mRNA_H-paniculata_contig1269.1685.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 629 bits (1621), Expect = 9.460e-212 Identity = 371/693 (53.54%), Postives = 440/693 (63.49%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEA----------------------GGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQ---TVVHRIDAWSPMMPPPRWNSSNGVVQWGLHQDKDIVKAPWDQEYTHAEARTHGEERRMKKCTTYTQLSLCGQLYAVVCISMLATLAVCRTRRS----GDVGCETRAADGLEATRESYSS-WRGAEMVCGDRGSTLSAAG---RSAATQNGAEKGRFFSSPSCKMQDNN---VGYLYRFPDLLKRWDDVDGDRGTWYEVMKRRMLRVEMERRREE----ERKATKAMLDEAKTAAGITARQGRVTMSGPRR----RASIMHVGESSFNVRLSCCDGETLSAVREDCVAGDVNTSPSPRRASAGTSGGXXXXXXXXXXXXXXXXX--PLLSPAQWFAREERKAIDIFLQDRELEVVVILEGIDTSTGNTVQARHSYCWEDILWNRTFASCVSRAEDGMCEVDFTKFHDTHEAPEDCIEYGFMQSYA 1941 GRWNIRRL+ AD+QKL+ DPFHS +NQ+T KII +IGLYLS+V +F+++Y IS LGCNL+L S+RE +LFSLETMTTVGYGT+DYLFG CWVMLPMLS QACIGLLIDAFLIGILFARLSRPQTRA+TVVF+K A IRRVRGEAYFMFQ+GELRKHQLLETRVRCYALRHER+ P + G+ + + A TS A+LAA++PDQVFFQ H+MRLQHPDDELGGNLLLVLPQ TVVHRIDAWSPMMPPPRWNSS+G VQWGLH DKDIVKAPW++ + E + GE R GD G +A+ SYS+ ++ E + GS L G +SA A F + S + D++ +GY++RFPDLLKRWDDVDGDRGTWYE MKRR+LRVEMERRR E ER+ T D+ + A+ + R+ +G RR ASIMHVG V C D +E G ++ + T G L+ QWFAREERKAID ++QDRELEVVVILEG DTSTG+TVQARHSYCWEDILW+RTFA CV+R EDG CEVDF+KFHDT AP +C ++GF+QSYA Sbjct: 92 GRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILRIIGLYLSLVFLFAIVYTTISHTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWVMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFMFQIGELRKHQLLETRVRCYALRHERLTYNPCGNNNNVGSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQARGTVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWEEPPSSPEHK--GERSRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEGDPASGMLRKQASSNSYSTDYQNLEQE--ELGSRLGNQGGRRQSAVYWEDASASEFGFNVSGRGTDDDTDKLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASS----RSRLAHAGFRRPLERMASIMHVGGGG--VGEDCADEFAADRSKEAPALGRLSEGRQAPQGGLETPIGSSPVVSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 774
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 255 bits (651), Expect = 4.790e-75 Identity = 136/244 (55.74%), Postives = 168/244 (68.85%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQ 732 GRWNI R K ++ L +D FH++++ TT K++ L YL +V F+LIY +IS GCN+ + RE+Y FSLETMTTVGYGT D FG CW ++ ++++QAC GLLIDA LIG+LFARL+RPQTRASTVVFS A +RR+RGE YFMFQVGELRKHQLLET+VRCYA+RH R P ++A G + A P+ V +Q HNMRLQHPDDELGG LLLVLPQ Sbjct: 16 GRWNIDRNTKDDHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRGEYYFMFQVGELRKHQLLETKVRCYAVRHHRTLP----------------IDAAGCLDD------ANPPETVHYQTHNMRLQHPDDELGGALLLVLPQ 237
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA) HSP 1 Score: 246 bits (629), Expect = 7.170e-72 Identity = 130/241 (53.94%), Postives = 166/241 (68.88%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLV 723 GRWNI R K ++KL +D FH++++ TT K++ L YL++V +F+ +Y I+R GCNL + RE+Y FSLETMTTVG+GT D FG CW ++ ++++QAC GLLIDA LIG+LFARL RPQTRASTVVFS A +RR+RGE YFMFQV ELRKHQLLET VRCYA+RH R P ++A G + S + P+ V +Q HNMRLQHPDDELGG++LLV Sbjct: 41 GRWNIGRNTKDEGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRGEYYFMFQVAELRKHQLLETHVRCYAVRHHRTLP----------------IDANGALDES------QPPETVHYQTHNMRLQHPDDELGGSMLLV 259
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: D8LEB6_ECTSI (IRK_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB6_ECTSI) HSP 1 Score: 243 bits (621), Expect = 5.040e-70 Identity = 140/264 (53.03%), Postives = 165/264 (62.50%), Query Frame = 1 Query: 1207 NNVGYLYRFPDLLKRWDDVDGDRGTWYEVMKRRMLRVEMERRREE----ERKATKAMLDEAKTAAGITARQGRVTMSG----PRRRASIMHVGESSFNVRLSCCDGETLSAVREDCVAGDVNTSPSPRRASAGTS---GGXXXXXXXXXXXXXXXXXPL--------LSPAQWFAREERKAIDIFLQDRELEVVVILEGIDTSTGNTVQARHSYCWEDILWNRTFASCVSRAEDGMCEVDFTKFHDTHEAPEDCIEYGFMQSYA 1941 +N+GY++RFPDLLKRWDDVDGDRGTWYE MKRR+LRVEMERRR E ER+ T D+ + A+ + R+ +G P R ASIM VG V C D D A +P+ R S G GG P L+ QWFAREERKAID ++QDRELEVVVILEG DTSTG+TVQARHSYCWEDILW+RTFA CV+R EDG CEVDF+KFHDT AP +C ++GF+QSYA Sbjct: 62 DNLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRLLRVEMERRRSEDMRRERERTGKTADDIRAASS----RSRLAHAGFRRPPERMASIMRVGGGG--VGEDCAD---------DFAADRSKEAPALGRLSEGRQAPQGGLETPIGSPPVLSGSGDAPAGNGGGRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 310
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI) HSP 1 Score: 229 bits (585), Expect = 5.390e-65 Identity = 114/152 (75.00%), Postives = 133/152 (87.50%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFM 456 GRWNIRRL+ AD+QKL+ DPFHS +NQ+T KII +I LYLS+V++F+++Y IS LGCNL+L S+RE +LFSLETMTTVGYGT+DYLFG CW+MLPMLS QACIGLLIDAFLIGILFARLSRPQTRA+TVVF+K A IRRVRGEAYFM Sbjct: 129 GRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILLIIALYLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRGEAYFM 280
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA) HSP 1 Score: 206 bits (525), Expect = 2.070e-55 Identity = 115/262 (43.89%), Postives = 160/262 (61.07%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLIS-RHLGCNLELNSLRESYLFSLETMTTVGYG--TNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 777 G++NI RK D +K+ DPFH+++N TS+II+G+ Y I++ F+L Y +S RH C++ L+S+ E+Y+FSLET+ T+GYG TND +G C + +L+ ++ G+++D+ IGI +AR SR RA+T++FS A IR++RG YFMFQ E RKHQL+E VR YA+RHE EE A P+ FQCH MR+Q PDD+ G LL+VLPQ VVHRID WSP+ PP Sbjct: 40 GQFNI--YRKGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFALAYLDVSVRHPTCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFMFQTCERRKHQLVEAHVRLYAVRHE------EEDD-------------------------AYEPNDFLFQCHQMRVQQPDDDCGAMLLMVLPQVVVHRIDQWSPLFPP 268
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A484DZB3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZB3_BRELC) HSP 1 Score: 205 bits (522), Expect = 8.940e-55 Identity = 113/280 (40.36%), Postives = 165/280 (58.93%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFG------------------LIGLYLSIVMIFSLIYRLIS-RHLGCNLELNSLRESYLFSLETMTTVGYG--TNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 777 GR+N+ RK + +K+ DPFH+L+N TS+I++G L+ +Y ++++F+L Y +S RH C++ L+S+ ++Y+FSLET+ T+GYG TND +G C M +L+ ++ G+++D+ IGI +AR +R RA+T++FS A IR++RG+ YFMFQ E RKHQL+E VR YA+RHE A+ A P +V FQCH MR+Q PDD+ G LL+VLPQ VVHRID WSP+ PP Sbjct: 42 GRFNV--YRKGGEWRKIYWDDPFHTLINTRTSRIVWGVSIAVSWTLLTMTLSIILLVSIYFFVILLFALAYLNVSMRHPTCHVGLSSIIDAYIFSLETIMTIGYGAPTNDIFYGGCTSMATLLTLESFAGIILDSVCIGIFYARFARANQRANTIIFSNSAVIRKIRGQYYFMFQTCERRKHQLVEAHVRLYAVRHE-------------------------------AEDDAAGPSEVMFQCHQMRVQQPDDDCGAMLLMVLPQVVVHRIDQWSPLFPP 288
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: H3GJH8_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GJH8_PHYRM) HSP 1 Score: 204 bits (519), Expect = 1.430e-54 Identity = 114/262 (43.51%), Postives = 159/262 (60.69%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLIS-RHLGCNLELNSLRESYLFSLETMTTVGYG--TNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 777 GR+NI RK D +K+ DPFH+++N TS+II+G+ Y I+ F+L Y +S RH C++ L+S+ ++Y+FSLET+ T+GYG T+D +G C + +L+ ++ G+++D+ IGI +AR SR RA+T++FS A IR++RG YFMFQ E RKHQL+E VR YA+RHE +E+ E N FQCH MRLQ PDD+ G LL+VLPQ VVHRID WSP+ PP Sbjct: 42 GRFNI--YRKGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIIFFFALAYLDVSVRHPTCHVGLSSIMDAYVFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHYYFMFQTCERRKHQLVEAHVRLYAVRHEAE----DETDESN---------------------------DFLFQCHQMRLQQPDDDCGAMLLMVLPQVVVHRIDQWSPLFPP 270
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: A0A5D6YC93_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC93_9STRA) HSP 1 Score: 204 bits (518), Expect = 5.880e-54 Identity = 114/261 (43.68%), Postives = 153/261 (58.62%), Query Frame = 1 Query: 1 GRWNIRRLRKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTN--DYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 777 GRWNIRR K+ KL DPFHS+VN SK++ L+ LYLS ++ F +Y + H C + SL + + FS+ + T+G+GTN D F C M +++S++ +G+L++A IGI+F R SR Q RA+T+V S A +RR+RGE YFMFQ E+RKHQL+E VR YA+RH DVE G + +FQ H MR+QHPDD+LGG LLL LP VVHR+DAWSP+ P Sbjct: 68 GRWNIRR-HKVESYWKLYLQDPFHSVVNMRLSKVLGTLVFLYLSTLLFFGFLYTTVPDH--CKTAIFSLYDGFSFSVSVLFTIGFGTNGGDVFFNRCGWMQTVITSESLVGMLLEAISIGIIFQRFSRAQARANTIVLSTNAVVRRIRGELYFMFQACEMRKHQLVEAHVRMYAIRH--------------------DVEFGTH---------------YYFQSHPMRIQHPDDDLGGMLLLALPSVVVHRMDAWSPLCRP 290
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Match: D0N402_PHYIT (Animal inward rectifier K channel (IRK-C) family protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=D0N402_PHYIT) HSP 1 Score: 201 bits (512), Expect = 1.050e-53 Identity = 109/254 (42.91%), Postives = 155/254 (61.02%), Query Frame = 1 Query: 25 RKLADLQKLVESDPFHSLVNQTTSKIIFGLIGLYLSIVMIFSLIYRLIS-RHLGCNLELNSLRESYLFSLETMTTVGYG--TNDYLFGHCWVMLPMLSSQACIGLLIDAFLIGILFARLSRPQTRASTVVFSKYAAIRRVRGEAYFMFQVGELRKHQLLETRVRCYALRHERMPPPPEESGEKNGAPATGDVEAGGYVGTSPADLAAKVPDQVFFQCHNMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 777 RK D +K+ DPFH+++N TS+II+G+ Y I++ F++ Y +S RH C++ L+S+ ++Y+FSLET+ T+GYG T+D +G C + +L+ ++ G+++D+ IGI +AR SR RA+T++FS A IR++RG YFMFQ E RKHQL+E VR YA+RHE A D E P+ FQCH MR+Q PDD+ G LL+VLPQ VVHRID WSP+ PP Sbjct: 38 RKGGDWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRGHFYFMFQTCERRKHQLVEAHVRLYAVRHE----------------AEDDTEE---------------PNDFLFQCHQMRVQQPDDDCGAMLLMVLPQVVVHRIDQWSPLFPP 260 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1269.1685.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1269.1685.1 >prot_H-paniculata_contig1269.1685.1 ID=prot_H-paniculata_contig1269.1685.1|Name=mRNA_H-paniculata_contig1269.1685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=602bp MIFSLIYRLISRHLGCNLELNSLRESYLFSLETMTTVGYGTNDYLFGHCWback to top mRNA from alignment at H-paniculata_contig1269:1438..24926- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1269.1685.1 ID=mRNA_H-paniculata_contig1269.1685.1|Name=mRNA_H-paniculata_contig1269.1685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=23489bp|location=Sequence derived from alignment at H-paniculata_contig1269:1438..24926- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1269:1438..24926- >mRNA_H-paniculata_contig1269.1685.1 ID=mRNA_H-paniculata_contig1269.1685.1|Name=mRNA_H-paniculata_contig1269.1685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3612bp|location=Sequence derived from alignment at H-paniculata_contig1269:1438..24926- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |