prot_H-paniculata_contig12697.1687.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12697.1687.1
Unique Nameprot_H-paniculata_contig12697.1687.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.910e-64
Identity = 107/177 (60.45%), Postives = 132/177 (74.58%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHI-GFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSY 179
            DV+ WC  CQ CQR KT H RPKLP GH+P+ +PFERIS+DLV YK L  S  G +C YVLS +DHLTR A+L P+PNK+ ET+A V+ E I   F PPE L+SDQG E EN++++QLQ+V  Y+K RT  Y PQGNSVSER  ST  AMLSM+S++ +DNWA LLP +QLA NTS+
Sbjct:  529 DVRNWCLECQACQRRKTPHRRPKLPTGHVPVQQPFERISVDLVEYKTLSKSHTGVYCKYVLSMMDHLTRFAVLTPIPNKSAETVANVLIEKIISIFGPPEMLHSDQGTEFENKIIHQLQSVLGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHSSMERDNWAELLPMVQLAYNTSF 705          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 7.230e-64
Identity = 104/177 (58.76%), Postives = 129/177 (72.88%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHI-GFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSY 179
            D++ WC  CQ CQR KT H RPKLP GH+P+ RPFERIS+DLV YK + +S  G  C YVLS +DHLTR A+L P+PNK  ET+A VI + I   F PPE L+SDQG E EN+V++QLQ +  YKK  T  Y PQGNSVSER  ST  +ML+M+S++ +DNWA LLP +QLA NTS+
Sbjct:  424 DIRNWCRKCQACQRRKTPHRRPKLPTGHLPVQRPFERISVDLVEYKTISMSAVGAPCKYVLSMMDHLTRYAILTPIPNKTAETVAKVIIDRIISTFGPPEMLHSDQGTEFENKVIHQLQTILGYKKTCTTPYRPQGNSVSERVHSTMHSMLAMHSSMGRDNWAELLPMVQLAYNTSF 600          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5KRQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ8_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 6.640e-31
Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 0
Query:    1 MHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIA-AVINEHIGFFEPPEFLYS 106
            M+ DV+TWC  CQ CQR KT HNR KLP GH+P+ RPFERIS+DLV Y +  +S     C YVLS +DHLTR  +L P+PNK+  T+A A+I+  IG F  PE L+S
Sbjct:  502 MNRDVRTWCQECQACQRRKTAHNRNKLPTGHVPVQRPFERISVDLVEYNVESVSTAWVRCKYVLSTMDHLTRFTVLTPIPNKSAATVAQAIIDRIIGIFGAPEMLHS 608          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: UPI001F077980 (uncharacterized protein LOC124482050 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F077980)

HSP 1 Score: 94.4 bits (233), Expect = 5.400e-19
Identity = 58/176 (32.95%), Postives = 93/176 (52.84%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEH-IGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 178
            DVK W + C  C   KT   +P  P+    ++RPFER+++D++G     L        Y+L   D+ ++     P+PN+   TIA V+ E  +  F  P  ++SDQGR  ++ +  +L  +    K+RT  Y PQ + + ER   T  +MLS++    Q NW +LLP++ LA  +S
Sbjct:  326 DVKQWVAKCVDCASRKTQGKQPCAPLQPSVVSRPFERVALDILGP----LPETPQKNKYILVVGDYFSKWTEAFPLPNQEAGTIAKVLTEEWVCRFGAPRSIHSDQGRNFDSNLFRELCKLLHIHKSRTSPYHPQSDGMIERFNRTLLSMLSLFVGDNQLNWDTLLPYVMLAYRSS 497          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A0V1N0D6_9BILA (Transposon Tf2-11 polyprotein n=1 Tax=Trichinella papuae TaxID=268474 RepID=A0A0V1N0D6_9BILA)

HSP 1 Score: 91.7 bits (226), Expect = 4.980e-18
Identity = 59/189 (31.22%), Postives = 95/189 (50.26%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIA-AVINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITG 191
            DV+ WC  CQ C     +  +P+ P+   P+  PF+R+ +D+VG     L    +   Y+L   D+ ++      +PN    T+A A++N     +  PE L+SDQGR LE+++V ++  +F   K RT  Y PQ + + ER   T   +L+  S    D+W + L  + LA  +S       VH+ TG
Sbjct:  285 DVEDWCRACQTCAARAVLTKKPQAPMQLQPVGYPFQRVGMDIVGS----LEETQSGNRYILVVCDYFSKWPEAFALPNAEARTVATALVNGIFCRYGAPETLHSDQGRNLESELVKEVCQLFGVAKTRTTAYHPQSDGLVERMNRTLLDLLAKASIDHPDDWDAHLDRVLLAYRSS-------VHHTTG 462          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A293LM44_ORNER (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LM44_ORNER)

HSP 1 Score: 88.6 bits (218), Expect = 5.890e-17
Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHI-PLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHIGFFEP-PEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 178
            DV  +C  C  C   KT   R + P+     + RPFER ++D++G   L ++  G    Y+L F+DHLTR A ++P+PN+  ET+A    E +      P  L +DQG    ++++  +  + +  K +T  Y PQ N   ER   T   +LS Y    Q +W   +PF   A NT+
Sbjct:  256 DVGAYCKQCHSCAERKTPKGRKRAPMQVFGDVGRPFERTAMDIIGP--LPVTTAGN--RYMLVFVDHLTRFAEVMPIPNQKAETVAKHFVEGVVLRHGVPRQLLTDQGTNFLSKLMKDVCKLLNINKIQTTPYHPQSNGAVERFNQTLTNLLSHYVAHDQRDWDEWVPFAMFAYNTA 428          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A498LSR0_LABRO (Ribonuclease H n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LSR0_LABRO)

HSP 1 Score: 86.7 bits (213), Expect = 2.950e-16
Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIA-AVINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITGQ 192
            DV+ WC  C  CQ  K    R +  +G +  +RP + +++D        L P  +    VL   D  ++  L VP  ++  ET+A A++ E    F  P  L+SDQGR  E++++YQL N +  +K+RT  Y P GN   ER   T   +L       + +W + LP +  + N+       T H  TG+
Sbjct:  537 DVERWCQECDRCQAAKDTQPRAQGFMGRLLSSRPNDILAVDFT-----VLEPTSSGIENVLVMTDVFSKYTLAVPTRDQRAETVAQALVTEWFYRFGVPCRLHSDQGRNFESRLIYQLCNFYGVEKSRTTPYHPAGNGQCERFNRTLHNLLRTLPVSRKRDWEACLPQVVFSYNS-------TPHQATGE 714          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A7M7P4U5_STRPU (Uncharacterized protein n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7P4U5_STRPU)

HSP 1 Score: 85.9 bits (211), Expect = 5.860e-16
Identity = 57/182 (31.32%), Postives = 85/182 (46.70%), Query Frame = 0
Query:    1 MHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINE----HIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 178
            M  ++  W   C  C   K+ H  P  P+  I  T P E + +D +      L P  +    +L   DH TR A   P  ++  +T+A V+ E    H G    P+ L+SDQGR+ E++V+Y+L  +   +K+RT  Y PQG+   ER   T   ML       + NW+  +  L  A N S
Sbjct: 1443 MSAEITEWVKHCPRCVARKS-HQHPSAPLVSIKTTSPLELVCMDFLS-----LEPDRSNKKSILVVTDHYTRYAQAFPTKDQTAKTVAKVLWENFFVHYGL---PQRLHSDQGRDFESKVIYELTRLLGVQKSRTTPYHPQGDPQPERFNRTLLGMLGTLEEEKKQNWSKYVSALVHAYNCS 1615          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A3P9JCJ9_ORYLA (Integrase catalytic domain-containing protein n=2 Tax=Oryzias latipes TaxID=8090 RepID=A0A3P9JCJ9_ORYLA)

HSP 1 Score: 83.2 bits (204), Expect = 4.140e-15
Identity = 53/187 (28.34%), Postives = 87/187 (46.52%), Query Frame = 0
Query:    5 VKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITG 191
            ++ WC  C++C   K+     + P+GH+  ++P E ++ID        L P       VL   D  ++   ++P  ++   T+A +I E    F  P  L+S+QG   EN ++YQL  ++  +K+RT  Y PQGN   E+   T   +L       + +W   LP +  + NT       T H  TG
Sbjct:  312 IRDWCLKCELCCLAKSTQPHVRAPMGHLLASKPNEILAIDFS-----MLEPARDGREQVLVMTDVFSKFTQVLPTRDQRASTVADLIKEWFYKFGVPTRLHSNQGHCFENNIIYQLCELYGVEKSRTTPYHPQGNGQCEQFNRTLHDLLRTIPVDQKYSWPEYLPQILFSYNT-------TPHQSTG 486          
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A4Y2RD72_ARAVE (RNA-directed DNA polymerase n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2RD72_ARAVE)

HSP 1 Score: 82.8 bits (203), Expect = 5.930e-15
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 0
Query:    4 DVKTWCSGCQVCQRWKTVHNRPKLPVGHI----PLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPN-KATETIAAVINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 178
              + + S C+ CQR KT    P+LP G +    P   PF ++ IDL+G    F     +   +++   D+LTR  +   +P  +A E    ++ E I     P+ + SD+GR   + +V  +  +       T  Y PQ N ++ER   T   MLSMY++V Q NW ++LPF+  A N++
Sbjct:  392 STRRYISHCKECQRRKTP---PQLPPGRLQPIEPPDIPFAKVGIDLLG----FFPVTRSGNRWIIVCTDYLTRFTVTKALPTGEAIEVAKFIVEEIILKHGSPKEMISDRGRTFLSNLVKTINELCQTSHLLTTAYHPQTNGLTERFNKTLADMLSMYTDVEQKNWDTVLPFVTFAYNSA 564          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU37_9PHAE1.910e-6460.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUM8_9PHAE7.230e-6458.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRQ8_9PHAE6.640e-3156.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001F0779805.400e-1932.95uncharacterized protein LOC124482050 n=1 Tax=Hypom... [more]
A0A0V1N0D6_9BILA4.980e-1831.22Transposon Tf2-11 polyprotein n=1 Tax=Trichinella ... [more]
A0A293LM44_ORNER5.890e-1732.77RNA-directed DNA polymerase (Fragment) n=1 Tax=Orn... [more]
A0A498LSR0_LABRO2.950e-1630.53Ribonuclease H n=1 Tax=Labeo rohita TaxID=84645 Re... [more]
A0A7M7P4U5_STRPU5.860e-1631.32Uncharacterized protein n=3 Tax=Strongylocentrotus... [more]
A0A3P9JCJ9_ORYLA4.140e-1528.34Integrase catalytic domain-containing protein n=2 ... [more]
A0A4Y2RD72_ARAVE5.930e-1531.11RNA-directed DNA polymerase n=3 Tax=Araneus ventri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 31..192
e-value: 6.8E-25
score: 89.4
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 35..151
e-value: 1.1E-10
score: 41.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 33..198
score: 15.629
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 1..179
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..179
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 35..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12697contigH-paniculata_contig12697:3477..4073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12697.1687.1mRNA_H-paniculata_contig12697.1687.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12697 2198..7551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12697.1687.1 ID=prot_H-paniculata_contig12697.1687.1|Name=mRNA_H-paniculata_contig12697.1687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKL
LFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHIGFFEP
PEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTR
AMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITGQDSVVCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf