prot_H-paniculata_contig861.16573.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig861.16573.1
Unique Nameprot_H-paniculata_contig861.16573.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length316
Homology
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BLAST of mRNA_H-paniculata_contig861.16573.1 vs. uniprot
Match: A0A6H5JSP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP6_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.170e-56
Identity = 114/237 (48.10%), Postives = 155/237 (65.40%), Query Frame = 0 
Query:   59 PRSIPLLLSHSIHGLSVGLPARVRTISSVLHGDGELCTDVSRRTHVRRRHALRAMGGSIRWFGGQSVVPWELALFLVEEMKGEGISPGAVVYTAALAECKWAGETRHVEYLLSQLRSAGLDIAPAIPGALNDEPPPSQIPAIY-----------------------KSTSSAGSEAQLTGAGRTAEAALSTVEGMWAAAAGGDSKYEPTPATSRAALNACAAGGQWERALALVRDAA 272
            PR+ P++  HS        P +  + +++ H   +    ++R   + +R +  ++G SIR FGGQSVVPWELALFLV+EMKGE + PGAVVYTAALAEC+WAGE RHV+Y+L ++++ GL+I P IPGA ND+PPPSQ P ++                       +  ++A    ++  A RTAEAAL+TVE MWA A     +++P+PAT RAAL+ACAAGGQWERAL+LVRDAA
Sbjct:   88 PRNRPVVCDHS--------PGQ--SPAALAHSFYDAAAGMTRSGRIGQRCSTASVG-SIRKFGGQSVVPWELALFLVDEMKGEMVQPGAVVYTAALAECRWAGEQRHVDYILKEMKAEGLNIVPGIPGATNDDPPPSQSPPLFGKLPEPPPNSATPQHQPGTGGPDQHAAAAAVVEKMQEAARTAEAALATVETMWARA-----QHDPSPATCRAALDACAAGGQWERALSLVRDAA 308
[Close]
BLAST of mRNA_H-paniculata_contig861.16573.1 vs. uniprot
Match: D7FTJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ1_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 2.050e-45
Identity = 99/210 (47.14%), Postives = 129/210 (61.43%), Query Frame = 0 
Query:   85 SSVLHGDGELCTDVSRRTHVRRRHALRAMGGSIRWFGGQSVVPWELALFLVEEMKGEGISPGAVVYTAALAECKWAGETRHVEYLLSQLRSAGLDIAPAIPGALNDEPPPSQIPAIYKSTSSAGSEA----------------------QLTGAGRTAEAALSTVEGMWAAAAGGDSKYEPTPATSRAALNACAAGGQWERALALVRDAA 272
            +++ H   +    ++R   + RR ++ ++  SIR FGGQSVVPWELALFLVEEMKGE + PGAVVYTAALAEC+WAGE RHV+Y+L ++++ GL+I P IPGA +                                            ++  A R AEAAL+TVE MWA A     +++P+PAT RAAL+ACAAGGQWERAL+LVRDAA
Sbjct:   11 AALAHSFYDAAAGMTRSGRIGRRCSIASVD-SIRSFGGQSVVPWELALFLVEEMKGEMVQPGAVVYTAALAECRWAGEQRHVDYILEEMKAEGLNIVPGIPGATDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKMQEAARAAEAALATVETMWARA-----QHDPSPATCRAALDACAAGGQWERALSLVRDAA 214
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig861.16573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSP6_9PHAE2.170e-5648.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTJ1_ECTSI2.050e-4547.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig861contigH-paniculata_contig861:23108..26631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig861.16573.1mRNA_H-paniculata_contig861.16573.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig861 22665..26895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig861.16573.1 ID=prot_H-paniculata_contig861.16573.1|Name=mRNA_H-paniculata_contig861.16573.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
MCTTAANFPRTLLGRLQLLPRRLSSSTTTLTNNLNVNTKCTRPSFFPKQA
LVSGQSPRPRSIPLLLSHSIHGLSVGLPARVRTISSVLHGDGELCTDVSR
RTHVRRRHALRAMGGSIRWFGGQSVVPWELALFLVEEMKGEGISPGAVVY
TAALAECKWAGETRHVEYLLSQLRSAGLDIAPAIPGALNDEPPPSQIPAI
YKSTSSAGSEAQLTGAGRTAEAALSTVEGMWAAAAGGDSKYEPTPATSRA
ALNACAAGGQWERALALVRDAALDDDDGSLNDRSRVAEQVEALALGGQWL
EALALVKGKGDLTNS*
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