mRNA_H-paniculata_contig8348.16364.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A6H5KE38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE38_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.440e-104 Identity = 177/253 (69.96%), Postives = 204/253 (80.63%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVEDDGGDD--ETYVTKVMSMFPALKVRDAKRVLKKKSHTYYEQRAMMELDGAEKG--GARVDNAKR 747
VTYLTAA NELTG+GLDGVRPL+DL VFNASGNR++R+P AVFAQFR LQALVL++NEI+EVPPTWLKKGL +LNTLVLSHNK+KSL TGLGRLTALTKLSIS+N L ELPDLSAC LEELRA+HN +++VPASL+ N ALRTLDLGHN I +W GLE+LG+SL SL+QLSLSGNP+C +A G +D E YV KV S+FP LKVRD KR+L KKSHTYYEQR + GA G R D+A R
Sbjct: 91 VTYLTAAGNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKKGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNNIDDWVGLERLGESLKSLMQLSLSGNPICGAAAAAEKRGTGEEDGEEDYVAKVRSLFPGLKVRDGKRILMKKSHTYYEQRGGEQGTGAXXXXXGGRKDSAMR 343
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: D7FIN7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN7_ECTSI) HSP 1 Score: 306 bits (784), Expect = 3.180e-93 Identity = 168/260 (64.62%), Postives = 196/260 (75.38%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVEDDGGDD--ETYVTKVMSMFPALKVRDAKRVLKKKSHTYYEQRAMMELDGAEKGGARVDNAKR-ETPGDGGR 771
VTYLTAA+NELTG+GLDGVRPL+DL VFNASGNR++R+P AVFAQFR LQALVL++NEI+EVPPTWLK+GL +LNTLVLSHNK+KSL TGLGRLTALTKLSIS+N L ELPDLSAC LEELRA+HN +++VPASL+ N ALRTLDLGHN I +W GLE+LGKSL SL+QLSLSGNP+C +A G +D E YV KV S+FP LK R + GA GG R D+A R TPG GG+
Sbjct: 93 VTYLTAASNELTGDGLDGVRPLKDLKVFNASGNRVRRIPPAVFAQFRQLQALVLSDNEISEVPPTWLKQGLLSLNTLVLSHNKLKSLSGTGLGRLTALTKLSISYNTLVELPDLSACSGLEELRAAHNIVTQVPASLSKNAALRTLDLGHNRIDDWVGLERLGKSLKSLMQLSLSGNPICGAAAAAEKSGTGEEDGEEGYVAKVRSLFPGLK------------------RGGEQGAGAGAGGGRKDSALRGTTPGTGGK 334
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A835Z8M8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8M8_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.050e-42 Identity = 117/283 (41.34%), Postives = 142/283 (50.18%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFN-LNTLVLSHNKVKSLKDTGLGRLTALTK-------------------------------------------LSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCA----------------SATGVSVEDDGGDDETYVTKVMSMFPALKVRDAKRVLKKKSH 669
VTYL NELTGEGLDGVR L DL V NA+ N++K VPAAVF FR LQ LVLN+N IA VP TW KKG+ LNTLVLSHN + SL D+GL +L LTK LS SHN L E+PDLSAC P L+ ALR LDLGHN + EW ++KL + +LVQL+L G P+ +A +VE+D Y +K+ +FP LK +D +R L K SH
Sbjct: 69 VTYLKVDNNELTGEGLDGVRCLPDLNVLNAAHNQIKTVPAAVFGAFRGLQVLVLNDNAIAAVPRTWWKKGVAAALNTLVLSHNAIASLSDSGLDKLAMLTKRDAAAARRGAAMPSAAAAIITERSERCFYERCCGLDKFAMLTELSASHNQLSEMPDLSACAXXXXXXXXXXXXXXXPVWLSELAALRLLDLGHNAVSEWSEVKKL-TTAPALVQLTLRGCPISGVTSVPGEQQQHAAGDGAAPAAAVEEDAERVAEYESKMKKLFPKLKTQDGQRTLPKISH 350
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A7S1XKR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR6_9STRA) HSP 1 Score: 145 bits (366), Expect = 7.280e-36 Identity = 102/268 (38.06%), Postives = 144/268 (53.73%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKV-KSLKDTGLGRLTALTKLSISHNLLHELPDLSAC-RALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCA------SATGVSVEDDGGDDE-----------------TYVTKVMSMFPALKVRDAKRVLKKKSHTYYEQRAMMELDGAEKGGAR 729
+++L AA NELTGEGL G+ L L NA N++K +P F + ++L+ALVLN+NEI+ +LKK L L LVLS N++ L L +L K++++ N + ELPDLS C L ELRA++N + VP +L L+ ++LG N I WR L L SL + LSL GNP+C A + ED G++ YV KV +FP L V D +RV+ K++H + + E GAE GG+R
Sbjct: 10 LSWLQAAENELTGEGLAGLHGLEALVTLNAGRNKIKAIPPGTFTRCKSLKALVLNDNEISATD--FLKK-LKGLTVLVLSRNQLGPQLNPRHFAGLRSLMKINLAGNAIEELPDLSPCAETLVELRAANNALRGVPQTLRRCKKLKVVELGSNRISSWRALAPL-TSLERITHLSLKGNPICTWAAEAPEAPAAAPEDGSGEEPDTEEEESEDDKANKPATNYVDKVRELFPKLVVMDGQRVMLKRTHGFKKPEG--ENAGAEDGGSR 271
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A2D4BR18_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR18_PYTIN) HSP 1 Score: 148 bits (374), Expect = 4.780e-35 Identity = 95/249 (38.15%), Postives = 134/249 (53.82%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFN---LNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPL------CASATGVSVEDDGGDDET---------------YVTKVMSMFPALKVRDAKRVLKKKSHTY 675
+T L N+L GEGL +R L+ L N + N + R+P V L+ALVLNNN I + W+ K LN+L++SHN++ L + RL LTK+S++HNLL ELPDLS+ + S N++ VP SLA L+ L+LGHNEI +W G+E L K L SL Q+SL+GNP+ + T +++D ++ Y K+ +FP L +RD RVL KK H Y
Sbjct: 81 LTMLKLMENKLNGEGLAELRHLKKLVTLNIADNVVLRIPTDVLRHMSQLKALVLNNNSITTLE--WIPKLSVRGNQLNSLIVSHNRIPELAPRIVDRLPNLTKISMTHNLLEELPDLSSLKNXXXXXFSXNKLKTVPKSLAQLPKLKILELGHNEIDDWEGIEALSK-LDSLKQISLTGNPIYGVPLDASKTTETELKEDASAEDKAKMKEXXRLEAKHKQYNFKMKRLFPNLVIRDGHRVLNKKVHGY 326
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A396ZVE2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A396ZVE2_9STRA) HSP 1 Score: 121 bits (304), Expect = 7.320e-27 Identity = 86/268 (32.09%), Postives = 131/268 (48.88%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSI----------------------SHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVE--DDGGDDETYVT---------------------KVMSMFPALKVRDAKRVLKKKSH 669
+T L +N L G+ + + L + S N+L R+P A L+ALVL N + + W+ L L +L++SHN++ + +G+L LTKL + SHN L ELPDLSA L ELRAS+NQ++ +PAS+ N+ L+ +D+ HN I + GL++ SL L QL+L GNP+C + + +E D + E T K+ +FPAL VRD +R+ K++H
Sbjct: 83 LTQLKITSNVLVDAGIVDLSFCKQLVTLDLSDNKLARLPGASLRHCTGLRALVLTKNAMTSLE--WVP-SLPGLTSLIVSHNRITEISAKSIGKLKGLTKLQLYCTPPSILSMSLNQYGHYNYRSSHNKLTELPDLSALEQLTELRASNNQLTALPASINHNVNLKIVDVCHNHIDTFDGLDQW-TSLAQLKQLNLRGNPICGQNSTIPMELVDSAKEKEEDATVSQVDLAERKALDKKNKLYNFKMKRLFPALIVRDGQRIQDKRTH 346
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A662XYI4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYI4_9STRA) HSP 1 Score: 103 bits (258), Expect = 7.780e-20 Identity = 90/295 (30.51%), Postives = 125/295 (42.37%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAE--------VPPTWLKKG------------------------LFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVEDDGGDD--------------------------------------ETYVTKVMSMFPALKVRDAKRVLKKKSHTY 675
VT L N+L GEGL ++ L+ L + NA+ N++ R+P V R+L+ALVLNNN I V +WLK + LN+L++SHN++ + L L LTK+SI+H C L L A N L+ L+L HN+I +W GLE L SL +L QL+++GNPL V V+ G DD + Y K+ +FP L VRDA+RVL K+ H Y
Sbjct: 82 VTMLKLTDNKLNGEGLAEIQHLKKLVILNAAENQVTRIPYEVMRNMRSLKALVLNNNSITTLDWMPKLPVCSSWLKNARNGSRSLCCRSKCVVNSFVCVPCNVQELNSLIVSHNRIAQIPQRILDWLPNLTKISIAH----------LCVLLSILAAVEN--------------LKVLELSHNQIDDWAGLEALS-SLENLRQLNMTGNPLVGQKLEV-VKKSGDDDXXXXXXXXXXXDGESTKIELSAEEKQKLKESKRLDAKHKQYNFKMKRLFPNLVVRDAQRVLDKRVHGY 350
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: M4BDR9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDR9_HYAAE) HSP 1 Score: 98.6 bits (244), Expect = 3.670e-18 Identity = 71/195 (36.41%), Postives = 94/195 (48.21%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCAS---ATGVSVEDDG 576
VT L N+LTG+GL ++ L+ L + NA+ N + R+P V R L+ALVLNNN I+ + W+ K + LG L L K+SISHNLL E+PDLS + ELR SHN+I VPA LA ++ SL +L QL+L GNP+ T VE G
Sbjct: 77 VTMLKLTDNKLTGDGLAEIQHLKKLVILNAAENSVTRIPFEVLRNVRTLKALVLNNNSISTLD--WIPK---------------LPIPQRVLGGLPNLKKISISHNLLEEIPDLSQLSEITELRLSHNRIKTVPAHLA-HLKXXXXXXXXXXXXXXXXXXXXXXSLHNLRQLNLIGNPIVGKKLPTTAGDVEKSG 253
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: W4G4F9_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G4F9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.970e-15 Identity = 67/249 (26.91%), Postives = 111/249 (44.58%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVE--------DDGG----------------DDETYVTKVMSMFPALKVRDAKRVLKKKSHTY 675
+T L +N L G+ + + L + S N+L R+P A L+ALVL N + + W+ L L +L++SHN++ + +G+ LPDL+A PAS+ N+ L+ +D+ HN I + GL++ SL L QL+L GNP+C ++ + +E +D ++ Y K+ +FPAL VRD +R+ K++H Y
Sbjct: 90 LTQLKITSNVLVDAGIVDLSFCKQLVTLDLSDNKLARLPGASLRHCTGLRALVLTKNAMTSLE--WVP-SLPGLTSLIVSHNRITEISAKSIGKXXXXXXXXXXXXXXXXLPDLTALEQXXXXXXXXXXXXXXPASINHNVNLKIVDVCHNHIDTFDGLDQW-TSLAQLKQLNLRGNPICGQSSTLPMELVESAKEKEDASATVSQVDLAERKALDKKNKLYNFKMKRLFPALIVRDGQRIQDKRTHGY 334
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Match: A0A8K1CHT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHT4_PYTOL) HSP 1 Score: 87.4 bits (215), Expect = 1.310e-14 Identity = 73/261 (27.97%), Postives = 106/261 (40.61%), Query Frame = 1
Query: 1 VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQALVLNNNEIAEVPPTWLKKGLFNLNTLVLSHNKVKSLKDTGLGRLTALTKLSISHNLLHELPDLSACRALEELRASHNQISEVPASLAANIALRTLDLGHNEIGEWRGLEKLGKSLTSLVQLSLSGNPLCASATGVSVEDDGGDD------------------------------------ETYVTKVMSMFPALKVRDAKRVLKKKSHTY 675
+T L N+L G+GL ++ L+ VLNNN I + W+ LN+L++SHN++ L + RL LTK+S++HNLL ELPDLS+ + + ELR SHN+I +PASLA L +L QLSL+GNP+ + + + Y K+ +FP+L +RD RVL KK+H Y
Sbjct: 75 LTMLKLTDNKLNGDGLAELQHLKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLNNNAITTLE--WIP-AFPELNSLIVSHNRIPQLLPRTIDRLPNLTKISMTHNLLEELPDLSSLKNITELRFSHNKIKTIPASLAXXXXXXXXXXXXXXXXXXXXXXXXXX-LENLKQLSLTGNPIYGVPLDATKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHKHYNFKMKRLFPSLVIRDGHRVLNKKTHGY 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8348.16364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8348.16364.1 >prot_H-paniculata_contig8348.16364.1 ID=prot_H-paniculata_contig8348.16364.1|Name=mRNA_H-paniculata_contig8348.16364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=532bp VTYLTAAANELTGEGLDGVRPLRDLTVFNASGNRLKRVPAAVFAQFRALQback to top mRNA from alignment at H-paniculata_contig8348:7287..10016- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8348.16364.1 ID=mRNA_H-paniculata_contig8348.16364.1|Name=mRNA_H-paniculata_contig8348.16364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2730bp|location=Sequence derived from alignment at H-paniculata_contig8348:7287..10016- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8348:7287..10016- >mRNA_H-paniculata_contig8348.16364.1 ID=mRNA_H-paniculata_contig8348.16364.1|Name=mRNA_H-paniculata_contig8348.16364.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3192bp|location=Sequence derived from alignment at H-paniculata_contig8348:7287..10016- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |