mRNA_H-paniculata_contig8443.16441.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig8443.16441.1
Unique NamemRNA_H-paniculata_contig8443.16441.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: D8LP16_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP16_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 7.760e-93
Identity = 217/536 (40.49%), Postives = 294/536 (54.85%), Query Frame = 2
Query:    8 RYQDKFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDDQSCVSISTSGSNFDQIADSLFYDSQDTPSWPPKTTAGEATASGSESFHQSEPSISQLFSS--VTTSMDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYMKKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLSADSSTLLALGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRKGPWAGTVMALSLNVGLFAGSLTSFLVL 1609
            RYQ+++ L  RI+GSL VS   FV C + VLAEG++   LF  TM LI++SGL  AVLQGG FAM SAFPPRYTQAM+AGQ LAGL VAL  +FT+L   DD+SC+        +D IA     D  DT       T G       ++ +Q    +  L  S     + D+ T    GIAV+VLLGCI+TY +L RLP  +FY+       GDG       D+G ++   RVR+         GN     G   DD G  LG    ++ S+         +R+L  +PL                 S   +   EGER  +    S  +      +G+    +          ++ +  PIS Y+F+VF  F V++S++P   S+IVS+Q C +GR+RFF  D F++FSFVS+NA D LGRL AG      +    P  WLP A+V+R++FVPL+LACR+  S+          DW+S +D++PLT++P+F FTNG++ SLSMM GS+ G WAGT M L L+ GL AGSL SFLVL
Sbjct:   71 RYQEQWDLTGRIMGSLAVSLGTFVACGIFVLAEGVNGTLLFFCTMGLIVVSGLCTAVLQGGIFAMASAFPPRYTQAMMAGQGLAGLAVALAGLFTTLAGPDDESCIV-----DLYDTIA--TVRDGGDTGGSADVLTEGHLAR---QATYQRASDVDPLLGSSCAAYARDWSTFVYFGIAVMVLLGCILTYPLLRRLPFASFYINTAVGL-GDG------CDEGGVSV-GRVRE---------GNPD---GGGADDDGW-LGVGRSAVTSTTTSPTGSSMYRRLVDKPL-----------------SDCTMHDAEGERDGAQKRESATIVNGGSYVGSDTPVDG---------LRSRLAPISSYAFAVFLVFTVTLSIFPGATSDIVSSQRCQSGRSRFFAGDVFVMFSFVSFNAFDLLGRLVAG------LAVALPYAWLPTASVSRLMFVPLMLACRSEHSR--------FRDWLS-ADVFPLTLMPVFAFTNGYVGSLSMMAGSQLGAWAGTAMVLFLSGGLLAGSLLSFLVL 534          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: W7TF57_9STRA (Equilibrative nucleoside transporter 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF57_9STRA)

HSP 1 Score: 122 bits (307), Expect = 7.630e-26
Identity = 163/564 (28.90%), Postives = 230/564 (40.78%), Query Frame = 2
Query:   20 KFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDDQSCVSISTSGSNFDQIADSLFYDSQDTPSWPPKTTAGEATASGSESFHQSEPSISQLFSSVTTSMDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYM-----------------KKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLS-ADSSTLLALGEGERKRSMSNP-SIVVGRTDFVLGAANVN-ESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA------AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSFLVLAVN 1618
            K S+  RI+  L +    F    +LVL +  S + +F  T + + + G   +VLQ   F   +AFPPRYTQAM+AGQ LAGL+VA   + T+     + +C  +  +     Q                     GE  A+                 S    +D+  LA  G AV++L  CIV++  LERLPL  F++                  K T   G   S +GK D   +     +R      R  AG             G     ASD   SS+   G               LPNT+     LLS  DSS  L    GE +R   N  S   G T      ++V    H+S  +  R  G          +VF  F ++++++P+    IVS + C  GR  F+ Q  F+ F F+ +N  D+ GR         T+ G  P  +L  A      A  RVVF+PL L C    S      I +  DW      +P+  +  F  +NG+L SL+MM G  +         G VM L +  GL AGS+ SFLV AV+
Sbjct:   48 KCSITFRIVLPLALLLSIFAATAVLVLVKDASRDGMFSFTALSVALCGFCTSVLQAAIFGYAAAFPPRYTQAMMAGQGLAGLIVAAAGLATAASSRANGACAGVHLTEEGPGQ---------------------GEQMAA----------------CSAYQEIDYHALAYFGTAVVILGVCIVSFLYLERLPLAQFFVGYNKRHVHSPRGAAGGGSKATLGLGGNRSGSGKGDDASVVESG-LRALPMAVRSGAGGEGAADKEAVGVDGEQGEEASDEE-SSVGLVG--------------VLPNTDPCA--LLSRVDSSLSLLSAHGEDERGDGNEESESWGNTTLHDIKSSVRTHQHVSFLVLLRRLGS------PGLAVFLVFSITLALFPSTTVHIVSVRRCQ-GRGVFYDQ-AFVPFQFLLFNLGDWGGR---------TLAGHLPSPFLVPAHRLSFYAAARVVFLPLFLLCNVDDSAF---PIVFAADW------WPMLFMLFFSLSNGYLSSLAMMRGPAQLTVDQAERGGNVMVLLMTAGLSAGSVLSFLVSAVS 530          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8B6XKA7_HYDVU (equilibrative nucleoside transporter 1-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XKA7_HYDVU)

HSP 1 Score: 90.1 bits (222), Expect = 1.930e-15
Identity = 67/203 (33.00%), Postives = 102/203 (50.25%), Query Frame = 2
Query: 1019 NVNESHLSRRLTRR---VKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFI-LFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGG-----SRKGPWAGTVMALSLNVGLFAGSLTSF 1600
            NV +S  S  + ++       FK I    FSV   F V++S++PAV+S+IVST    + R   F  D F  L  F  +N  +  GR+ +G   +    G     WLP+   +R++F+PL L C   +   L+   ++        D +P+ I  LF F++G+L SL MM G     ++    AGT+M+  L  GL AG+L SF
Sbjct:  250 NVKQSEYSANILKKKIPYYAIFKQIMPLGFSVSAVFCVTLSLFPAVVSKIVSTNKSNSSR---FANDLFSSLVCFFIFNCGNLAGRIASGFYQIVNEKG----PWLPLLCFSRILFIPLFLMCHFKNGSILLYVFKY--------DYWPVIINCLFAFSHGYLGSLCMMFGPKLVSAKYSETAGTIMSCFLTTGLTAGALLSF 437          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: T2M747_HYDVU (Equilibrative nucleoside transporter 1 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M747_HYDVU)

HSP 1 Score: 85.1 bits (209), Expect = 8.240e-14
Identity = 62/182 (34.07%), Postives = 87/182 (47.80%), Query Frame = 2
Query: 1073 FKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILF-SFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSF 1600
            FK I   + SV   F V++S++PAV+S IVS       R   F  D F  F  F  +N  D  GR+ AG   +    G     WLP+   +R++F+PL L C   +   L    +        +D +P+ I  LF  +NG+L SL MM G +         AGT+M+  L  GL AG+  SF
Sbjct:  274 FKQILPLAISVSVVFCVTLSLFPAVVSRIVSVDKSKTSR---FTNDLFSTFVCFFIFNCGDLAGRIAAGSYQIVAERG----PWLPILCFSRILFIPLFLMCHFENGSPLTYIFK--------NDYWPIIINSLFALSNGYLGSLCMMFGPKLVSAEYSETAGTMMSFFLTAGLTAGACLSF 440          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8I6A1R8_RAT (Equilibrative nucleoside transporter 1 n=1 Tax=Rattus norvegicus TaxID=10116 RepID=A0A8I6A1R8_RAT)

HSP 1 Score: 82.4 bits (202), Expect = 6.100e-13
Identity = 72/231 (31.17%), Postives = 107/231 (46.32%), Query Frame = 2
Query:  938 LGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSFLVLAV 1615
            + EGE  R     S V G        AN N+S         +K   K I   + SV F F V+I ++PAV +E+ S+    AG + +       +  F+++N  D+LGR     T +C   G     WLPV    RVVF+PLL+ C       L    +         D++ +T +  F F+NG+L SL M  G +K        AG +M+  L +GL  G++ SFL+ A+
Sbjct:  240 ISEGEEPRGGREESGVPGPNSL---PANRNQS---------IKAILKSIWVLALSVCFIFTVTIGLFPAVTAEVESS---IAGTSPWKNCYFIPVACFLNFNVFDWLGR---SLTAICMWPG-QDSRWLPVLVACRVVFIPLLMLCNVKQHHYLPSLFK--------HDVWFITFMAAFAFSNGYLASLCMCFGPKKVKPAEAETAGNIMSFFLCLGLALGAVLSFLLRAL 443          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A4V1J034_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4V1J034_ROZAC)

HSP 1 Score: 78.6 bits (192), Expect = 8.900e-12
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2
Query:    5 SRYQDKFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDD 313
            ++   KFSL  R++  L ++ F F++  +L   +  + +S F  TM  IL+ G+S  +LQ G F +   FPP YTQA++ GQ +AGLVV L AIFT+L+ S+D
Sbjct:   72 TKVDHKFSLPVRVVSGLVMNGFVFLLSTMLTAFDSFAPDSFFFITMGSILLCGISTGILQKGLFGLAGEFPPIYTQAIMNGQGIAGLVVTLSAIFTTLLSSND 174          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A0D2WM26_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WM26_CAPO3)

HSP 1 Score: 77.4 bits (189), Expect = 4.580e-11
Identity = 95/383 (24.80%), Postives = 158/383 (41.25%), Query Frame = 2
Query:  470 SISQLFSSVTTS-MDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYMKKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLSADSSTLLALGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSF 1600
            S++ +FS+V +S      +A   ++V+V+LGC++ + +L RLP+  FYM     E  D         + +L R  + R          G+  + S +   D+       S  + SS+   GP+      P  P P+  +T S     LS     +     G    S     I V R+ F  G                    +K I   + +V + F V++S++P++ S I S    +     FF      +  F+ +N  D+ GR+ A      +    +   W+P+    R +F+P  + C  + ++          D +  SD +P  ++ LF  TNG+  SL MM    K        AGT+M   L++GL  GSL SF
Sbjct:  373 SLASIFSTVGSSNQQVSAIAYFTVSVVVILGCLIGFFVLLRLPVYKFYM-----EVADHHKAVQSQSRINLLRDKQQRYGSG-----EGSSPLLSPSRLSDN-----MLSSPLDSSVIVNGPMGGSSPAPPSPTPSTYSTTSPTKMRLS-----MFRRRNGSNHDSERGSQITVARS-FDFGDV------------------WKRIWPLALAVGYNFFVTLSVFPSITSSINSYTAASDPDNYFFNNLFTAVSCFLFFNLGDYFGRILASWFAFPS----AKYVWIPILL--RTIFIPFFMLCNISGTR---------LDVVFTSDAWPFILMALFATTNGYFGSLCMMYAPNKVEVHEKEIAGTMMVFCLSLGLSLGSLISF 701          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A364L445_9EURO (Uncharacterized protein n=3 Tax=Eurotiales TaxID=5042 RepID=A0A364L445_9EURO)

HSP 1 Score: 74.3 bits (181), Expect = 2.780e-10
Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 2
Query: 1100 SVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA----AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPL-FGFTNGFLVSLSMMGGSR-----KGPWAGTVMALSLNVGLFAGSLTSFL 1603
            +V+ CF V++ +YP    ++ S     A R+R F  + FI  +F+ +N  D +GR++        V  ++  T  P A    +V+R+VF+PL LAC   S    + N          SD + L +V L FG TNGFL S  MMG  +     +   AG  M++ L  GL  GSL SF+
Sbjct:  319 AVYLCFTVTM-IYPVFTVKVQSVHNDPATRSRIFEPELFIPLAFLFWNMGDLIGRMSP------IVPALARTTNYPRALFAFSVSRLVFIPLYLACNVRSGGVTLVN----------SDFFYLFVVQLGFGLTNGFLGSACMMGAGQYVTADEREAAGGFMSMMLIAGLATGSLLSFV 479          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8K1FF02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF02_PYTOL)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-9
Identity = 54/184 (29.35%), Postives = 95/184 (51.63%), Query Frame = 2
Query: 1082 ISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMM------GGSRKGPWAGTVMALSLNVGLFAGSLTSFLVLAV 1615
            I  Y  +VF  F+V++S++P ++S + ST      R R FG D F+   F+  NA DF+GR  A      T      E  L  + + R++F PL++ C   +     ++++ +   +  +D  P+  + +  FTNG + + ++M        +R+    GTVM   L++GL +GSL SF+ +A+
Sbjct:  273 IRYYGAAVFLVFMVTLSLFPGLVSLLHSTN---PSRGRLFG-DLFVPALFILVNAGDFVGRWVA------TSWPTPTEQRLFYSTLARLIFCPLIMFCNLQN-----EHLQPITLVLFKNDFIPILGIAICSFTNGLICTQALMLYPRALTTAREKEMGGTVMFFLLSLGLSSGSLLSFVFIAM 441          
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8C4RAE1_EPTBU (Solute carrier family 29 member 3 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RAE1_EPTBU)

HSP 1 Score: 70.5 bits (171), Expect = 4.060e-9
Identity = 58/177 (32.77%), Postives = 83/177 (46.89%), Query Frame = 2
Query: 1097 FSVFFCFLVSISMYPAVISEIVSTQGCTAGR--ARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA-AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRKGP-----WAGTVMALSLNVGLFAGSLTSFL 1603
            F VF+CF +SIS++PAV++ I  T     G    ++F      +  F+ YN SD +GR  AG      V   SP + L +A  + R  F+PL L C          N+         SD++P+ I    G +NG+L SL++  G +  P       G  M + L  GL  GSL S L
Sbjct:  279 FCVFYCFFISISLFPAVLANIEPTSSRLKGSWLTKYFTP----VCIFLLYNVSDLVGRTVAG-----WVQWPSPHSRLLLALTLLRTGFIPLTLICHFDPRNHFSANLL-------SSDVFPIFIASTLGLSNGYLGSLALEYGPKVVPPELTEATGVAMMVFLTSGLATGSLFSVL 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP16_ECTSI7.760e-9340.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TF57_9STRA7.630e-2628.90Equilibrative nucleoside transporter 1 n=3 Tax=Mon... [more]
A0A8B6XKA7_HYDVU1.930e-1533.00equilibrative nucleoside transporter 1-like n=1 Ta... [more]
T2M747_HYDVU8.240e-1434.07Equilibrative nucleoside transporter 1 n=1 Tax=Hyd... [more]
A0A8I6A1R8_RAT6.100e-1331.17Equilibrative nucleoside transporter 1 n=1 Tax=Rat... [more]
A0A4V1J034_ROZAC8.900e-1241.75Uncharacterized protein n=1 Tax=Rozella allomycis ... [more]
A0A0D2WM26_CAPO34.580e-1124.80Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
A0A364L445_9EURO2.780e-1033.71Uncharacterized protein n=3 Tax=Eurotiales TaxID=5... [more]
A0A8K1FF02_PYTOL1.310e-929.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8C4RAE1_EPTBU4.060e-932.77Solute carrier family 29 member 3 n=2 Tax=Eptatret... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8443contigH-paniculata_contig8443:436..2813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score272.7
Seed ortholog evalue3.4e-70
Seed eggNOG ortholog2880.D8LP16
Preferred nameSLC29A1
KEGG koko:K15014,ko:K17544
KEGG TC2.A.57.1
Hectar predicted targeting categorychloroplast
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001666,GO:0001678,GO:0003008,GO:0003674,GO:0005215,GO:0005337,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005887,GO:0006139,GO:0006725,GO:0006807,GO:0006810,GO:0006863,GO:0006950,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007275,GO:0007589,GO:0007595,GO:0007610,GO:0007611,GO:0007612,GO:0008150,GO:0008152,GO:0008283,GO:0008306,GO:0009628,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010959,GO:0012505,GO:0015205,GO:0015851,GO:0015853,GO:0015854,GO:0015855,GO:0015858,GO:0015862,GO:0015864,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016323,GO:0016324,GO:0019725,GO:0022857,GO:0023052,GO:0030431,GO:0030879,GO:0031090,GO:0031224,GO:0031226,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0033500,GO:0033554,GO:0034257,GO:0034258,GO:0034284,GO:0034641,GO:0035344,GO:0035364,GO:0036293,GO:0036294,GO:0042221,GO:0042391,GO:0042592,GO:0042593,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0043271,GO:0043434,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045177,GO:0046483,GO:0046903,GO:0048513,GO:0048519,GO:0048731,GO:0048732,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050877,GO:0050878,GO:0050890,GO:0050896,GO:0051049,GO:0051051,GO:0051179,GO:0051234,GO:0051716,GO:0051924,GO:0051926,GO:0055082,GO:0055085,GO:0060078,GO:0060079,GO:0065007,GO:0065008,GO:0070013,GO:0070482,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071331,GO:0071333,GO:0071375,GO:0071417,GO:0071453,GO:0071456,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0090279,GO:0090281,GO:0097708,GO:0098588,GO:0098590,GO:0098805,GO:0098852,GO:0098916,GO:0099536,GO:0099537,GO:0099565,GO:1901264,GO:1901360,GO:1901505,GO:1901642,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1905114
EggNOG free text desc.nucleoside transmembrane transporter activity
EggNOG OGsKOG1479@1,KOG1479@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01001,ko02000
Exons2
Model size1950
Cds size1485
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8443.16441.1prot_H-paniculata_contig8443.16441.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig8443 575..2487 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931060.7263808-UTR-H-paniculata_contig8443:435..5741622931060.7263808-UTR-H-paniculata_contig8443:435..574Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8443 436..574 +
1691481571.9060786-UTR-H-paniculata_contig8443:435..5741691481571.9060786-UTR-H-paniculata_contig8443:435..574Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8443 436..574 +
1622931060.768255-UTR-H-paniculata_contig8443:2487..28131622931060.768255-UTR-H-paniculata_contig8443:2487..2813Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8443 2488..2813 +
1691481571.942204-UTR-H-paniculata_contig8443:2487..28131691481571.942204-UTR-H-paniculata_contig8443:2487..2813Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig8443 2488..2813 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931060.7413619-CDS-H-paniculata_contig8443:574..6191622931060.7413619-CDS-H-paniculata_contig8443:574..619Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8443 575..619 +
1691481571.917668-CDS-H-paniculata_contig8443:574..6191691481571.917668-CDS-H-paniculata_contig8443:574..619Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8443 575..619 +
1622931060.755686-CDS-H-paniculata_contig8443:1047..24871622931060.755686-CDS-H-paniculata_contig8443:1047..2487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8443 1048..2487 +
1691481571.9336874-CDS-H-paniculata_contig8443:1047..24871691481571.9336874-CDS-H-paniculata_contig8443:1047..2487Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig8443 1048..2487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig8443.16441.1

>prot_H-paniculata_contig8443.16441.1 ID=prot_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp
MVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIF
TSLIDSDDQSCVSISTSGSNFDQIADSLFYDSQDTPSWPPKTTAGEATAS
GSESFHQSEPSISQLFSSVTTSMDFMTLAQNGIAVLVLLGCIVTYRILER
LPLTTFYMKKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNG
QVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTE
SLRNPLLSADSSTLLALGEGERKRSMSNPSIVVGRTDFVLGAANVNESHL
SRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGR
ARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAV
TRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNG
FLVSLSMMGGSRKGPWAGTVMALSLNVGLFAGSLTSFLVLAVNG*
back to top

mRNA from alignment at H-paniculata_contig8443:436..2813+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig8443.16441.1 ID=mRNA_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2378bp|location=Sequence derived from alignment at H-paniculata_contig8443:436..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTCTCCAGATACCAAGATAAGTTCAGCCTCCGAAGACGCATTCTAGGAT CTTTGGGGGTATCTGCATTTGCGTTCGTTGTGTGCGTTCTCTTGGTCCTG GCGGAAGGGTTGAGTTCCAACTCCCTGTTTTTGGCAACGATGGTTTTGAT ATTGATATCTGGCTTATCAATTGCAGTTTTACAGGCGAGTGAACCGCGAT GAAGGGGACTTCAAATTGCTGTCATCTGTTATTTAGAGAATTTGACCACG TTTTTGATGACGTATTTACAGTCATACGAATTGAGGTAACTGTGCCACCT CCGACGGGGAAATGTTTTGAGATCTATATCTTCCCGAGATGTGTATGAAT ACTCTGGCTATCGGTAGTTTTTTACTTGATGACTTTCCAATATGCAACGT ATCGGTTCATTCTTGCACCCATAACTAGATCTTCTTCTGCGTCTCAGTTC GCTTCAGAGCTCCCGGTGGGCACGATGAGTAGATTTTTTGTCGCCGTGCC TGTTGAACAATTCCACTGTTACAGGCATAAACACACTGGAACCAGGATTG TCATCCTATTGACATATTTCTCGCCTTGGGTGTTCTATGCGCGACGTTTT CCTTTTATTCAGGGAGGATTTTTCGCTATGGTGAGCGCCTTCCCTCCTCG GTATACTCAAGCGATGGTGGCGGGGCAGAGCTTGGCCGGTCTTGTGGTAG CGTTGATCGCTATCTTCACCTCGCTGATTGATTCTGATGATCAATCGTGT GTTTCAATCAGTACTTCTGGATCTAATTTTGACCAGATAGCGGACTCCCT CTTCTACGATTCCCAAGACACACCTAGTTGGCCACCAAAAACAACGGCGG GGGAAGCGACTGCTTCGGGTTCTGAAAGCTTCCACCAGTCGGAACCTTCG ATTTCTCAGCTGTTTTCATCAGTAACGACATCTATGGACTTTATGACACT AGCTCAGAACGGCATCGCAGTATTAGTTCTCTTGGGATGTATTGTGACCT ATCGTATACTGGAACGGCTGCCGTTGACGACATTCTACATGAAGAAGCTT ACCACGGAAGACGGCGATGGCTCTTCGTATGCAGGAAAAATAGATCAGGG CGATCTCACTCGGCATGCGCGGGTAAGAGACAGCTGTACTTGTGATAGAT GCATAGCCGGGAACGGGCAAGTCTGCAGTGGTACGAACACGGATGACAGT GGTCCATCACTGGGTACTGCCTCTGATAGCATAGGTTCTTCTCTGCGCCG GACAGGGCCCATCGAGGAATGGCGGCAGCTCCCACAGCAGCCGTTACCAA CGTTACCCAACACGGAGTCTCTAAGAAACCCTCTCTTATCAGCTGACAGT TCAACGCTACTGGCCCTCGGAGAAGGTGAAAGGAAACGCAGCATGAGCAA CCCTTCGATTGTAGTTGGGCGTACAGATTTCGTGCTGGGCGCTGCAAACG TGAACGAAAGTCACCTAAGTCGTCGGTTGACGCGGCGAGTCAAGGGCAAG TTCAAACCAATTTCTCGATACTCATTCTCAGTGTTTTTCTGCTTTTTAGT TTCGATATCTATGTATCCAGCCGTCATTTCAGAGATAGTATCTACTCAGG GATGTACCGCTGGCCGGGCGCGGTTTTTTGGTCAAGACACTTTCATATTG TTTTCGTTTGTCTCGTACAATGCGTCTGACTTCTTGGGCCGGCTGACGGC GGGGTGTACGGGCCTCTGCACCGTATGTGGCATTTCGCCTGAAACCTGGC TGCCAGTTGCGGCAGTCACCCGGGTTGTTTTCGTGCCGCTGTTGTTGGCG TGCCGTACGACCTCGTCGAAGGATTTGATGCAGAATATAGAGTGGCTGTA TGATTGGATGAGTGGTTCCGATATTTACCCCCTGACTATCGTGCCACTTT TCGGTTTCACGAACGGCTTCCTGGTTAGCTTGAGTATGATGGGTGGTTCT CGGAAGGGTCCATGGGCTGGGACAGTTATGGCGCTCTCTCTGAATGTTGG GTTGTTCGCTGGTTCTTTGACATCTTTCTTAGTGTTGGCTGTGAACGGAT GAGGGAGGATCACGGCCGTTTATTGAATGCAAATGTAAGTGATACGAATA CACCGCTGCGTTCTGGTCTCGAATTGATACTATGATTGTTGCTCGCCGAC ACGGCCAGCCACTGTTAGGGGTGCGCCTAAGTCCTGGATTGTCGTGAAAT TTCTTCTGTGTATAAAAGAGAAGCAGAAAATGTAGTCGTTTTAGATATTA ATAGTTTTTTTTCTAGTGTAATGAAAAAATATGATATGCCTGTTTGTCCA GGCGAATGGGTTTTTGATAATATTGAGTGTGATATTACTGCCCCAAGTTA CCATATACCGCCATTACCGTTTATTCAC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig8443:436..2813+

>mRNA_H-paniculata_contig8443.16441.1 ID=mRNA_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at H-paniculata_contig8443:436..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTTTGATATTGATATCTGGCTTATCAATTGCAGTTTTACAGATGGT
TTTGATATTGATATCTGGCTTATCAATTGCAGTTTTACAGGGAGGATTTT
TCGCTATGGTGAGCGCCTTCCCTCCTCGGTATACTCAAGCGATGGTGGCG
GGGCAGAGCTTGGCCGGTCTTGTGGTAGCGTTGATCGCTATCTTCACCTC
GCTGATTGATTCTGATGATCAATCGTGTGTTTCAATCAGTACTTCTGGAT
CTAATTTTGACCAGATAGCGGACTCCCTCTTCTACGATTCCCAAGACACA
CCTAGTTGGCCACCAAAAACAACGGCGGGGGAAGCGACTGCTTCGGGTTC
TGAAAGCTTCCACCAGTCGGAACCTTCGATTTCTCAGCTGTTTTCATCAG
TAACGACATCTATGGACTTTATGACACTAGCTCAGAACGGCATCGCAGTA
TTAGTTCTCTTGGGATGTATTGTGACCTATCGTATACTGGAACGGCTGCC
GTTGACGACATTCTACATGAAGAAGCTTACCACGGAAGACGGCGATGGCT
CTTCGTATGCAGGAAAAATAGATCAGGGCGATCTCACTCGGCATGCGCGG
GTAAGAGACAGCTGTACTTGTGATAGATGCATAGCCGGGAACGGGCAAGT
CTGCAGTGGTACGAACACGGATGACAGTGGTCCATCACTGGGTACTGCCT
CTGATAGCATAGGTTCTTCTCTGCGCCGGACAGGGCCCATCGAGGAATGG
CGGCAGCTCCCACAGCAGCCGTTACCAACGTTACCCAACACGGAGTCTCT
AAGAAACCCTCTCTTATCAGCTGACAGTTCAACGCTACTGGCCCTCGGAG
AAGGTGAAAGGAAACGCAGCATGAGCAACCCTTCGATTGTAGTTGGGCGT
ACAGATTTCGTGCTGGGCGCTGCAAACGTGAACGAAAGTCACCTAAGTCG
TCGGTTGACGCGGCGAGTCAAGGGCAAGTTCAAACCAATTTCTCGATACT
CATTCTCAGTGTTTTTCTGCTTTTTAGTTTCGATATCTATGTATCCAGCC
GTCATTTCAGAGATAGTATCTACTCAGGGATGTACCGCTGGCCGGGCGCG
GTTTTTTGGTCAAGACACTTTCATATTGTTTTCGTTTGTCTCGTACAATG
CGTCTGACTTCTTGGGCCGGCTGACGGCGGGGTGTACGGGCCTCTGCACC
GTATGTGGCATTTCGCCTGAAACCTGGCTGCCAGTTGCGGCAGTCACCCG
GGTTGTTTTCGTGCCGCTGTTGTTGGCGTGCCGTACGACCTCGTCGAAGG
ATTTGATGCAGAATATAGAGTGGCTGTATGATTGGATGAGTGGTTCCGAT
ATTTACCCCCTGACTATCGTGCCACTTTTCGGTTTCACGAACGGCTTCCT
GGTTAGCTTGAGTATGATGGGTGGTTCTCGGAAGGGTCCATGGGCTGGGA
CAGTTATGGCGCTCTCTCTGAATGTTGGGTTGTTCGCTGGTTCTTTGACA
TCTTTCTTAGTGTTGGCTGTGAACGGATGAGGAGGATTTTTCGCTATGGT
GAGCGCCTTCCCTCCTCGGTATACTCAAGCGATGGTGGCGGGGCAGAGCT
TGGCCGGTCTTGTGGTAGCGTTGATCGCTATCTTCACCTCGCTGATTGAT
TCTGATGATCAATCGTGTGTTTCAATCAGTACTTCTGGATCTAATTTTGA
CCAGATAGCGGACTCCCTCTTCTACGATTCCCAAGACACACCTAGTTGGC
CACCAAAAACAACGGCGGGGGAAGCGACTGCTTCGGGTTCTGAAAGCTTC
CACCAGTCGGAACCTTCGATTTCTCAGCTGTTTTCATCAGTAACGACATC
TATGGACTTTATGACACTAGCTCAGAACGGCATCGCAGTATTAGTTCTCT
TGGGATGTATTGTGACCTATCGTATACTGGAACGGCTGCCGTTGACGACA
TTCTACATGAAGAAGCTTACCACGGAAGACGGCGATGGCTCTTCGTATGC
AGGAAAAATAGATCAGGGCGATCTCACTCGGCATGCGCGGGTAAGAGACA
GCTGTACTTGTGATAGATGCATAGCCGGGAACGGGCAAGTCTGCAGTGGT
ACGAACACGGATGACAGTGGTCCATCACTGGGTACTGCCTCTGATAGCAT
AGGTTCTTCTCTGCGCCGGACAGGGCCCATCGAGGAATGGCGGCAGCTCC
CACAGCAGCCGTTACCAACGTTACCCAACACGGAGTCTCTAAGAAACCCT
CTCTTATCAGCTGACAGTTCAACGCTACTGGCCCTCGGAGAAGGTGAAAG
GAAACGCAGCATGAGCAACCCTTCGATTGTAGTTGGGCGTACAGATTTCG
TGCTGGGCGCTGCAAACGTGAACGAAAGTCACCTAAGTCGTCGGTTGACG
CGGCGAGTCAAGGGCAAGTTCAAACCAATTTCTCGATACTCATTCTCAGT
GTTTTTCTGCTTTTTAGTTTCGATATCTATGTATCCAGCCGTCATTTCAG
AGATAGTATCTACTCAGGGATGTACCGCTGGCCGGGCGCGGTTTTTTGGT
CAAGACACTTTCATATTGTTTTCGTTTGTCTCGTACAATGCGTCTGACTT
CTTGGGCCGGCTGACGGCGGGGTGTACGGGCCTCTGCACCGTATGTGGCA
TTTCGCCTGAAACCTGGCTGCCAGTTGCGGCAGTCACCCGGGTTGTTTTC
GTGCCGCTGTTGTTGGCGTGCCGTACGACCTCGTCGAAGGATTTGATGCA
GAATATAGAGTGGCTGTATGATTGGATGAGTGGTTCCGATATTTACCCCC
TGACTATCGTGCCACTTTTCGGTTTCACGAACGGCTTCCTGGTTAGCTTG
AGTATGATGGGTGGTTCTCGGAAGGGTCCATGGGCTGGGACAGTTATGGC
GCTCTCTCTGAATGTTGGGTTGTTCGCTGGTTCTTTGACATCTTTCTTAG
TGTTGGCTGTGAACGGATGA
back to top