prot_H-paniculata_contig8625.16586.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8625.16586.1
Unique Nameprot_H-paniculata_contig8625.16586.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length319
Homology
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: D8LJ66_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ66_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 1.390e-80
Identity = 185/308 (60.06%), Postives = 222/308 (72.08%), Query Frame = 0
Query:   13 LAERETRLKKMLEDKMKALSRQKEGVDGGRSVNEEEGAEREEE-VARIKRELFTVQVLRLQQACRRQALEISREEASKPFGGVALLEWQSFVRTKTQSLREARFIAVEKEKKRQAYFRDEAKRRRYQSYLKAIVIHRNEFSNFHRTRRLVVTRLARSCVSRTEDVAAKEKREQDRAERKRIQENRNTTQXXXXXXXXXXXXXXXHNGDRGNPDNGAGXXXXXXXXXXXXXXXXXXKMGSSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            L ERETRLK+ LE   +A++             +EEG +     +A  +RELFT+QVLRLQ++CR+QA++ISRE + KP    ALL+W SF RT+ QS RE +    E+EK+RQA F++EAKRRRYQSYLKAI+ HR EFSNFHR RRL V+++AR+CVS TED AA+EKRE+ RAERKRIQE         XX               G       XXXXXXXXXXXXXXXXXX  G ++YF++AHSKSE VRQP +LKGG LKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQ+IAL++YLME
Sbjct:  232 LTERETRLKQELEKDGQAVA----------GAGDEEGRKAAAAALAARQRELFTIQVLRLQRSCRKQAVDISREISRKPLAAGALLDWHSFYRTRAQSQREVK--VAEREKRRQAIFKEEAKRRRYQSYLKAILGHRLEFSNFHRGRRLTVSKMARACVSHTEDQAAREKREEGRAERKRIQEGAAAAPDGGXXKSAESEEAGAEKAAEGEE---GXXXXXXXXXXXXXXXXXXXXXGGNDYFRKAHSKSEAVRQPSSLKGGTLKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQTIALLSYLME 524          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A7S0ITH5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITH5_9EUKA)

HSP 1 Score: 112 bits (279), Expect = 9.790e-24
Identity = 79/218 (36.24%), Postives = 112/218 (51.38%), Query Frame = 0
Query:  121 EKKRQAYFRDEAKRRRYQSYLKAIVIHRNEFSNFHRTRRLVVTRLARSCVSRTEDVAAKEKREQDRAERKRIQ-----------------ENRNTTQXXXXXXXXXXXXXXXHNGDRGNPDNGAGXXXXXXXXXXXXXXXXXXKMGS--SNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            E+KRQ       KRRR   +L  ++ H  EF +FHR  R    +LA+S ++  +  A KE +E++RA+R+R++                 +N   T+                   +G      G                     +  S+Y++ AH+  E + QP  L+GG LKEYQLQGL+WMVSL+NNNLNGILADEMGLGKTIQ+IAL+ +L+E
Sbjct:  143 ERKRQIDLEARRKRRR-DEFLSRLLAHSTEFKDFHREARKTGAKLAKSVLANFDSKARKETKERERAQRERLRALRENNIDEYMQLIADTKNERITKLLDETDRYLRELGAKVQEQKGEVAGAVGVAATEPQSVPPLEPSDSFGTSAERSSYYKLAHAVDEGIEQPRMLRGGQLKEYQLQGLRWMVSLHNNNLNGILADEMGLGKTIQTIALLTFLVE 359          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A7S3LF86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF86_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.560e-23
Identity = 54/71 (76.06%), Postives = 60/71 (84.51%), Query Frame = 0
Query:  249 GSSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            G+S+Y+  AH  SE VRQP  L GG LKEYQL GLQWM+SLYNN LNGILADEMGLGKTIQ+I+LIAYLME
Sbjct:    9 GTSSYYASAHVHSEEVRQPSILVGGDLKEYQLMGLQWMISLYNNRLNGILADEMGLGKTIQAISLIAYLME 79          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A7S2PEE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PEE8_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.680e-23
Identity = 73/188 (38.83%), Postives = 99/188 (52.66%), Query Frame = 0
Query:  137 YQSYLKAIVIHRNEFSNFHRTRRLVVTRLARSCVSRTEDVAAKEKREQDRAERKRI-----QENRNTTQXXXXXXXXXXXXXXXHNGDRGNPDNGAGXXXXXXXXXXXXXXXXXXKMGSSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            ++ +LKAIV H+++F  FHR +R  V++LAR+     +    +++R  +  ER R+      + R  +                   D  N    +                   +    +YF  AH K E VRQP  L GG LKEYQ+ GLQW+VSLYNN LNGILADEMGLGKTIQ+IAL++YLME
Sbjct:  148 HKEFLKAIVSHQSDFIRFHRIKRAEVSKLARAVRDHIDRKEKQKERNAELVERDRLAALKANDMRAYSALLEETKNERLKFLLSKTDDYIN--QVSALLSEQRAEETGYDTAMDRRSSEGSYFLSAHVKKEQVRQPSILVGGDLKEYQISGLQWLVSLYNNRLNGILADEMGLGKTIQTIALLSYLME 333          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: K0S5V7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5V7_THAOC)

HSP 1 Score: 109 bits (272), Expect = 1.130e-22
Identity = 80/200 (40.00%), Postives = 104/200 (52.00%), Query Frame = 0
Query:  135 RRYQSYLKAIVIHRNEFSNFHRTRRLVVTRLARSCVSRTEDVAAKEKREQDRAERKRIQENR-NTTQXXXXXXXXXXXXXXXHNGDRGNPDNGAGXXXXXXXXXXXXXXXXXXKMGSS--------------NYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            RR++  LKAIV H+ EF  FHR +R    +LAR      +   A ++++ ++AE+ R+   R N                  +  D+   D                      KMG+               +Y++ AH +SE VRQP  L GG LKEYQL GLQWMVSLYNN LNGILADEMGLGKTIQ+I+LIAYL+E
Sbjct: 1219 RRHKDLLKAIVSHQTEFYKFHRLKRNDAAKLARVVQMTLKKTEALKEKDAEQAEKARLAALRSNDMTAYTSLLNDTKNDRLKYLLDK--TDECMNQISTLLASRVAEEEEDIKKMGAEGTIEASFSETATGGSYYETAHVRSEEVRQPSILTGGDLKEYQLGGLQWMVSLYNNRLNGILADEMGLGKTIQTISLIAYLIE 1416          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A1Z5JDW2_FISSO (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDW2_FISSO)

HSP 1 Score: 108 bits (271), Expect = 1.440e-22
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0
Query:  252 NYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            +Y+  AHSK+E VRQP  L GG LKEYQL GLQWMVSLYNN LNGILADEMGLGKT+Q+IAL+AYLME
Sbjct:  613 SYYATAHSKTEEVRQPSILAGGDLKEYQLAGLQWMVSLYNNKLNGILADEMGLGKTVQAIALLAYLME 680          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A1E7FBQ6_9STRA (SNF2_N-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBQ6_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.310e-22
Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 0
Query:  249 GSSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            G+++Y+  AH K E ++QP  L GG LKEYQ+ GLQWMVSLYNN LNGILADEMGLGKTIQ+IALIAYLME
Sbjct:   49 GTASYYASAHMKQEEIQQPSLLVGGDLKEYQMSGLQWMVSLYNNKLNGILADEMGLGKTIQAIALIAYLME 119          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: T2MFA5_HYDVU (Transcription activator BRG1 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MFA5_HYDVU)

HSP 1 Score: 108 bits (269), Expect = 2.640e-22
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 0
Query:  248 MGSSNYFQRAHSKSETVR-QPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            + S NY+  AHS SE +  QP +L GG+LKEYQL+GL+WMVSLYNNNLNGILADEMGLGKTIQ+IALIAYL+E
Sbjct:  571 LDSRNYYNLAHSTSEIIHEQPKSLCGGVLKEYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALIAYLVE 643          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A7S2YJA2_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJA2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.670e-22
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0
Query:  250 SSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            +S+Y+  AH K+E VRQP  L GG LKEYQL GLQWM+SLYNN LNGILADEMGLGKTIQ+I+LIAYLME
Sbjct:  720 ASSYYATAHMKTEEVRQPSILVGGDLKEYQLTGLQWMISLYNNKLNGILADEMGLGKTIQAISLIAYLME 789          
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Match: A0A812YMD2_SYMMI (Snf22 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YMD2_SYMMI)

HSP 1 Score: 100 bits (250), Expect = 9.250e-22
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 0
Query:  250 SSNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILADEMGLGKTIQSIALIAYLME 319
            +  Y+Q  H  SE + QP  L GG LKEYQL GLQW+VSLYNN LNGILADEMGLGKTIQ++AL+AY+ME
Sbjct:   67 AKEYYQETHRHSEKIVQPRMLHGGDLKEYQLAGLQWLVSLYNNRLNGILADEMGLGKTIQALALLAYIME 136          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8625.16586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ66_ECTSI1.390e-8060.06Helicase ATP-binding domain-containing protein n=1... [more]
A0A7S0ITH5_9EUKA9.790e-2436.24Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3LF86_9STRA1.560e-2376.06Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2PEE8_9STRA3.680e-2338.83Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
K0S5V7_THAOC1.130e-2240.00Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A1Z5JDW2_FISSO1.440e-2277.94SWI/SNF-related matrix-associated actin-dependent ... [more]
A0A1E7FBQ6_9STRA2.310e-2273.24SNF2_N-domain-containing protein (Fragment) n=1 Ta... [more]
T2MFA5_HYDVU2.640e-2273.97Transcription activator BRG1 n=1 Tax=Hydra vulgari... [more]
A0A7S2YJA2_9STRA2.670e-2275.71Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A812YMD2_SYMMI9.250e-2268.57Snf22 protein n=1 Tax=Symbiodinium microadriaticum... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 14..34
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availablePANTHERPTHR10799:SF854ATP-DEPENDENT HELICASE BRMcoord: 38..319
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 38..319
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 287..315
e-value: 2.7E-8
score: 32.9
IPR014012Helicase/SANT-associated domainPFAMPF07529HSAcoord: 134..194
e-value: 4.5E-6
score: 26.9
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 242..319
e-value: 9.9E-24
score: 85.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 263..318

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8625contigH-paniculata_contig8625:799..9848 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8625.16586.1mRNA_H-paniculata_contig8625.16586.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8625 799..9848 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8625.16586.1 ID=prot_H-paniculata_contig8625.16586.1|Name=mRNA_H-paniculata_contig8625.16586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
MNESSNISISGSLAERETRLKKMLEDKMKALSRQKEGVDGGRSVNEEEGA
EREEEVARIKRELFTVQVLRLQQACRRQALEISREEASKPFGGVALLEWQ
SFVRTKTQSLREARFIAVEKEKKRQAYFRDEAKRRRYQSYLKAIVIHRNE
FSNFHRTRRLVVTRLARSCVSRTEDVAAKEKREQDRAERKRIQENRNTTQ
KSAAAAATVAATANGHNGDRGNPDNGAGDGGGGAEETGGNSNKSKKKMGS
SNYFQRAHSKSETVRQPVALKGGILKEYQLQGLQWMVSLYNNNLNGILAD
EMGLGKTIQSIALIAYLME
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR014012HSA_dom
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase