mRNA_H-paniculata_contig9149.16964.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: D8LMX0_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX0_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 4.020e-155 Identity = 255/344 (74.13%), Postives = 277/344 (80.52%), Query Frame = 1
Query: 1 LVQVFTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGK-----VGATPRSPGAIPV-------SPQ--LSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLREHGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
L +VFT GDKMRTACGTVYTMAPEVL+G GYTQKADLWSAGVIAF+LLS G PFLKDEADLND +V+ L QARF F P WKTVSA KGFVRGLLKKQPGFRWTAREALDHCAD WG + RAS+ADL+ QAE AA AE A + N V A P SP A P +P+ LSP SP+HASR R RAV GSIA SM RFADYGELKKAALM+TAFQL REEIKQLKDAFLE+D GNGAISL ELR+VLREHGVD AEVDRVFGAVDMD SG LHYMEFLAAT+EARGYIEEE LK+AFERLDVD TG+ISR NL++VLG TYD+GLIDKML+
Sbjct: 297 LSKVFTEGDKMRTACGTVYTMAPEVLSGDGYTQKADLWSAGVIAFILLS-GTFPFLKDEADLNDQGQVESLRQARFVFNDPAWKTVSAGAKGFVRGLLKKQPGFRWTAREALDHCADTWGLTFSRASFADLSGQAELAA-AENAANGIGNTSPIFTNVSAPPLSPSASPRGGGXXXGAPEAPLSPESPTHASRGRLRAVNGSIAKSMHRFADYGELKKAALMVTAFQLDREEIKQLKDAFLEVDTEGNGAISLEELRIVLREHGVDGAEVDRVFGAVDMDSSGHLHYMEFLAATIEARGYIEEESLKDAFERLDVDSTGFISRDNLKEVLGKTYDNGLIDKMLE 638
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A835ZEJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ0_9STRA) HSP 1 Score: 293 bits (749), Expect = 1.150e-88 Identity = 165/330 (50.00%), Postives = 214/330 (64.85%), Query Frame = 1
Query: 1 LVQVFTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLREHGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
L QVF G+ ++T GTVYTMAPEVL G+GYTQ++D+WS GVIAF LL G PFL+DE D ND + V RL RF FA P W V+ G+ V LL+ PGFRW+A+ AL HC W ++ R +Y ++ + +A ++ ANG T GA S A+R+ V IATS+R FA YGELKKAALM+TAFQL +EE+ LK AFLE+D NG I+ EL+ VLR+ GVD AE++R+F ++D D SG YMEFLAAT+EARG+IEE+RL E F+RLDVD +GYISR NL+ ++G Y ++D M+K
Sbjct: 253 LSQVFARGEALKTIVGTVYTMAPEVLLGSGYTQQSDIWSVGVIAFYLLC-GEYPFLRDEKDFNDEDLVQRLVTGRFEFAHPLWLAVTQEGRDLVINLLRLTPGFRWSAKRALSHCRQ-WEDAVQRGAYENM-----QRLLAVGSDRTAANGNGVGTVSVSGANSSEGAREGRPWSAATREHASNVDVKIATSIRSFAGYGELKKAALMITAFQLEKEELHHLKAAFLEIDTEENGVITYPELQAVLRKQGVDDAEIERLFASMDQDRSGLCSYMEFLAATLEARGFIEEDRLLETFQRLDVDNSGYISRANLKVLMGPLYPEAMLDAMMK 575
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A6U6K7F4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6K7F4_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.990e-61 Identity = 127/340 (37.35%), Postives = 200/340 (58.82%), Query Frame = 1
Query: 13 FTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKW--KTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADL-ANGKVGATPRSPGAI-------PVSPQL-SPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVL----REHGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKML 987
FT G+KM ACGTVYT APE+L GTGYT++ D+WS G++A+V+LS+ + PF+K ++ND K ++LA A+++F +W + +S G+ FV LKK PG RW A EAL++ D W P L S A E + ++ L +G+ G S G+ SP+L +P S AS K+ ++ + ++ FAD+ E+KK LM A+ + + + +L+D F +D G G I+L +L+ L + +D ++++F +D+D SG++HY EF+AA VE++G I E L AF+RLD GYIS+ +L ++LG D +++KM+
Sbjct: 95 FTKGEKMLKACGTVYTAAPELLLGTGYTEQTDIWSIGIVAWVMLSQAY-PFMKALEEMNDEAKKEQLANAQYTFGK-EWEDRKISKYGREFVANCLKKHPGARWFASEALEYVEDQWIPHL--ESLAPSLLDVENSCVSNNNSDSLDGSGQGGMETESGGSCNGDSADKTPSPKLCNPLERSVASTKKRTKMSSDVLEGLQNFADHSEIKKTILMTMAYTMDKSSLNELRDLFTVLDSKGTGTITLVDLKNALGKMHSDKHMDDKTIEKLFQGIDVDRSGQIHYNEFIAAVVESQGLITMEHLAVAFDRLDSSGKGYISKDDLRNMLGVDCDENMVNKMM 430
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A6U6KDL9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6KDL9_9STRA) HSP 1 Score: 212 bits (539), Expect = 8.440e-60 Identity = 127/340 (37.35%), Postives = 200/340 (58.82%), Query Frame = 1
Query: 13 FTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKW--KTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADL-ANGKVGATPRSPGAI-------PVSPQL-SPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVL----REHGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKML 987
FT G+KM ACGTVYT APE+L GTGYT++ D+WS G++A+V+LS+ + PF+K ++ND K ++LA A+++F +W + +S G+ FV LKK PG RW A EAL++ D W P L S A E + ++ L +G+ G S G+ SP+L +P S AS K+ ++ + ++ FAD+ E+KK LM A+ + + + +L+D F +D G G I+L +L+ L + +D ++++F +D+D SG++HY EF+AA VE++G I E L AF+RLD GYIS+ +L ++LG D +++KM+
Sbjct: 241 FTKGEKMLKACGTVYTAAPELLLGTGYTEQTDIWSIGIVAWVMLSQAY-PFMKALEEMNDEAKKEQLANAQYTFGK-EWEDRKISKYGREFVANCLKKHPGARWFASEALEYVEDQWIPHL--ESLAPSLLDVENSCVSNNNSDSLDGSGQGGMETESGGSCNGDSADKTPSPKLCNPLERSVASTKKRTKMSSDVLEGLQNFADHSEIKKTILMTMAYTMDKSSLNELRDLFTVLDSKGTGTITLVDLKNALGKMHSDKHMDDKTIEKLFQGIDVDRSGQIHYNEFIAAVVESQGLITMEHLAVAFDRLDSSGKGYISKDDLRNMLGVDCDENMVNKMM 576
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A7S1FMX8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMX8_9STRA) HSP 1 Score: 199 bits (505), Expect = 4.110e-55 Identity = 125/336 (37.20%), Postives = 193/336 (57.44%), Query Frame = 1
Query: 1 LVQVFTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKT--VSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLRE----HGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
L Q + ACGT+YT+APEVL G YT + D+WSAGV+AFVLLSE + PFLK+ DL D +K+ AR++ + WK +S+ K F+ LL+++PG RWTA+E+L+ W P L++ + D+ E+ ++ E E + P G + S L RKR R V S+ +MR+F +YG+ KK L+ A + + + LK+ FL +D G I L+EL++ L+E H +++++F +D D SG+++Y+EFLAA E G + + +++AF+RLD D +G+ISR+NL VLG+ + L+ MLK
Sbjct: 283 LSQRISKNQSNNRACGTIYTVAPEVLMGHPYTVQNDIWSAGVLAFVLLSEEY-PFLKNMKDLADEKKMANFVYARYTMSDT-WKERKISSFAKDFIANLLQREPGMRWTAKESLNFIQTKWIPHLVK-RHDDMYAIEEKNSL-ECPEFGM--------PSPRGVLENSTALK--------RKRLR-VESSLVAAMRQFGEYGQFKKMVLVTLAHTMDKSSLGDLKELFLSIDSENTGTILLSELKLALQEYAYNHNFTDEDIEKIFVGLDHDKSGQVYYIEFLAAVAEIYGLVTMDNVEDAFDRLDCDNSGFISRENLISVLGTDHCDKLVLNMLK 597
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A7S1B6N4_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6N4_9STRA) HSP 1 Score: 198 bits (504), Expect = 4.250e-55 Identity = 123/323 (38.08%), Postives = 190/323 (58.82%), Query Frame = 1
Query: 40 ACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKT--VSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLRE----HGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
ACGT+YT+APEVL G YT + D+WSAGV+AFVLLSE + PFLK+ DL D +K+ AR++ + WK +S+ K F+ LL+++PG RWTA+E+L+ W P L++ + D+ E+ ++ E E + P G + S L RKR R V S+ +MR+F +YG+ KK L+ A + + + LK+ FL +D G I L+EL++ L+E H +++++F +D D SG+++Y+EFLAA E G + + +++AF+RLD D +G+ISR+NL VLG+ + L+ MLK
Sbjct: 278 ACGTIYTVAPEVLMGHPYTVQNDIWSAGVLAFVLLSEEY-PFLKNMKDLADEKKMANFVYARYTMSDT-WKERKISSFAKDFIANLLQREPGMRWTAKESLNFIQTKWIPHLVK-RHDDMYAIEEKNSL-ECPEFGM--------PSPRGVLENSTALK--------RKRLR-VESSLVAAMRQFGEYGQFKKMVLVTLAHTMDKSSLGDLKELFLSIDSENTGTILLSELKLALQEYAYNHNFTDEDIEKIFVGLDHDKSGQVYYIEFLAAVAEIYGLVTMDNVEDAFDRLDCDNSGFISRENLISVLGTDHCDKLVLNMLK 579
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A7S2R207_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R207_9STRA) HSP 1 Score: 189 bits (481), Expect = 2.880e-53 Identity = 119/345 (34.49%), Postives = 192/345 (55.65%), Query Frame = 1
Query: 13 FTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKW--KTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGP---SLLRASYADLATQAE-----RAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSP-----SHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLRE----HGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
FT G+KM +CGTVYT APE+L G T++ D+WS GV+AF+LLS+ + PFLK +++DP K+ L A +SF +W + +++ + F+ LKK P R +A +ALD+ W P SL +D+ + + + +++ + AD +N + P S S S S AS ++ + M +F YGELKK LM ++ + + ++ L + F+ +D +G ++L +L+ L +D ++ +F VD+D SG++HY EFLAA VE++G I E L EAF+R+D D GYIS+ +L+ +LG D GL+++ML+
Sbjct: 64 FTRGEKMLKSCGTVYTAAPELLLKMGCTEQTDIWSIGVVAFILLSQEY-PFLKHTNEIHDPAKLQNLENATYSFG-DEWDHRNITSVARKFISSCLKKNPFMRCSALDALDYIQSPWIPHLESLHLERNSDICQKIDYRSSPQDSVSITSHADTSNSDID--------HPSSNHFSESKKNPLYRSTASTNNRIRMSTDMLQGMSKFGQYGELKKTILMTISYDMDKSSLQGLSELFIALDTSQDGTLTLLDLKRALERMKTGRHLDNYGIEEIFKGVDVDASGQIHYNEFLAAVVESQGLITMEHLAEAFDRIDNDGKGYISKGDLKQLLGQECDEGLVNRMLE 398
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A6U0UQP9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UQP9_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.830e-51 Identity = 121/332 (36.45%), Postives = 180/332 (54.22%), Query Frame = 1
Query: 22 GDKMRTACGTVYTMAPEVLAGT---GYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKTVSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQ-----LSPSSPSHASRKR-PRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLREHGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
G+ R CGT YTMAPEV T GY +AD+WSAGV+ +++L++G PFL+ L D V+R A++ F W+ VS + V LLK+ P R TA+EAL + DVW P + D E+ + E + + + I +SPQ L+P + + + V + SMR +A Y ELKK L++ A L R ++K++ F+ D+ G G I E + L H ++ E+ R+F AVDMD +GR+ Y EFLAA+VEA + E+ L++AF+R+D D +GYIS +NL D+LGS G + M++
Sbjct: 172 GEYFRRVCGTYYTMAPEVYFSTEAGGYGLQADMWSAGVLLYIMLAKGQFPFLESSEQLVDDILVERWRTAKYLFDPVTWQGVSHEARELVARLLKRLPTTRATAKEALTYLQDVWEPIFPKDE--DGYILKEKMLLREPSGEEES-------------IIMSPQNSVEDLTPLREGDSKTELLNQGVLEPMLKSMRDYASYSELKKKILLVVAHNLDRNKLKKMARDFVAFDRDGEGTIDFAEFQKALESHNMENEELKRIFEAVDMDHTGRIRYNEFLAASVEALEFREDAALQDAFDRMDSDNSGYISCQNLRDILGSDRSDGEVRAMIE 488
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A7S1B6C0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6C0_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.240e-51 Identity = 119/336 (35.42%), Postives = 183/336 (54.46%), Query Frame = 1
Query: 1 LVQVFTAGDKMRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKT--VSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLRE----HGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
L Q + ACGT+YT+APEVL G YT + D+WSAGV+AFVLLSE + PFLK+ DL D +K+ AR++ + WK +S+ K ++ L++ PG RWT +EALD W P L++ + ++ T E +P S PV P + + RK R V ++ +M++F +YG KK L+ A + + + LK+ FL +D G + L +L++ L+E H + ++ +F +D D SG++ Y+EFLAA E G + + + +AF+RLD D +G+I+++NL VLG+ Y LI KMLK
Sbjct: 283 LSQRISKNQSNNRACGTIYTVAPEVLMGHPYTVQNDIWSAGVLAFVLLSEEY-PFLKNMKDLADEKKMANFVYARYTMSDT-WKERKISSFAKDYIAKSLQRDPGSRWTTKEALDFIQTKWIPYLMK-RHDNMYTSEENR-----------------SPPSSERAPVIPSTILENSTALKRKHLR-VNSNLVAAMKQFGEYGRFKKMVLITLAHTMDKRSLGNLKELFLSIDSENTGTLHLRDLKLALQEYASKHDLTDDDIASMFVGLDSDQSGKVRYIEFLAAVAEIYGLVTMDNVADAFDRLDCDNSGFITKENLISVLGTDYCDDLILKMLK 597
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Match: A0A7S1FNB0_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNB0_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.370e-51 Identity = 117/323 (36.22%), Postives = 180/323 (55.73%), Query Frame = 1
Query: 40 ACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEADLNDPEKVDRLAQARFSFAAPKWKT--VSAAGKGFVRGLLKKQPGFRWTAREALDHCADVWGPSLLRASYADLATQAERAAMAEAAEADLANGKVGATPRSPGAIPVSPQLSPSSPSHASRKRPRAVAGSIATSMRRFADYGELKKAALMLTAFQLGREEIKQLKDAFLEMDKMGNGAISLNELRVVLRE----HGVDQAEVDRVFGAVDMDGSGRLHYMEFLAATVEARGYIEEERLKEAFERLDVDCTGYISRKNLEDVLGSTYDSGLIDKMLK 990
ACGT+YT+APEVL G YT + D+WSAGV+AFVLLSE + PFLK+ DL D +K+ AR++ + WK +S+ K ++ L++ PG RWT +EALD W P L++ + ++ T E +P S PV P + + RK R V ++ +M++F +YG KK L+ A + + + LK+ FL +D G + L +L++ L+E H + ++ +F +D D SG++ Y+EFLAA E G + + + +AF+RLD D +G+I+++NL VLG+ Y LI KMLK
Sbjct: 278 ACGTIYTVAPEVLMGHPYTVQNDIWSAGVLAFVLLSEEY-PFLKNMKDLADEKKMANFVYARYTMSDT-WKERKISSFAKDYIAKSLQRDPGSRWTTKEALDFIQTKWIPYLMK-RHDNMYTSEENR-----------------SPPSSERAPVIPSTILENSTALKRKHLR-VNSNLVAAMKQFGEYGRFKKMVLITLAHTMDKRSLGNLKELFLSIDSENTGTLHLRDLKLALQEYASKHDLTDDDIASMFVGLDSDQSGKVRYIEFLAAVAEIYGLVTMDNVADAFDRLDCDNSGFITKENLISVLGTDYCDDLILKMLK 579 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9149.16964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9149.16964.1 >prot_H-paniculata_contig9149.16964.1 ID=prot_H-paniculata_contig9149.16964.1|Name=mRNA_H-paniculata_contig9149.16964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp MRTACGTVYTMAPEVLAGTGYTQKADLWSAGVIAFVLLSEGHLPFLKDEAback to top mRNA from alignment at H-paniculata_contig9149:1280..9270- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9149.16964.1 ID=mRNA_H-paniculata_contig9149.16964.1|Name=mRNA_H-paniculata_contig9149.16964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7991bp|location=Sequence derived from alignment at H-paniculata_contig9149:1280..9270- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9149:1280..9270- >mRNA_H-paniculata_contig9149.16964.1 ID=mRNA_H-paniculata_contig9149.16964.1|Name=mRNA_H-paniculata_contig9149.16964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig9149:1280..9270- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |