC
SADDSTRRRQVTNNEYNFCRGKMAYYRNRAREAEVDGILTGQSKLADKIP
LFPARATHQQLLGLVRQPSYPDRPAPAVRRSLAWLGDNVGWEDNRGLPTP
PAGCNAKDGEVHPWPSSQYHL
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