mRNA_H-paniculata_contig12697.1687.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig12697.1687.1
Unique Name	mRNA_H-paniculata_contig12697.1687.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 4.600e-62
Identity = 111/190 (58.42%), Postives = 137/190 (72.11%), Query Frame = 1

Query:  718 KAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHI-GFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSY 1284
            K   +YWWPTM  D++ WC  CQ CQR KT H RPKLP GH+P+ RPFERIS+DLV YK + +S  G  C YVLS +DHLTR A+L P+PNK  ET+A VI + I   F PPE L+SDQG E EN+V++QLQ +  YKK  T  Y PQGNSVSER  ST  +ML+M+S++ +DNWA LLP +QLA NTS+
Sbjct:  411 KIRQKYWWPTMARDIRNWCRKCQACQRRKTPHRRPKLPTGHLPVQRPFERISVDLVEYKTISMSAVGAPCKYVLSMMDHLTRYAILTPIPNKTAETVAKVIIDRIISTFGPPEMLHSDQGTEFENKVIHQLQTILGYKKTCTTPYRPQGNSVSERVHSTMHSMLAMHSSMGRDNWAELLPMVQLAYNTSF 600

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 5.190e-62
Identity = 113/191 (59.16%), Postives = 141/191 (73.82%), Query Frame = 1

Query:  715 DKAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHI-GFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSY 1284
            +K   +YWWP+M  DV+ WC  CQ CQR KT H RPKLP GH+P+ +PFERIS+DLV YK L  S  G +C YVLS +DHLTR A+L P+PNK+ ET+A V+ E I   F PPE L+SDQG E EN++++QLQ+V  Y+K RT  Y PQGNSVSER  ST  AMLSM+S++ +DNWA LLP +QLA NTS+
Sbjct:  515 EKIRQKYWWPSMSRDVRNWCLECQACQRRKTPHRRPKLPTGHVPVQQPFERISVDLVEYKTLSKSHTGVYCKYVLSMMDHLTRFAVLTPIPNKSAETVANVLIEKIISIFGPPEMLHSDQGTEFENKIIHQLQSVLGYQKTRTTPYRPQGNSVSERVHSTMHAMLSMHSSMERDNWAELLPMVQLAYNTSF 705

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5KRQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ8_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 6.190e-33
Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 1

Query:  715 DKAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIA-AVINEHIGFFEPPEFLYS 1065
            +K   +YWWPTM+ DV+TWC  CQ CQR KT HNR KLP GH+P+ RPFERIS+DLV Y +  +S     C YVLS +DHLTR  +L P+PNK+  T+A A+I+  IG F  PE L+S
Sbjct:  491 EKIRQKYWWPTMNRDVRTWCQECQACQRRKTAHNRNKLPTGHVPVQRPFERISVDLVEYNVESVSTAWVRCKYVLSTMDHLTRFTVLTPIPNKSAATVAQAIIDRIIGIFGAPEMLHS 608

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A7M3RC88_SPIER (Hypothetical protein n=1 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RC88_SPIER)

HSP 1 Score: 107 bits (266), Expect = 1.090e-20
Identity = 64/199 (32.16%), Postives = 106/199 (53.27%), Query Frame = 1

Query:  730 RYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAA-VINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMY-SNVAQDNWASLLPFLQLARNTSYRGMETTVHNITG 1320
            R+WWPT+H DV ++C+ CQVC + K+    P+  +  I +  P  RI +D++G     L        ++L  +D+ T+    VP+  +  +++AA ++N+ I  +  P  ++SD+G   EN ++ +L ++   KK RT  Y P+GN + ER   T + +LS +    + D W   LP   LA    YR   T VH+ TG
Sbjct:   32 RFWWPTIHQDVVSYCTACQVCAQIKSPIPAPRALLHPIAVDGPNHRIGVDIIGP----LPTTRRGDRFILVMVDYFTKWCEAVPLQTQDAKSVAAAILNDWISRYGAPTIIHSDRGTAFENHLLAELCSLLQIKKTRTTPYHPEGNGLVERTNRTIKRILSAFVDRESSDAWDEHLPQCLLA----YR---TAVHDSTG 219

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: UPI001F077980 (uncharacterized protein LOC124482050 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F077980)

HSP 1 Score: 106 bits (265), Expect = 8.180e-20
Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 1

Query:  718 KAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEH-IGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 1281
            K  DR++WP    DVK W + C  C   KT   +P  P+    ++RPFER+++D++G     L        Y+L   D+ ++     P+PN+   TIA V+ E  +  F  P  ++SDQGR  ++ +  +L  +    K+RT  Y PQ + + ER   T  +MLS++    Q NW +LLP++ LA  +S
Sbjct:  313 KVKDRFYWPGWFRDVKQWVAKCVDCASRKTQGKQPCAPLQPSVVSRPFERVALDILGP----LPETPQKNKYILVVGDYFSKWTEAFPLPNQEAGTIAKVLTEEWVCRFGAPRSIHSDQGRNFDSNLFRELCKLLHIHKSRTSPYHPQSDGMIERFNRTLLSMLSLFVGDNQLNWDTLLPYVMLAYRSS 497

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A0V1N0D6_9BILA (Transposon Tf2-11 polyprotein n=1 Tax=Trichinella papuae TaxID=268474 RepID=A0A0V1N0D6_9BILA)

HSP 1 Score: 105 bits (262), Expect = 2.780e-19
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 1

Query:  712 LDKAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIA-AVINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITG 1320
            L K   RY+WP    DV+ WC  CQ C     +  +P+ P+   P+  PF+R+ +D+VG     L    +   Y+L   D+ ++      +PN    T+A A++N     +  PE L+SDQGR LE+++V ++  +F   K RT  Y PQ + + ER   T   +L+  S    D+W + L  + LA  +S       VH+ TG
Sbjct:  270 LAKVRQRYYWPQQREDVEDWCRACQTCAARAVLTKKPQAPMQLQPVGYPFQRVGMDIVGS----LEETQSGNRYILVVCDYFSKWPEAFALPNAEARTVATALVNGIFCRYGAPETLHSDQGRNLESELVKEVCQLFGVAKTRTTAYHPQSDGLVERMNRTLLDLLAKASIDHPDDWDAHLDRVLLAYRSS-------VHHTTG 462

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5LN90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN90_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 7.420e-19
Identity = 49/103 (47.57%), Postives = 63/103 (61.17%), Query Frame = 1

Query:  694 PSV*AHL------DKAHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPV 984
            PS   HL      DK  DRYWWPTMH D+      C+ CQR KT +  P+LPVGH P+T+PF+ +++DLV YK L          Y+LS IDHLTR  +L+P+
Sbjct:  508 PSSGGHLAFKGTFDKVRDRYWWPTMHSDITRHVQSCESCQRRKTSYRPPQLPVGHRPVTQPFQCVAVDLVEYKSL-----SEGNRYILSVIDHLTRFVILIPI 605

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A654HVS5_9CEST (Integrase catalytic domain-containing protein n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HVS5_9CEST)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-17
Identity = 69/232 (29.74%), Postives = 116/232 (50.00%), Query Frame = 1

Query:  730 RYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAA-VINEHIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSER-NRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITGQDSVVCC*LNPRHYCAQLS**LISQ*D-KMG*C 1416
            R+WWPT+H DV ++C+ C+VC + K+    P+  +  I +  P  RI +D++G     L        ++L  +D+ T+    VP+  + T+++AA ++N+ I  +  P  ++SD+G   EN ++ +L  +   +K RT  Y P+GN + E  NR+  R + +     + D W   LP   LA    YR   T VH+ TG    +    +   + A +   LIS     MG C
Sbjct:  148 RFWWPTIHQDVVSYCTACKVCAQIKSPIPAPRALLYPIAVDGPNHRIGVDIIGP----LPTTRRGNRFILVMVDYFTKWCEAVPLQTQDTKSVAATILNDWISRYGAPTIIHSDRGTAFENHLLAELCPLLQIRKTRT-PYHPEGNGLVESTNRTIKRILYAFVDRESSDAWDEHLPQCMLA----YR---TAVHDSTGFSPALLQLGHELRFPADIHSPLISAEPLNMGEC 367

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A6H5KJC7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC7_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.230e-17
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 2

Query:  350 LEPVRSDLELFNVSPIYASATQVFTSVDPEKLRQAQGREFGSYLKYLADNKDPLPHNETVPSMSYYFEQDGLLFRSYLPGYLRKWSTFRNQL 625
            + PV SD ELF VS     AT+VF SV+ +KLR+ Q  E+G Y+KY+     PLP  ET  +MSYY  QDGLLF+SYLPG+LRK STF +QL
Sbjct:  398 VRPVHSDRELFTVS-----ATEVFQSVNHDKLREKQMDEYGDYIKYILHENAPLPDRETETTMSYYSIQDGLLFKSYLPGHLRKRSTFSDQL 484

[Close]

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Match: A0A7M7P4U5_STRPU (Uncharacterized protein n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7P4U5_STRPU)

HSP 1 Score: 100 bits (250), Expect = 1.950e-17
Identity = 62/191 (32.46%), Postives = 92/191 (48.17%), Query Frame = 1

Query:  721 AHDRYWWPTMHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKLLFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINE----HIGFFEPPEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTRAMLSMYSNVAQDNWASLLPFLQLARNTS 1281
            A DR++WP M  ++  W   C  C   K+ H  P  P+  I  T P E + +D +      L P  +    +L   DH TR A   P  ++  +T+A V+ E    H G    P+ L+SDQGR+ E++V+Y+L  +   +K+RT  Y PQG+   ER   T   ML       + NW+  +  L  A N S
Sbjct: 1434 ARDRFYWPKMSAEITEWVKHCPRCVARKS-HQHPSAPLVSIKTTSPLELVCMDFLS-----LEPDRSNKKSILVVTDHYTRYAQAFPTKDQTAKTVAKVLWENFFVHYGL---PQRLHSDQGRDFESKVIYELTRLLGVQKSRTTPYHPQGDPQPERFNRTLLGMLGTLEEEKKQNWSKYVSALVHAYNCS 1615

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12697.1687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KUM8_9PHAE	4.600e-62	58.42	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JU37_9PHAE	5.190e-62	59.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KRQ8_9PHAE	6.190e-33	55.93	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7M3RC88_SPIER	1.090e-20	32.16	Hypothetical protein n=1 Tax=Spirometra erinaceieu...	[more]
UPI001F077980	8.180e-20	33.33	uncharacterized protein LOC124482050 n=1 Tax=Hypom...	[more]
A0A0V1N0D6_9BILA	2.780e-19	31.86	Transposon Tf2-11 polyprotein n=1 Tax=Trichinella ...	[more]
A0A6H5LN90_9PHAE	7.420e-19	47.57	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A654HVS5_9CEST	1.230e-17	29.74	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KJC7_9PHAE	1.230e-17	56.52	Reverse transcriptase domain-containing protein n=...	[more]
A0A7M7P4U5_STRPU	1.950e-17	32.46	Uncharacterized protein n=3 Tax=Strongylocentrotus...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12697	contig	H-paniculata_contig12697:2198..7551 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Metazoa
Seed ortholog score	110.2
Seed ortholog evalue	1.2e-21
Seed eggNOG ortholog	6334.EFV50733
Hectar predicted targeting category	other localisation
EggNOG free text desc.	transposition, RNA-mediated
EggNOG OGs	39TC6@33154,3BHT2@33208,3D2MB@33213,COG2801@1,KOG0017@2759
COG Functional cat.	J
Best tax level	Bilateria
Best eggNOG OG	NA\|NA\|NA
Exons	2
Model size	4822
Cds size	597
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12697.1687.1	prot_H-paniculata_contig12697.1687.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig12697 3477..4073 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928991.2768924-UTR-H-paniculata_contig12697:2197..2445	1622928991.2768924-UTR-H-paniculata_contig12697:2197..2445	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 2198..2445 +
1691480693.4209225-UTR-H-paniculata_contig12697:2197..2445	1691480693.4209225-UTR-H-paniculata_contig12697:2197..2445	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 2198..2445 +
1622928991.2934217-UTR-H-paniculata_contig12697:2977..3476	1622928991.2934217-UTR-H-paniculata_contig12697:2977..3476	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 2978..3476 +
1691480693.4328485-UTR-H-paniculata_contig12697:2977..3476	1691480693.4328485-UTR-H-paniculata_contig12697:2977..3476	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 2978..3476 +
1622928991.3253334-UTR-H-paniculata_contig12697:4073..7551	1622928991.3253334-UTR-H-paniculata_contig12697:4073..7551	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 4074..7551 +
1691480693.450787-UTR-H-paniculata_contig12697:4073..7551	1691480693.450787-UTR-H-paniculata_contig12697:4073..7551	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig12697 4074..7551 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928991.3103435-CDS-H-paniculata_contig12697:3476..4073	1622928991.3103435-CDS-H-paniculata_contig12697:3476..4073	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12697 3477..4073 +
1691480693.4418817-CDS-H-paniculata_contig12697:3476..4073	1691480693.4418817-CDS-H-paniculata_contig12697:3476..4073	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig12697 3477..4073 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig12697:2198..7551+
coding sequence from alignment at H-paniculata_contig12697:2198..7551+

protein sequence of mRNA_H-paniculata_contig12697.1687.1

>prot_H-paniculata_contig12697.1687.1 ID=prot_H-paniculata_contig12697.1687.1|Name=mRNA_H-paniculata_contig12697.1687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MHCDVKTWCSGCQVCQRWKTVHNRPKLPVGHIPLTRPFERISIDLVGYKL
LFLSPPGTWCTYVLSFIDHLTRIALLVPVPNKATETIAAVINEHIGFFEP
PEFLYSDQGRELENQVVYQLQNVFDYKKARTIGYCPQGNSVSERNRSTTR
AMLSMYSNVAQDNWASLLPFLQLARNTSYRGMETTVHNITGQDSVVCC*

mRNA from alignment at H-paniculata_contig12697:2198..7551+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig12697.1687.1 ID=mRNA_H-paniculata_contig12697.1687.1|Name=mRNA_H-paniculata_contig12697.1687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5354bp|location=Sequence derived from alignment at H-paniculata_contig12697:2198..7551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATCCCAGCTTACAGCACCCAAGCAAAAACGAACCGCTTTGGAAGCCCG
ACAGGAAGCAGCCGAGGGCTGGGAGGGTCGTTGCGCGCCCCGAGTGCCGG
CGAGCGTGTGAAAATGTGGCGCGGGAGTGCACGGGCAAGTGCCCGCTTGA
GGGGGTGGCTGGGCGGGTGCTCGATTGTGGGCGTCAGAACGATCGACAGA
GGAGGAGCGGAGTGGAAGTGAGTAGTTCGCAGCGGAAATCCGGGGAAGGT
GAGGAAAGCGTTTTGTTTTAGATTTTCAATTCTGATACTTGCGTCTAAGC
GTGTTTGGTGTTTACGTTGCTTGGTCGATGCATCAAAAGTCCGGAGAGAC
CAAACCATGCTTATTTTTGCTCTATTTTATGTGGTTTTATGTAGGTCAAA
CCTGAGAACCTTGCGCTGGCGCTGTTTTCACTCGCATCCGACGGGAAAGG
CGTGTTTTCTTCGCCCTTCTCCTTGCCCCCAGTGTGTACGTGCAAGTTTC
AAGATTTGTTTTTGTTGTTTTTGTTGTTTTTGTGTGATTTTTTACCGGAG
AGGTCTGAATAGTAACGTGGAGACCACGTTCACCACGTTCCTGGGGTTCC
TGAACCCCAGGCCCTACACAACAACCAATGGTATTTTGTCCCTTTCTCGG
AACAGCTTTCTAGCGGTGTCCGACCCTGGATGGGCAGTCCGTCTTGTGAT
TCAACCACCTTCGATGCTACCGAGACGCATGCCTGCCTACTCTTTCCCCT
CTTGTACCGAACAAAATTACACCCATTCAGCGCATAAAAACGGATAGAAC
AGACAGAACGCGTCGCTTCGCTATCAAGAACGATTCCGCGGCCGCCGGGC
GCTACCTTTCCCATTCAAGAAGGGCGGCGTCCTGGAACCGGTGAGGAGCG
ACCTGGAGCTGTTCAATGTGAGTCCGATCTACGCCAGCGCGACTCAGGTA
TTCACATCAGTTGATCCGGAAAAGTTACGTCAAGCTCAAGGCCGTGAATT
TGGGTCGTACTTGAAATATCTTGCAGATAATAAAGATCCGTTACCGCATA
ACGAAACAGTACCATCTATGTCGTATTATTTCGAGCAAGACGGACTCCTA
TTCAGATCGTACTTACCCGGGTACTTGAGGAAATGGAGCACATTCCGCAA
CCAGTTAGTCGGGTCGCAATCTCTCGTAGGAGTAATTTTAAATGCATCTC
ACGACCGCGCGATGTCAGGAAGGCACCTAGCGTATAAGCCCACCTTGATA
AAGCCCATGACCGTTACTGGTGGCCAACAATGCATTGCGACGTGAAAACT
TGGTGCAGTGGTTGCCAGGTGTGTCAACGCTGGAAAACCGTCCACAACCG
TCCGAAATTACCGGTGGGTCATATACCACTAACAAGACCATTCGAGCGAA
TTTCGATAGACTTGGTGGGGTACAAATTACTCTTCCTCTCCCCACCTGGG
ACTTGGTGCACGTATGTGCTCTCATTCATCGATCACCTTACTCGAATTGC
ACTATTAGTTCCAGTGCCGAATAAAGCAACAGAGACCATCGCAGCGGTAA
TTAATGAACATATTGGATTTTTCGAACCTCCAGAATTTTTGTACTCCGAC
CAGGGTCGGGAACTTGAGAATCAAGTCGTGTACCAACTGCAGAACGTGTT
TGACTACAAGAAAGCACGCACGATCGGGTACTGTCCGCAGGGTAACTCTG
TTTCGGAACGGAATCGCTCGACGACGCGTGCAATGTTATCCATGTATAGC
AACGTAGCTCAGGACAATTGGGCATCCCTTTTGCCATTTTTGCAGCTAGC
CCGTAATACATCTTACAGGGGCATGGAAACAACAGTGCACAATATCACTG
GACAAGATTCGGTGGTATGTTGTTGACTAAACCCAAGACACTACTGTGCT
CAGCTCTCATAATGATTAATATCCCAATGAGACAAAATGGGGTAATGCCA
AACTAATTAGTTGTGGCTCACGATTCGAACCCAGCGGTATAACTCGAAAC
GTTGCTGATTAGTCCGTATTATCTCAAGCGTTTGTAGTTGGGTCCGTCAT
TATCGCCCTCCGATTCGCCAAACTCATCTCCAATGCGTCTCGAACTGCTT
TACTGGTCGGAGACGCATAGCCGGGGGGGGGGGTGATGCGGAGAGCCCGT
TCCTGACGTTCCTTGGGTTCCTAAACCCCGGCCCACTACACAACAACCAA
TTGTATTTTACCCCTTTCTCGGAACAGCTTTTTAGCTGTGTTCGACCCTG
GATGGGCAGTCCACCTACGAGATAACAAAACCCAAGTGCTTGCTCTGCAC
TACATTCCAAGACCTAGAACCGACCCGCATGGAATAGGTGGTGTCCCCTC
GAGAGTCAGTCTCTCCCGGGAGCATCGTGTTCTCAGTAATGTGCTTTTGT
TTGGAAAATAACACAAAGTTATTGCATGGGAGACCAACTTCGGCATTCTG
TTGACGAACCTTGTGAGAAAAGAGAACCTCAAGACCCTAGCGAGTGCGCG
GGCCCAGCATCAGCGAGATACGCTACCCACGGCACCGCCACCCACCCCTC
GGCAAGATGGTATCCTCCTCGACTGTAAGCTTCGTGAAATTGTTGACATT
CTCAGGGATTACCAGCAAGTGTATTGTAATGACTTGTTTGTTTGTCGAGT
ACTTGGTTTTTGTGGGATGATTTTTTTGCGTCGTCCAGGTGTTGCCTGCT
TGCTTGTTGTTATTAGTGTCGGTTGGTGTTACTTATCTCGTTGACTATTG
TGTTCTGACCTCGTATTACGTTCTCCCATTATGTGTCCTCCGGGTAGGCT
TCGGAACACGGTTTTTGTGCATGTGCTTTCACTGTTACGTTGCCTTAAAA
CCACAAGTTTTTCAAATGGGCTGGCTCTCTGCCAGTGCGTGTTCGTTTGT
CTGTTTCTTCTTAATTACATATTTACACATGCATACATATATACTAAAGA
CCTCCTTCTCGTAATAGAATCTGGCGAAGGTGGTGGTGGTAAAAGTTACG
CGACATGTAAAGGCATGAAAGAAGCATGAATAACTACAGCAATGCCCGAC
AAAAAGCGTGTGCAGGCGTATTTGTATATACACAATTATGATACATGTAT
ATACTCATCATGTGTCAACTCTTCTATAGTACTTCGAGTTATCAGGCTTA
CTTTCCCCTCCGCCATCCATCCACTCTTTCCTCGTGTACGCGAAATATGT
CCTGTCCTGCAACTAGATTCGGTTAGTACCCTGTAGCGTGTGTGTTTGCT
GGCCATATTTTATTCAGCGCCCGTTGGTTGTTACCTAACTCGTGACCTTC
CGAACTGAGAAGCTAGATTTTTTATTACAGACACATATTCAAGCTCTTAC
CCGATGTACTATTTAGTGTCGTATCCGAGTTTTGCCTCGAACCACGTCCA
TGAAGCTTTTTGGGTAATGGCCAAAAAAGGGTTTATACAAAATATAGCAG
CAGAATAGTACCACACCGGACCGCTCGGATTGGCCAGCACCCATCATCAT
CTTTTCCTGGCCACAATTCACCCCTAGCACTCTTTCGTTCCTACGTTACT
CAGCGTTGACCCGATTTTGGCCATGATATGTTTCCGTTCAGTGGACTATT
CGAACAGACCAACCCCATCCACAAAAATAGTAAATAGACGGCGTGGATCG
CCTCTTCCCCCCAAAACCAAACCACACACTGACGACCGACCCACAAAAAA
TGATACCATGTCATCCTCCTCTCAAAATAATACAGGACACACAGGCACAC
CATCTCGCAATTTATACCCTGATAGCAACAACTACATCACCACAGCACAG
CCAAGCCACATAGACTACACATAACAAGACACAGTACACAGCGTCACCAC
ACTGTGTGACACCAACCCACGACAGCACTAGCGAAAATTGTCGAGGCCTC
TTAGCTGTAGTCGTCTACATGGCTTCCGCAAACAGCAGCAGCTCCCAGAA
ACACATATGGGAAGGCCAGACATTTCATGACACGAAATCTCTTCGAGTAT
GTGAGTGTGCAAACTTTCGGTCGGTGTTGTAGGTGATTGGTACCTGTGCT
GTAGCACATGATAGCATGTGGTAACTCCACACGATTAAACACTACACCAT
TGTTGCCGTATGTGCTTCAGCTATCGAGTGTTACATTACCAAAAAAAGTG
AGACATGCGTTAAGTTGTGCTGTACTGACTGCGATCAAATGGGTGCGAAA
CCACGGTAGTACAGATCTATAGGCAGCACAGTACTACCGTTTGTCTCCTA
CGTTGTTGGCACAGGACTCGCTTTCCTGTATGAGTCGTCGGTACTGCCTA
CTTGGTTCGGCCGAAGCGGGGTGGCGCCTACCCCGCAGAGGAATAAATAA
CTCTGTTCTGTTAAAGGAAAGGTAGATGTACTTCGGTATGGAAGCATCGG
ATAAAGGTTTTTGCCTTAGCCTTCCGGGGGTTAAGAAAAAAAAAGAAAAA
GGAGTCGTCGGTGTGTGCATTCGTGTCTACTTGTTGTATGCGGCGGGACT
GTCGAGATCTCTGGAGCCTTTTTGTAGGTGGTAAGAGGATGGCGACATGT
CAATTTTTGTGGGTCGGTTGTCAGTATGTGGTTTGGTTTTGGGGAAGAGG
CTATCCACGTCATCTGTTTAGTATTTTTGTGGGTCGGGCTGGTCTGTTCG
AATAGTCGACGGAACGGAACATCTTGTGGCCAAAATCGGGTCAACGCTGA
ATAACGTAGGAACAAAAAAAAGTGCTAAGGGTGAATTGTGCCAGGAAAAG
GTGATGATGGGTGCTGGCCAATCAGAACGGTCCGGTGTGGTACTGTTCTG
CTGCTATATTTTGTATACACCCTTTTTTGGCAAAAATCGCCAGGGTGCAC
CCTTTGGCCATTGCCCAAGCTTTTTTCTTTGCGGTGTCAGAATATCAACC
GCACGTTGTTTTCAGTTTTTACATGGTTATGACGACGAATCACTCTCAGT
TTGTCATTTTCTTTTTCTCGTTTTTTTGTACGAAATTTACTCAACCACCT
GTCTCACTGAAAAGCTAGGATAAAATTTCTATATATAGAAATGTTTTTTC
TAAGTGACCAGTCATCTCTCACCTCCCAGCTCACTATTTAGCTACCACGT
GACCGGACATCCCAGCAGAGTGTAGAAAAGTACGAACAGCAAGGCGCCTT
CAGAAAAGTCCACACCCGGAGTACCACAAGCTCGTGCACGAGGTCATGGA
TCTCACCACAATCCGGGCGAAGGTACAGCAGCAAGTGCCGTAGGTAATAC
AGTAGCGTATCCCGCCGGTCCGAATGGTTACCGCGTCTACGTGGCGGACG
AGATCAACTCAACCCGGGGTAACTCCCTAACCCTAGACCTAACCCTAACA
CAAC

Coding sequence (CDS) from alignment at H-paniculata_contig12697:2198..7551+

>mRNA_H-paniculata_contig12697.1687.1 ID=mRNA_H-paniculata_contig12697.1687.1|Name=mRNA_H-paniculata_contig12697.1687.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at H-paniculata_contig12697:2198..7551+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCATTGCGACGTGAAAACTTGGTGCAGTGGTTGCCAGGTGTGTCAACG
CTGGAAAACCGTCCACAACCGTCCGAAATTACCGGTGGGTCATATACCAC
TAACAAGACCATTCGAGCGAATTTCGATAGACTTGGTGGGGTACAAATTA
CTCTTCCTCTCCCCACCTGGGACTTGGTGCACGTATGTGCTCTCATTCAT
CGATCACCTTACTCGAATTGCACTATTAGTTCCAGTGCCGAATAAAGCAA
CAGAGACCATCGCAGCGGTAATTAATGAACATATTGGATTTTTCGAACCT
CCAGAATTTTTGTACTCCGACCAGGGTCGGGAACTTGAGAATCAAGTCGT
GTACCAACTGCAGAACGTGTTTGACTACAAGAAAGCACGCACGATCGGGT
ACTGTCCGCAGGGTAACTCTGTTTCGGAACGGAATCGCTCGACGACGCGT
GCAATGTTATCCATGTATAGCAACGTAGCTCAGGACAATTGGGCATCCCT
TTTGCCATTTTTGCAGCTAGCCCGTAATACATCTTACAGGGGCATGGAAA
CAACAGTGCACAATATCACTGGACAAGATTCGGTGGTATGTTGTTGAATG
CATTGCGACGTGAAAACTTGGTGCAGTGGTTGCCAGGTGTGTCAACGCTG
GAAAACCGTCCACAACCGTCCGAAATTACCGGTGGGTCATATACCACTAA
CAAGACCATTCGAGCGAATTTCGATAGACTTGGTGGGGTACAAATTACTC
TTCCTCTCCCCACCTGGGACTTGGTGCACGTATGTGCTCTCATTCATCGA
TCACCTTACTCGAATTGCACTATTAGTTCCAGTGCCGAATAAAGCAACAG
AGACCATCGCAGCGGTAATTAATGAACATATTGGATTTTTCGAACCTCCA
GAATTTTTGTACTCCGACCAGGGTCGGGAACTTGAGAATCAAGTCGTGTA
CCAACTGCAGAACGTGTTTGACTACAAGAAAGCACGCACGATCGGGTACT
GTCCGCAGGGTAACTCTGTTTCGGAACGGAATCGCTCGACGACGCGTGCA
ATGTTATCCATGTATAGCAACGTAGCTCAGGACAATTGGGCATCCCTTTT
GCCATTTTTGCAGCTAGCCCGTAATACATCTTACAGGGGCATGGAAACAA
CAGTGCACAATATCACTGGACAAGATTCGGTGGTATGTTGTTGA