mRNA_H-paniculata_contig12703.1695.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 93.2 bits (230), Expect = 5.810e-20 Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVK 300 IA A KE +LR LG IG C+ +T L DN+SA+ +++ + H RTKHI VR+H +RE G + L+YV TGDQ+AD+LTKGL + K Sbjct: 1033 IAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAK 1124
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A0L7QKC3_9HYME (Copia protein n=1 Tax=Habropoda laboriosa TaxID=597456 RepID=A0A0L7QKC3_9HYME) HSP 1 Score: 83.6 bits (205), Expect = 9.570e-19 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGL 288 +++ EA KE +YLR L ++GF + L+ DN+ AI L++ H RTKHI VR H +R+ R+ + LKYV TG+ +AD+LTKGL Sbjct: 1 MSMSEATKEAIYLRRFLRTLGFESQSRIQLYCDNQGAIKLAENPVFHNRTKHIDVRHHFVRDALRDKAIELKYVPTGEMVADVLTKGL 88
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A401H2X4_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H2X4_9APHY) HSP 1 Score: 85.9 bits (211), Expect = 6.660e-18 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 +A KE V+LR L IG +G T L DN+SAI LSK ++ H RTKHI VR+H IRE G + +YV TG+Q+AD+LTKGL R K + Sbjct: 210 MAGAHGTKEAVWLRTFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHE 303
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY) HSP 1 Score: 87.0 bits (214), Expect = 8.420e-18 Identity = 46/94 (48.94%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 +A KE ++LR L IG GST L DN+SAI L+K H RTKHI VR+H IRE G + +YV TG+Q+AD+LTKGL R K + Sbjct: 1030 MAGAHGTKEAIWLRAFLSEIGQAISGSTPLLIDNQSAIALAKNPEFHNRTKHIAVRYHFIREKYDSGDITPEYVPTGNQVADVLTKGLAREKHE 1123
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A4Y2H1X2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H1X2_ARAVE) HSP 1 Score: 85.5 bits (210), Expect = 1.490e-17 Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFG--CRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 IA AVKE ++LR+LL + C TLF DN+SAI L K H RTKHI VR+H IRE +G + +KYV++ +QLADI TK L +VKF+ Sbjct: 249 IATSTAVKEVLWLRQLLQDVSEIELCDEGITLFVDNQSAIKLIKNPVFHKRTKHIDVRYHFIREKCDDGSVNIKYVKSEEQLADIFTKALPKVKFE 344
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 82.8 bits (203), Expect = 1.580e-17 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 +A+ +E V++REL + G TT+FEDN+SAI+++K H R KHIG+++H IRE + +KY T D +ADI TKGL KF+ Sbjct: 78 MALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFE 171
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A4Y2TYG7_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2TYG7_ARAVE) HSP 1 Score: 83.6 bits (205), Expect = 1.830e-17 Identity = 48/96 (50.00%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFG--CRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 IA AVKE +LR+LL + G C TLF DN+SAI L K H RTKHI VR+H I E +G + +KYV+ +QLADI TK L +VKF+ Sbjct: 130 IAASIAVKEVSWLRQLLQDVSEGELCDEGITLFVDNQSAIKLIKNPVFHKRTKHIDVRYHFIGEKCDDGSVNIKYVKYEEQLADIFTKALPKVKFE 225
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A0L6WME8_9AGAR (Copia protein n=2 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WME8_9AGAR) HSP 1 Score: 80.1 bits (196), Expect = 1.880e-17 Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 37 EAVKETVYLRELLGSIGFGCRGS-TTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKF 303 E+ +E ++LR LL +IG+ + TT+F DNK+AI+LS+ +AH R KH +++H IRE + G +A+KYV T D +AD+ TK L + F Sbjct: 5 ESTQECIWLRMLLKAIGWDFTSNPTTMFCDNKAAISLSEDPTAHARVKHFDIKYHFIREHAHNGEIAIKYVNTRDNIADMFTKPLPKPLF 94
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A401H123_9APHY (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H123_9APHY) HSP 1 Score: 85.9 bits (211), Expect = 2.140e-17 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGLRRVKFQ 306 +A KE V+LR L IG +G T L DN+SAI LSK ++ H RTKHI VR+H IRE G + +YV TG+Q+AD+LTKGL R K + Sbjct: 1010 MAGAHGTKEAVWLRAFLSEIGQVQKGPTPLLIDNQSAIALSKNAAFHERTKHIAVRYHFIREKYDSGEIEPEYVPTGNQVADVLTKGLPREKHE 1103
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Match: A0A6G0RP41_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RP41_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.400e-17 Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 25 IAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKGSSAHCRTKHIGVRWHGIREWSREGILALKYVETGDQLADILTKGL 288 +A+ + VKE V++R LL IG G+T ++EDN+ A+ L+K RTKHI +R+H IRE + L+YV+T +QLAD +TKGL Sbjct: 1 MALSDCVKECVWMRRLLKDIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSNEVELEYVDTKNQLADFMTKGL 88 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12703.1695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12703.1695.1 >prot_H-paniculata_contig12703.1695.1 ID=prot_H-paniculata_contig12703.1695.1|Name=mRNA_H-paniculata_contig12703.1695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp MVQYRGRDIAVGEAVKETVYLRELLGSIGFGCRGSTTLFEDNKSAINLSKback to top mRNA from alignment at H-paniculata_contig12703:1632..1937- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12703.1695.1 ID=mRNA_H-paniculata_contig12703.1695.1|Name=mRNA_H-paniculata_contig12703.1695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=306bp|location=Sequence derived from alignment at H-paniculata_contig12703:1632..1937- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12703:1632..1937- >mRNA_H-paniculata_contig12703.1695.1 ID=mRNA_H-paniculata_contig12703.1695.1|Name=mRNA_H-paniculata_contig12703.1695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig12703:1632..1937- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |