mRNA_H-paniculata_contig83.16320.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig83.16320.1
Unique NamemRNA_H-paniculata_contig83.16320.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig83.16320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig83contigH-paniculata_contig83:7368..11792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.3
Seed ortholog evalue5.5e-14
Seed eggNOG ortholog2880.D8LDS0
Preferred nameNAPEPLD
KEGG koko:K13985
KEGG Pathwayko04723,map04723
Hectar predicted targeting categoryother localisation
GOsGO:0001523,GO:0001659,GO:0001750,GO:0003674,GO:0003824,GO:0004620,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005768,GO:0005769,GO:0005794,GO:0005829,GO:0005886,GO:0005929,GO:0006066,GO:0006576,GO:0006629,GO:0006644,GO:0006650,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007568,GO:0008081,GO:0008150,GO:0008152,GO:0008270,GO:0009308,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016101,GO:0016298,GO:0016787,GO:0016788,GO:0019637,GO:0019866,GO:0031090,GO:0031224,GO:0031253,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031347,GO:0031349,GO:0031410,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032592,GO:0034308,GO:0034641,GO:0035900,GO:0036477,GO:0042439,GO:0042578,GO:0042592,GO:0042622,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0044106,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044441,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044463,GO:0044464,GO:0045595,GO:0045597,GO:0045598,GO:0045600,GO:0046337,GO:0046486,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048521,GO:0048522,GO:0048583,GO:0048584,GO:0048871,GO:0050727,GO:0050729,GO:0050789,GO:0050793,GO:0050794,GO:0050795,GO:0050896,GO:0051094,GO:0060170,GO:0060259,GO:0065007,GO:0065008,GO:0070013,GO:0070290,GO:0070291,GO:0070292,GO:0071704,GO:0071944,GO:0080134,GO:0090335,GO:0090336,GO:0097458,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098573,GO:0098588,GO:0098590,GO:0120025,GO:0120038,GO:1901564,GO:1901615,GO:1903998,GO:1903999,GO:2000252
EggNOG free text desc.N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
EggNOG OGsCOG2220@1,KOG3798@2759
EC3.1.4.54
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size721
Cds size483
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig83.16320.1prot_H-paniculata_contig83.16320.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig83 7576..11762 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931041.1559734-UTR-H-paniculata_contig83:7367..75751622931041.1559734-UTR-H-paniculata_contig83:7367..7575Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig83 7368..7575 -
1691481562.521802-UTR-H-paniculata_contig83:7367..75751691481562.521802-UTR-H-paniculata_contig83:7367..7575Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig83 7368..7575 -
1622931041.254594-UTR-H-paniculata_contig83:11762..117921622931041.254594-UTR-H-paniculata_contig83:11762..11792Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig83 11763..11792 -
1691481562.578755-UTR-H-paniculata_contig83:11762..117921691481562.578755-UTR-H-paniculata_contig83:11762..11792Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig83 11763..11792 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931041.1741083-CDS-H-paniculata_contig83:7575..75811622931041.1741083-CDS-H-paniculata_contig83:7575..7581Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 7576..7581 -
1691481562.5344374-CDS-H-paniculata_contig83:7575..75811691481562.5344374-CDS-H-paniculata_contig83:7575..7581Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 7576..7581 -
1622931041.195884-CDS-H-paniculata_contig83:8004..81721622931041.195884-CDS-H-paniculata_contig83:8004..8172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 8005..8172 -
1691481562.5448968-CDS-H-paniculata_contig83:8004..81721691481562.5448968-CDS-H-paniculata_contig83:8004..8172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 8005..8172 -
1622931041.2095125-CDS-H-paniculata_contig83:9004..90871622931041.2095125-CDS-H-paniculata_contig83:9004..9087Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 9005..9087 -
1691481562.5556965-CDS-H-paniculata_contig83:9004..90871691481562.5556965-CDS-H-paniculata_contig83:9004..9087Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 9005..9087 -
1622931041.2246945-CDS-H-paniculata_contig83:11536..117621622931041.2246945-CDS-H-paniculata_contig83:11536..11762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 11537..11762 -
1691481562.5664985-CDS-H-paniculata_contig83:11536..117621691481562.5664985-CDS-H-paniculata_contig83:11536..11762Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig83 11537..11762 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig83.16320.1

>prot_H-paniculata_contig83.16320.1 ID=prot_H-paniculata_contig83.16320.1|Name=mRNA_H-paniculata_contig83.16320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
MSDRRRPCRPDWRSAEEEGRHEKSPPSPLLSMRSCTLARNSVAATKMART
FQSAAAKGMSSTTAVDDASSTRAVEATVKRVLRAELPTVMKPPADAGLPP
PLTTERRTFFGKTVRTYDNPWAPGATAKKVGDLWKVMKSEDMAKVPSAID
VEKDLPSAEG*
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mRNA from alignment at H-paniculata_contig83:7368..11792-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig83.16320.1 ID=mRNA_H-paniculata_contig83.16320.1|Name=mRNA_H-paniculata_contig83.16320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4425bp|location=Sequence derived from alignment at H-paniculata_contig83:7368..11792- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCATAATTGCTGCGCAGAAGCCTTGATGTCATGAGTGATAGACGACGTCC TTGCCGACCTGACTGGCGCTCTGCAGAAGAAGAAGGACGTCACGAAAAAT CACCACCGTCACCATTGTTGTCAATGAGGTCTTGCACTTTAGCACGAAAC TCAGTAGCAGCAACAAAAATGGCGCGCACGTTTCAATCGGCTGCTGCGAA GGGTATGTCCAGCACAACCGCAGTGGACGATGCTTCTAGCACTAGGGCTG TTGAAGGCAAGATGTGTTACTGTTTGCTGTGTATGCACATTGCGTGTGTT TGTAGCAAAAGCGATTTAGAGCATGATTCAACAGTGCCCGTATTTCAGTT TGGAAGTGACAAGAGAGAAAGGACAAAATGAGTAGGTATCTCCTGCTCAC CCACAACAACCAGTGATCGAATAAAGAAGGGTGTATATCCCATCGCCCAA TTTTGCCGATGTGCGTGGATGAAGGATGCACTCTCCGAACGACATGTTGT TGACTCTCCAGGCTGGCAAGTTAGATCCTCTGTGCTCGGTACTCAAACCT ACATTCTTGTTGGATATTCCGTGATACTGAGTTGCGCAACTCCTCTCGGA GGGTGGTATACCCCGTATCACCAGTGGATGTGGAAAATGAGTAAATTTGT AAAGTCACGCGTAATACCGTTTTTTTTTTTTTTAACACCCTCAAAAAATT ATACTCGGCGCAGTCTGTGATGCCGGGGAAGAAGAAAACCACAATAGATG TGGTACACAGTGATAAGAAAAATATGTTGCAACCTCTTGCAAGAACTCCG TAATAATTTTATCAACATCACCGCACGAATCGCTCTCGTTTATCGAAATA CGGAAATATATATATACTATGTGAGCAAATTGTACAGTTCTCGGAAATCA TCTTGCCTTTAATCCAACACGATGATCGCAAATATCTCGAGCTGTATCTA AGGTCATGGAAATGCCACTTGGCACACGAACAAATCTCAAGTATTAGGAT CAATTTGGATTTAAGATGTGGCACCTAAATACAGGAAATTGACGCTTACG GCAGTCGGCCGTGTACAATTCCGACACAATCCCTGCTAGATAAGGAGGCC AAAACCCCTTTGGAATTTATTTGTGACGAACACCCACAGACATTATCACG GGGGAAAGGAGTTCTATAGACAATGCAGACAGTCCTGTAGTTCTAATTCC ACACACACACGAACAGGGGTTCCACGAGTTGGCATGGTTTGGAGTTTAAC CACGGCGGCACATGATCAAAACGCGAAGCACAAACCACATCAGGATTAAT TGACTGTGCAGGGTGTGAACCCCGCAGAAAGCCGCATGCCAGGACATGTA ATCAAGAACACTACACCATGGCTCTCGCGGTGCCTTTCCGTCACCTGCAG ATGGTACAGACAGTGCAGACAGCAAATGCAGAAATACTTGTCGCATACCT GCACCTGTATCGTTGTTGATGAAAGCATCGGCCGCAGCCACCGTTAATCA GATCACAAGGGCGTCGCCCAAGAAAACACAGCGACCCAAACATGAAATGA AGAAGCGTACACGTTTTGCCCATGCCCCCTCAATCGCTCGAAGGATTGTG TAAGGATCCTGTCACCCCAAACTATTTGGGGGTTGTACAGGAGACAACAC ATTTTTCATTGGCCGTTGAATGAACAAACGTGCATGATTGGCTTAACCCT ATGCCTTTCGTGGACAACTTGCCGTCATGATTCAGCACTAAGAGGTCGGG AGCTGCCCCCCGTCGTCGTCGTCGTCAAAAACGATCTTCCCCCTTTTCGC GACGGTTTCGCCGCAGGACTGTCAGATGCTTTTATTGTTCTTTTGTGTGC CCGCGTGTCATAGGGGTTAATTTAGGTCATGTCATAGATCACATCAATCT TGTGCAAGTTGATCGCTGTGCATGAGAGCGTTGCAAAGAACTTGGAACTG TCCTTGTAACATGTTTATGTGTAAACAGGTTAAATAGATCATGAAGCGTA TCTTAAGGTTACAGCACGAAACGATGAGCGGATCCTTCACTAAACGAATC ATGTTAAACGCGGTGGGCACGCCACGCGTGCTGCAGCTGGTAAATTTAAT ATATGTATACCTCGTGCAACACGTGCGCTGTTTGTCCGTGGCAATGCTCG AGGGAAACTTATTACCTAAACCGTTGTTTATTTTTGTCCATGTAATCGTG TTTGTAACTACAAAAACGGTGCCTGATAATCAGTCCTGCTCGTTACAGTC CGTCCGAAAGATTGGTCGCATGTAACGGGAGCTAACCTCTTTTCATATGT TTCCGAACTTGTTATGTATCAAGACGTTAACTTAGCTCGTTGAATCGAAT TGCGTGAGACCGTTGCAAGACGAAGCTCATGATCCGAAGCACACGAGTAA CTCCTTGCTCCTGTTGTTACAGCTGAAACATCAGCGCACTAGCCTCCTGT AATACCGGGAAGCCAGCCGTGCTCAGTACTCAGTCAGTACTAGCTAGACG CAAGTCAAATAGGACTAAAGTAAGCTGTTTTGTGCCGGATTAAGCTGTAT TGGGACAAGAAATGAATCTGGCAACCGATGTCAAGCCCTGCAAAAGTTGT GTGCGCAGAACAGCGCTATCTCTATGCTTAATCTGCAAGTTCTCTCTGTG CTGCTTGGCCGCGTTTGCTTCGGAAAATTGTGTGGATATTGTTTTGTGCA CGTAGCAACCGTGAAGCGTGTTCTGCGGGCGGAGCTACCGACAGTCATGA AGCCGCCGGCAGACGCGGGCTTACCTCCCCCACTAACAGTAAGTTCTGCA TCTGTTACATGCTGGCAATAAGAAAGTGCTTTACATGTAGAAGTTGAGAC GAGGTATGTTAAGAAGTGTTCCGAGAAGCGGTCCCCATTACGACAGCGTT ACGGAATTTCTTGGATCAAGGGTATGGCTTTCGTTTTTCACATTTTTATT TCTGCATCCTTACACGCCTAATTGTTGGATACTCCGTTGTAAATTCGATC TCATGCAACAAGCCGAAATCCAATATTTGGTGTGATAGCCATTTCCTGAC TGTAGGTAATTATATTTTACCGTCCGGCTTGAAACGTTGCCTCGTAACAA ATATCATGAAGTGTCTCTAATTTTGCTCTCATGACTAACGGACCAAAGCC CAAATGGGTAGGGTAACGGTGAATTGGGCAAATCTAGGAGTCATCTAAAC GGTTTTATAGTGGGTGCGGGTTTCATTTGTGACCCAATCTCTGTATTGCC CCATGTGTTTGATATCGGCACATAGGCGCCCACGCTGCGAGCGGTCCCCT TTGAGACTTAATTCTACGGAGATGCGGAAATGTTGGTCGTGTGGAAATGG ATGGAGAAATCACAGCAGGACCGGCCTGCGAAAGTTGCGACGTGAATGCG AATCACGAGTATCAGAAAAGGTTTTCCCCTGGTCTACTTCCTGGAGATTA GAAAAAAAAAGGTGTAAATCTCTTGTAGCCACGATCAATTTCAGGGTATA TGCAACACGTGCGCGTGTTCAAGATTAAGACAAAGCCAAAAGCAGGCTAA CCAGCCAGGTATTCCCTAAATAACCCCCCCCCCCCCCCGTCCGACCACAT GCCCTGAATACAAAAATTAGACGGAGAGACGAACCTTCTTTGGTAAAACA GTAAGGACCTACGATAATCCGTGGGCGCCCGGAGCAACGGCCAAAAAAGT AGGCGACCTATGGAAGGTCATGAAAAGCGAGGACATGGCCAAGGTCCCCT CTGCTATAGATGTAGAGAAAGATTTGCCGTCGGCCGAGGTGGGTGCGACG GTTCGGAGAAGTTTTGTGGGGGGAAGGAGGCAAATCCGGGGGGCGGGGGG AGGGGGGGGTAACTCGTAGCTTTACTGCAAAGTCGACACACACTCTAGCC TTTGTACTGACCAACCGCTGTTTACCTACAAGGTTCCTCTGGTTTGGCAT GTTGGTACCGGGTAGCTTCAGCAATGTCATAATACAAAACGTGCCGCTTT TTTTCTTTTTTTTTCTTGGTCGGTCTTGTCAACTTAAGAGAGTCATGTCA TGGGCCTAGCATGTTATCAGCAACGATACCGCAGGCCCTCCTCCGCATGA AGCACCCCGTAGTACACCAGCGCTGCAGTGTACATACCATAGTTATTAGA TAACACAATACCGCATGTATCGAGCTCCTAAAAATATCGTTGCTGTGCAC ACGTGTTATAGGGCTAGCACGTACTTGGAAAACAACGTCTGAGCGGTGCA CGGAGGGGGTGGAAGAACAAACAACCGTGGAAACTCGCCGGGAGGCATAA CCGTCCGAAAGGCGTGCGAATCTCGTAAAGCGATCCTGTTCAAGCTTTGA AAATGCCGTCCTCCATAACTTAGGAACCCCGGCGATTGGTACAGTAAGGC AGACCGGGTCATATTTTGTCTGAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig83:7368..11792-

>mRNA_H-paniculata_contig83.16320.1 ID=mRNA_H-paniculata_contig83.16320.1|Name=mRNA_H-paniculata_contig83.16320.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=966bp|location=Sequence derived from alignment at H-paniculata_contig83:7368..11792- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGATAGACGACGTCCTTGCCGACCTGACTGGCGCTCTGCAGAAGA
AGAAGGACGTCACGAAAAATCACCACCGTCACCATTGTTGTCAATGAGGT
CTTGCACTTTAGCACGAAACTCAGTAGCAGCAACAAAAATGGCGCGCACG
TTTCAATCGGCTGCTGCGAAGGGTATGTCCAGCACAACCGCAGTGGACGA
TGCTTCTAGCACTAGGGCTGTTGAAGATGAGTGATAGACGACGTCCTTGC
CGACCTGACTGGCGCTCTGCAGAAGAAGAAGGACGTCACGAAAAATCACC
ACCGTCACCATTGTTGTCAATGAGGTCTTGCACTTTAGCACGAAACTCAG
TAGCAGCAACAAAAATGGCGCGCACGTTTCAATCGGCTGCTGCGAAGGGT
ATGTCCAGCACAACCGCAGTGGACGATGCTTCTAGCACTAGGGCTGTTGA
AGCAACCGTGAAGCGTGTTCTGCGGGCGGAGCTACCGACAGTCATGAAGC
CGCCGGCAGACGCGGGCTTACCTCCCCCACTAACACAACCGTGAAGCGTG
TTCTGCGGGCGGAGCTACCGACAGTCATGAAGCCGCCGGCAGACGCGGGC
TTACCTCCCCCACTAACAACGGAGAGACGAACCTTCTTTGGTAAAACAGT
AAGGACCTACGATAATCCGTGGGCGCCCGGAGCAACGGCCAAAAAAGTAG
GCGACCTATGGAAGGTCATGAAAAGCGAGGACATGGCCAAGGTCCCCTCT
GCTATAGATGTAGAGAAAGATTTGCCGTCGGCCGAGACGGAGAGACGAAC
CTTCTTTGGTAAAACAGTAAGGACCTACGATAATCCGTGGGCGCCCGGAG
CAACGGCCAAAAAAGTAGGCGACCTATGGAAGGTCATGAAAAGCGAGGAC
ATGGCCAAGGTCCCCTCTGCTATAGATGTAGAGAAAGATTTGCCGTCGGC
CGAGGGCTAGGGCTAG
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