mRNA_H-paniculata_contig8443.16441.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: D8LP16_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP16_ECTSI) HSP 1 Score: 306 bits (784), Expect = 7.760e-93 Identity = 217/536 (40.49%), Postives = 294/536 (54.85%), Query Frame = 2
Query: 8 RYQDKFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDDQSCVSISTSGSNFDQIADSLFYDSQDTPSWPPKTTAGEATASGSESFHQSEPSISQLFSS--VTTSMDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYMKKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLSADSSTLLALGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRKGPWAGTVMALSLNVGLFAGSLTSFLVL 1609
RYQ+++ L RI+GSL VS FV C + VLAEG++ LF TM LI++SGL AVLQGG FAM SAFPPRYTQAM+AGQ LAGL VAL +FT+L DD+SC+ +D IA D DT T G ++ +Q + L S + D+ T GIAV+VLLGCI+TY +L RLP +FY+ GDG D+G ++ RVR+ GN G DD G LG ++ S+ +R+L +PL S + EGER + S + +G+ + ++ + PIS Y+F+VF F V++S++P S+IVS+Q C +GR+RFF D F++FSFVS+NA D LGRL AG + P WLP A+V+R++FVPL+LACR+ S+ DW+S +D++PLT++P+F FTNG++ SLSMM GS+ G WAGT M L L+ GL AGSL SFLVL
Sbjct: 71 RYQEQWDLTGRIMGSLAVSLGTFVACGIFVLAEGVNGTLLFFCTMGLIVVSGLCTAVLQGGIFAMASAFPPRYTQAMMAGQGLAGLAVALAGLFTTLAGPDDESCIV-----DLYDTIA--TVRDGGDTGGSADVLTEGHLAR---QATYQRASDVDPLLGSSCAAYARDWSTFVYFGIAVMVLLGCILTYPLLRRLPFASFYINTAVGL-GDG------CDEGGVSV-GRVRE---------GNPD---GGGADDDGW-LGVGRSAVTSTTTSPTGSSMYRRLVDKPL-----------------SDCTMHDAEGERDGAQKRESATIVNGGSYVGSDTPVDG---------LRSRLAPISSYAFAVFLVFTVTLSIFPGATSDIVSSQRCQSGRSRFFAGDVFVMFSFVSFNAFDLLGRLVAG------LAVALPYAWLPTASVSRLMFVPLMLACRSEHSR--------FRDWLS-ADVFPLTLMPVFAFTNGYVGSLSMMAGSQLGAWAGTAMVLFLSGGLLAGSLLSFLVL 534
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: W7TF57_9STRA (Equilibrative nucleoside transporter 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF57_9STRA) HSP 1 Score: 122 bits (307), Expect = 7.630e-26 Identity = 163/564 (28.90%), Postives = 230/564 (40.78%), Query Frame = 2
Query: 20 KFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDDQSCVSISTSGSNFDQIADSLFYDSQDTPSWPPKTTAGEATASGSESFHQSEPSISQLFSSVTTSMDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYM-----------------KKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLS-ADSSTLLALGEGERKRSMSNP-SIVVGRTDFVLGAANVN-ESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA------AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSFLVLAVN 1618
K S+ RI+ L + F +LVL + S + +F T + + + G +VLQ F +AFPPRYTQAM+AGQ LAGL+VA + T+ + +C + + Q GE A+ S +D+ LA G AV++L CIV++ LERLPL F++ K T G S +GK D + +R R AG G ASD SS+ G LPNT+ LLS DSS L GE +R N S G T ++V H+S + R G +VF F ++++++P+ IVS + C GR F+ Q F+ F F+ +N D+ GR T+ G P +L A A RVVF+PL L C S I + DW +P+ + F +NG+L SL+MM G + G VM L + GL AGS+ SFLV AV+
Sbjct: 48 KCSITFRIVLPLALLLSIFAATAVLVLVKDASRDGMFSFTALSVALCGFCTSVLQAAIFGYAAAFPPRYTQAMMAGQGLAGLIVAAAGLATAASSRANGACAGVHLTEEGPGQ---------------------GEQMAA----------------CSAYQEIDYHALAYFGTAVVILGVCIVSFLYLERLPLAQFFVGYNKRHVHSPRGAAGGGSKATLGLGGNRSGSGKGDDASVVESG-LRALPMAVRSGAGGEGAADKEAVGVDGEQGEEASDEE-SSVGLVG--------------VLPNTDPCA--LLSRVDSSLSLLSAHGEDERGDGNEESESWGNTTLHDIKSSVRTHQHVSFLVLLRRLGS------PGLAVFLVFSITLALFPSTTVHIVSVRRCQ-GRGVFYDQ-AFVPFQFLLFNLGDWGGR---------TLAGHLPSPFLVPAHRLSFYAAARVVFLPLFLLCNVDDSAF---PIVFAADW------WPMLFMLFFSLSNGYLSSLAMMRGPAQLTVDQAERGGNVMVLLMTAGLSAGSVLSFLVSAVS 530
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8B6XKA7_HYDVU (equilibrative nucleoside transporter 1-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XKA7_HYDVU) HSP 1 Score: 90.1 bits (222), Expect = 1.930e-15 Identity = 67/203 (33.00%), Postives = 102/203 (50.25%), Query Frame = 2
Query: 1019 NVNESHLSRRLTRR---VKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFI-LFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGG-----SRKGPWAGTVMALSLNVGLFAGSLTSF 1600
NV +S S + ++ FK I FSV F V++S++PAV+S+IVST + R F D F L F +N + GR+ +G + G WLP+ +R++F+PL L C + L+ ++ D +P+ I LF F++G+L SL MM G ++ AGT+M+ L GL AG+L SF
Sbjct: 250 NVKQSEYSANILKKKIPYYAIFKQIMPLGFSVSAVFCVTLSLFPAVVSKIVSTNKSNSSR---FANDLFSSLVCFFIFNCGNLAGRIASGFYQIVNEKG----PWLPLLCFSRILFIPLFLMCHFKNGSILLYVFKY--------DYWPVIINCLFAFSHGYLGSLCMMFGPKLVSAKYSETAGTIMSCFLTTGLTAGALLSF 437
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: T2M747_HYDVU (Equilibrative nucleoside transporter 1 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M747_HYDVU) HSP 1 Score: 85.1 bits (209), Expect = 8.240e-14 Identity = 62/182 (34.07%), Postives = 87/182 (47.80%), Query Frame = 2
Query: 1073 FKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILF-SFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSF 1600
FK I + SV F V++S++PAV+S IVS R F D F F F +N D GR+ AG + G WLP+ +R++F+PL L C + L + +D +P+ I LF +NG+L SL MM G + AGT+M+ L GL AG+ SF
Sbjct: 274 FKQILPLAISVSVVFCVTLSLFPAVVSRIVSVDKSKTSR---FTNDLFSTFVCFFIFNCGDLAGRIAAGSYQIVAERG----PWLPILCFSRILFIPLFLMCHFENGSPLTYIFK--------NDYWPIIINSLFALSNGYLGSLCMMFGPKLVSAEYSETAGTMMSFFLTAGLTAGACLSF 440
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8I6A1R8_RAT (Equilibrative nucleoside transporter 1 n=1 Tax=Rattus norvegicus TaxID=10116 RepID=A0A8I6A1R8_RAT) HSP 1 Score: 82.4 bits (202), Expect = 6.100e-13 Identity = 72/231 (31.17%), Postives = 107/231 (46.32%), Query Frame = 2
Query: 938 LGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSFLVLAV 1615
+ EGE R S V G AN N+S +K K I + SV F F V+I ++PAV +E+ S+ AG + + + F+++N D+LGR T +C G WLPV RVVF+PLL+ C L + D++ +T + F F+NG+L SL M G +K AG +M+ L +GL G++ SFL+ A+
Sbjct: 240 ISEGEEPRGGREESGVPGPNSL---PANRNQS---------IKAILKSIWVLALSVCFIFTVTIGLFPAVTAEVESS---IAGTSPWKNCYFIPVACFLNFNVFDWLGR---SLTAICMWPG-QDSRWLPVLVACRVVFIPLLMLCNVKQHHYLPSLFK--------HDVWFITFMAAFAFSNGYLASLCMCFGPKKVKPAEAETAGNIMSFFLCLGLALGAVLSFLLRAL 443
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A4V1J034_ROZAC (Uncharacterized protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4V1J034_ROZAC) HSP 1 Score: 78.6 bits (192), Expect = 8.900e-12 Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2
Query: 5 SRYQDKFSLRRRILGSLGVSAFAFVVCVLLVLAEGLSSNSLFLATMVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFTSLIDSDD 313
++ KFSL R++ L ++ F F++ +L + + +S F TM IL+ G+S +LQ G F + FPP YTQA++ GQ +AGLVV L AIFT+L+ S+D
Sbjct: 72 TKVDHKFSLPVRVVSGLVMNGFVFLLSTMLTAFDSFAPDSFFFITMGSILLCGISTGILQKGLFGLAGEFPPIYTQAIMNGQGIAGLVVTLSAIFTTLLSSND 174
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A0D2WM26_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WM26_CAPO3) HSP 1 Score: 77.4 bits (189), Expect = 4.580e-11 Identity = 95/383 (24.80%), Postives = 158/383 (41.25%), Query Frame = 2
Query: 470 SISQLFSSVTTS-MDFMTLAQNGIAVLVLLGCIVTYRILERLPLTTFYMKKLTTEDGDGSSYAGKIDQGDLTRHARVRDSCTCDRCIAGNGQVCSGTNTDDSGPSLGTASDSIGSSLRRTGPIEEWRQLPQQPLPTLPNTESLRNPLLSADSSTLLALGEGERKRSMSNPSIVVGRTDFVLGAANVNESHLSRRLTRRVKGKFKPISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRK-----GPWAGTVMALSLNVGLFAGSLTSF 1600
S++ +FS+V +S +A ++V+V+LGC++ + +L RLP+ FYM E D + +L R + R G+ + S + D+ S + SS+ GP+ P P P+ +T S LS + G S I V R+ F G +K I + +V + F V++S++P++ S I S + FF + F+ +N D+ GR+ A + + W+P+ R +F+P + C + ++ D + SD +P ++ LF TNG+ SL MM K AGT+M L++GL GSL SF
Sbjct: 373 SLASIFSTVGSSNQQVSAIAYFTVSVVVILGCLIGFFVLLRLPVYKFYM-----EVADHHKAVQSQSRINLLRDKQQRYGSG-----EGSSPLLSPSRLSDN-----MLSSPLDSSVIVNGPMGGSSPAPPSPTPSTYSTTSPTKMRLS-----MFRRRNGSNHDSERGSQITVARS-FDFGDV------------------WKRIWPLALAVGYNFFVTLSVFPSITSSINSYTAASDPDNYFFNNLFTAVSCFLFFNLGDYFGRILASWFAFPS----AKYVWIPILL--RTIFIPFFMLCNISGTR---------LDVVFTSDAWPFILMALFATTNGYFGSLCMMYAPNKVEVHEKEIAGTMMVFCLSLGLSLGSLISF 701
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A364L445_9EURO (Uncharacterized protein n=3 Tax=Eurotiales TaxID=5042 RepID=A0A364L445_9EURO) HSP 1 Score: 74.3 bits (181), Expect = 2.780e-10 Identity = 60/178 (33.71%), Postives = 89/178 (50.00%), Query Frame = 2
Query: 1100 SVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA----AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPL-FGFTNGFLVSLSMMGGSR-----KGPWAGTVMALSLNVGLFAGSLTSFL 1603
+V+ CF V++ +YP ++ S A R+R F + FI +F+ +N D +GR++ V ++ T P A +V+R+VF+PL LAC S + N SD + L +V L FG TNGFL S MMG + + AG M++ L GL GSL SF+
Sbjct: 319 AVYLCFTVTM-IYPVFTVKVQSVHNDPATRSRIFEPELFIPLAFLFWNMGDLIGRMSP------IVPALARTTNYPRALFAFSVSRLVFIPLYLACNVRSGGVTLVN----------SDFFYLFVVQLGFGLTNGFLGSACMMGAGQYVTADEREAAGGFMSMMLIAGLATGSLLSFV 479
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8K1FF02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF02_PYTOL) HSP 1 Score: 72.0 bits (175), Expect = 1.310e-9 Identity = 54/184 (29.35%), Postives = 95/184 (51.63%), Query Frame = 2
Query: 1082 ISRYSFSVFFCFLVSISMYPAVISEIVSTQGCTAGRARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVAAVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMM------GGSRKGPWAGTVMALSLNVGLFAGSLTSFLVLAV 1615
I Y +VF F+V++S++P ++S + ST R R FG D F+ F+ NA DF+GR A T E L + + R++F PL++ C + ++++ + + +D P+ + + FTNG + + ++M +R+ GTVM L++GL +GSL SF+ +A+
Sbjct: 273 IRYYGAAVFLVFMVTLSLFPGLVSLLHSTN---PSRGRLFG-DLFVPALFILVNAGDFVGRWVA------TSWPTPTEQRLFYSTLARLIFCPLIMFCNLQN-----EHLQPITLVLFKNDFIPILGIAICSFTNGLICTQALMLYPRALTTAREKEMGGTVMFFLLSLGLSSGSLLSFVFIAM 441
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Match: A0A8C4RAE1_EPTBU (Solute carrier family 29 member 3 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RAE1_EPTBU) HSP 1 Score: 70.5 bits (171), Expect = 4.060e-9 Identity = 58/177 (32.77%), Postives = 83/177 (46.89%), Query Frame = 2
Query: 1097 FSVFFCFLVSISMYPAVISEIVSTQGCTAGR--ARFFGQDTFILFSFVSYNASDFLGRLTAGCTGLCTVCGISPETWLPVA-AVTRVVFVPLLLACRTTSSKDLMQNIEWLYDWMSGSDIYPLTIVPLFGFTNGFLVSLSMMGGSRKGP-----WAGTVMALSLNVGLFAGSLTSFL 1603
F VF+CF +SIS++PAV++ I T G ++F + F+ YN SD +GR AG V SP + L +A + R F+PL L C N+ SD++P+ I G +NG+L SL++ G + P G M + L GL GSL S L
Sbjct: 279 FCVFYCFFISISLFPAVLANIEPTSSRLKGSWLTKYFTP----VCIFLLYNVSDLVGRTVAG-----WVQWPSPHSRLLLALTLLRTGFIPLTLICHFDPRNHFSANLL-------SSDVFPIFIASTLGLSNGYLGSLALEYGPKVVPPELTEATGVAMMVFLTSGLATGSLFSVL 439 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8443.16441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8443.16441.1 >prot_H-paniculata_contig8443.16441.1 ID=prot_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=495bp MVLILISGLSIAVLQGGFFAMVSAFPPRYTQAMVAGQSLAGLVVALIAIFback to top mRNA from alignment at H-paniculata_contig8443:436..2813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8443.16441.1 ID=mRNA_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2378bp|location=Sequence derived from alignment at H-paniculata_contig8443:436..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8443:436..2813+ >mRNA_H-paniculata_contig8443.16441.1 ID=mRNA_H-paniculata_contig8443.16441.1|Name=mRNA_H-paniculata_contig8443.16441.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2970bp|location=Sequence derived from alignment at H-paniculata_contig8443:436..2813+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |