prot_H-paniculata_contig8709.16643.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8709.16643.1
Unique Nameprot_H-paniculata_contig8709.16643.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length68
Homology
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BLAST of mRNA_H-paniculata_contig8709.16643.1 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 7.170e-10
Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 0 
Query:    6 EDNLNKRKKGGGAVAGA--GAEGGAADGDEGVKRQRRAGFEGKKQDFINKEKPSRSFGKDAGGRG 68
            E+NLN+RKKGG AV      A GG A   +G KRQRRAGFEGKKQDFINKE+PS++ G+  GG G
Sbjct:  488 EENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKA-GEQGGGGG 551
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8709.16643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWI2_ECTSI7.170e-1063.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8709contigH-paniculata_contig8709:7823..8949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8709.16643.1mRNA_H-paniculata_contig8709.16643.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8709 7823..8951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8709.16643.1 ID=prot_H-paniculata_contig8709.16643.1|Name=mRNA_H-paniculata_contig8709.16643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=68bp
RQAKREDNLNKRKKGGGAVAGAGAEGGAADGDEGVKRQRRAGFEGKKQDF
INKEKPSRSFGKDAGGRG
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