prot_H-paniculata_contig918.16988.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig918.16988.1
Unique Nameprot_H-paniculata_contig918.16988.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length312
Homology
BLAST of mRNA_H-paniculata_contig918.16988.1 vs. uniprot
Match: D7G670_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G670_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 2.270e-38
Identity = 117/317 (36.91%), Postives = 148/317 (46.69%), Query Frame = 0
Query:    1 MLAMESSLTDCGSDDWSVDSDYAFQDFVDDDISPTINHDYTTFSQTPLARLRQNQGRVCEGADDT---SVITALGNRIPDKCSGGVVENDSLASGNLDQAILGGSSAQGFQSEAAKKPAVMTARNSSGREIAPEHDRLRCAKDAA--DGVCPSREDTRHLGDPGSSTENVHILRVEQRMFLKAAFQLLEERDRRSTALSGSHPVFSNWMGLGVTTPEEDNILGAATFNNVGGXXXXXXRGXXXXXXXXXXXXXXXXGFRYQESALIRRGILKSGTLRKATARCVGRLETTTWKTKNIELSPGRFAYADGGS-VLGKK 311
            M+A+ESS+  CGSDDWSVDSDYAFQDF DD     + H      Q   AR  +++  + + +  T   S +   G  I  +  G + +N    +  L +       A+     A    A          E      R   A +A   +   P   +TR  GDPGSS+++ HILR+EQRMFLKAAFQLLEERDR   A  GS      W   G               +N+         G                          R  ILKSGTLRKATAR VGRLE TTWKTK +EL+PG FAY+D G  V+GK+
Sbjct:    1 MIALESSVLGCGSDDWSVDSDYAFQDFADD-----VKH-----HQQQQARHEKSEQNLLQSSSPTRERSAVPNPGTPINKRVVGSLDDNSRAETTELHEHPEAAEGARADTLTAGGAQAXXXXXXXXPEEGEVGGSRRGSASEAGKDNRHHPVLSNTRLFGDPGSSSDSTHILRLEQRMFLKAAFQLLEERDRLFPASIGS------WGTAGGGWVXXXXXXXXXXXSNLRDRRGGYVNGGAVSAGKAGEGARFHFQQHEPNFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIVIGKR 301          
BLAST of mRNA_H-paniculata_contig918.16988.1 vs. uniprot
Match: A0A6H5KYB1_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 4.070e-14
Identity = 58/139 (41.73%), Postives = 68/139 (48.92%), Query Frame = 0
Query:  174 MFLKAAFQLLEERDRRSTALSGSHPVFSNWMGLGVTTPEEDNILGAATFNNVGGXXXXXXRGXXXXXXXXXXXXXXXXGFRYQESALI----RRGILKSGTLRKATARCVGRLETTTWKTKNIELSPGRFAYADGGSVL 308
            MFLKAAFQLLEERDR   A  GS   +    G  V           +   +  G       G                 F +Q+        R  ILKSGTLRKATAR VGRLE TTWKTK +EL+PG FAY+D G ++
Sbjct:    1 MFLKAAFQLLEERDRLFPASIGS---WGTAAGGWVPXXXXXXXXXXSNLRDQRG-------GYVNGAAVSAGKAGEGPRFHFQQHEPTFYANRPRILKSGTLRKATARSVGRLEKTTWKTKYVELTPGSFAYSDNGPIV 129          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig918.16988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G670_ECTSI2.270e-3836.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYB1_9PHAE4.070e-1441.73PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig918contigH-paniculata_contig918:11015..13180 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig918.16988.1mRNA_H-paniculata_contig918.16988.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig918 11015..13180 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig918.16988.1 ID=prot_H-paniculata_contig918.16988.1|Name=mRNA_H-paniculata_contig918.16988.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=312bp
MLAMESSLTDCGSDDWSVDSDYAFQDFVDDDISPTINHDYTTFSQTPLAR
LRQNQGRVCEGADDTSVITALGNRIPDKCSGGVVENDSLASGNLDQAILG
GSSAQGFQSEAAKKPAVMTARNSSGREIAPEHDRLRCAKDAADGVCPSRE
DTRHLGDPGSSTENVHILRVEQRMFLKAAFQLLEERDRRSTALSGSHPVF
SNWMGLGVTTPEEDNILGAATFNNVGGGGGSSSRGRGGAGGRGAGGAGGG
GGFRYQESALIRRGILKSGTLRKATARCVGRLETTTWKTKNIELSPGRFA
YADGGSVLGKK*
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