mRNA_H-paniculata_contig8255.16274.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: D8LBF3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBF3_ECTSI) HSP 1 Score: 506 bits (1302), Expect = 2.720e-177 Identity = 288/366 (78.69%), Postives = 320/366 (87.43%), Query Frame = 1
Query: 1 DADMFMEDFGDALNEDGDSWQAKVGRGATETLDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSNFKRFEERQAIRRHEQSVTDKVLAEERALQEQLRAXXXXXXXXXXXXXLRAEERRNLEEK 1098
D D FMED+GD+LN+ GD ++ K R A E LDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDV+TLQKILD EFE+EKES+IK QREKREQAAKQAGL RKRMMLERQLREEISEI K+ RIEFWL LVKQN+TP ARI NS+TARALAK+MWTNTSLTSLDLS NGIDD AGTY+ARLLKRNTALVN+ALGSNQLGV C +FGESL SN TLK LSLESN+LTS G + SGI AL +MFS+N+TLTS+NLWRCALGA+AG ALSRGMESN TITFLE+G NG+AM DQHK+K AL++NFKRFEE QA+RR E S+ DK+LAEE+A+QEQLRAXXXXXXXXXXXXX AEERR EEK
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYETKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLNLVKQNATPPTARIDVNSVTARALAKSMWTNTSLTSLDLSRNGIDDAAGTYVARLLKRNTALVNVALGSNQLGVFACRAFGESLCSNSTLKCLSLESNSLTSDGANMSGIQALTDMFSKNSTLTSVNLWRCALGAEAGVALSRGMESNHTITFLEVGLNGLAMADQHKVKTALENNFKRFEECQAVRRQELSIADKILAEEKAMQEQLRAXXXXXXXXXXXXXXXAEERRKAEEK 368
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A835YIK2_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIK2_9STRA) HSP 1 Score: 247 bits (631), Expect = 1.690e-75 Identity = 156/339 (46.02%), Postives = 198/339 (58.41%), Query Frame = 1
Query: 88 ETLDAS-LQAPNANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSNFKRFEERQAIRRHEQSVTDKVLAEERALQEQLRAXXXXXXXXXXXXXLRAEERRNLEEKR 1101
ET D S LQAPNANDFSNARLIEELE R R +GFRDQD++ LQK+LD EFE EKE LI+Q EK+EQA K+AGL R+R LE+QL EE E+ +N + WL+LVKQ+ TP ARI+ NSI+ARALAKAMWTNTSLTSLDL+ N +DD AG Y LT+ G +G + + S+N LTS+NLWRC LG AG L+ G+++N TITFLE+G+N +A+ D +I A + N ++ Q +Q D++L EE+ Q+ LR LRAEERR EE+R
Sbjct: 39 ETFDTSQLQAPNANDFSNARLIEELEGRRMRPTGFRDQDIIALQKVLDAEFEQEKEHLIRQHNEKKEQAMKEAGLQRRRAQLEKQLTEEKQEVAQNKIVAGWLSLVKQDETPLTARIEVNSISARALAKAMWTNTSLTSLDLARNNLDDFAGAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTNEGEKPAGFRYMVQALSKNAALTSLNLWRCGLGTPAGHDLAAGIQANRTITFLELGNNSLALSDLRQIGARVKDNRCHYDALQQQAMAKQREQDRILQEEKKAQDLLRKERELHDWLEAQRLLRAEERRAEEEER 377
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A6H5JI07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI07_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.390e-59 Identity = 109/134 (81.34%), Postives = 118/134 (88.06%), Query Frame = 1
Query: 1 DADMFMEDFGDALNEDGDSWQAKVGRGATETLDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLV 402
D D FMED+GD+LN+ GD ++ K R A E LDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDV+TLQKILD EFE+EKES+IK QREKREQAAKQAGL RKRMMLERQLREEISEI K+ RIEFWL LV
Sbjct: 3 DNDAFMEDYGDSLNDAGDPYEPKTTRNAAEALDASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVVTLQKILDAEFELEKESIIKHQREKREQAAKQAGLQRKRMMLERQLREEISEIGKDQRIEFWLHLV 136
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A7R9VZE3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VZE3_9STRA) HSP 1 Score: 189 bits (481), Expect = 7.570e-54 Identity = 107/251 (42.63%), Postives = 162/251 (64.54%), Query Frame = 1
Query: 121 ANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNG 873
AN + L++ELE R + GF D LQ+ DEE E+ E+ +++RE RE AK+A R+R+++E ++REE EI ++ R++ WL L ++ P +RI+ N+I+AR+LAKA+ T++S+ LD+S G+ D+AG Y+ R L+ N L+ I LGSN+ G C S G++L SN ++ +SLESN LT D SGI A+AEM S+N L ++LWRC GAD+G A++ M N +T +E+G+NG
Sbjct: 50 ANALTLNELVQELEKRGLQARGFFADDAKVLQEKFDEEHELYVEAKRREKREAREADAKRAAEQRRRLLMETEVREEREEIGRDRRMKSWLLLTEEGMAPPHSRIEVNNISARSLAKALLTDSSILCLDVSNLGLSDLAGAYLCRALRSNRTLIKIELGSNKFGPKTCKSLGDALTSNNVVRFVSLESNPLTGEKNDISGIIAIAEMLSKNKALRYLSLWRCGTGADSGKAIADAMAFNDALTCIEVGYNG 300
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: F0Y577_AURAN (F-box domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y577_AURAN) HSP 1 Score: 164 bits (416), Expect = 2.710e-41 Identity = 112/305 (36.72%), Postives = 166/305 (54.43%), Query Frame = 1
Query: 22 DFGDALNE--DGDSWQAKVGRGATETLD-ASLQAPNANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSNFK 927
D GD L + DGD + GR +++D A L+ +A L+ E+E R+ GF + D LQK D+E E E + +++RE+R+++ +A L +KR+ LE+QLREE + + +IE WL++V+ + T +ARI NS+TARALAKAMW N SLTSLDLS N + D AG I R+LKR T+ D +G+ ALA+ S N +LT +NLWRC LG AGA L++ + N +I L++G+NG+ + D+ +I +D+N K
Sbjct: 12 DAGDVLEDADDGD----ENGREREDSIDLADLKPMDAFLMKMEDLVTEMERRHLHPKGFFNDDAKELQKYFDQEHFKELEKIKEERREQRQRSXMKAQLQKKRLQLEKQLREEQDAVANDPQIEAWLSVVRSDQTRPSARIGVNSVTARALAKAMWNNKSLTSLDLSRNDLSDFAGAQIGRMLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNESTDQTGVVALAQALSSNASLTLLNLWRCDLGTTAGAELAKALHLNSSIINLDVGNNGVLVADKRRIADKVDANKK 312
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A7S3ZT07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT07_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.800e-41 Identity = 106/307 (34.53%), Postives = 160/307 (52.12%), Query Frame = 1
Query: 79 GATETLDASLQAP-NANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSNFKRFEERQAIRRHEQSVTDKVLAEE 996
G + LD S P +A + L+ E E R GF + D LQK+LD+EF E L ++R ++ +A L +KR+ LE+QLREE I + + WL +K N T A RI+ +SI RALAKA+W+++S+T LDLS NG+ D AG + R+LKRN ++E+N LT+ D +G+ ALA+ N TLT +N+WRC LG AGAA++ + +N T+ ++GH GI +D +I + N + E +A + E++ D++ EE
Sbjct: 28 GGDDDLDFSDMKPMDAFEMKMEDLVVEFERRGMHPKGFFNDDARELQKVLDKEFSENLEKLKAEKRAALQRNRMKAKLQKKRLQLEKQLREEQDAIHDSLDAKAWLNTIKNNQTRDACRIECDSIVCRALAKALWSSSSITCLDLSRNGLSDFAGAQLGRMLKRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMETNPLTNESTDQTGVVALAKALGSNTTLTRLNMWRCDLGTAAGAAIADALVANETLIDFDVGHGGILELDAQRIADRIAHNKR---ETKAKNKREKAYRDQLAREE 331
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A7S3XPA2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPA2_HETAK) HSP 1 Score: 144 bits (362), Expect = 1.520e-35 Identity = 97/283 (34.28%), Postives = 141/283 (49.82%), Query Frame = 1
Query: 79 GATETLDASLQAP-NANDFSNARLIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGV-DSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSN 921
G T+ +D P +A +N L ELE R + GF D LQK D E E +K++ E++E+ A QAGL R++ ++E+QL+EE+ I+++ R E WL LV+ ++TP AR++ S+ AR LAKA+W N SL SLDLS NG+DD AG + LT G+ + +G A+M NNTLTS+NL+RC LG +AG L G+E N ++ FL++G N +I + N
Sbjct: 36 GTTDLMDLQDSQPRDALRLTNDELNAELEMRGEKPKGFFTDDAKVLQKYFDVEHEEYLAKQMKERAEQQEKLAAQAGLIRRKRLVEKQLKEELLAIQRDRRAEHWLALVRGDATPPQARVELGSVAARCLAKALWGNGSLVSLDLSRNGLDDKAGAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTESGLAEKTGAPEFADMLKHNNTLTSLNLFRCHLGPEAGTELLGGLEQNASLVFLDVGGNHFLQSHDARINGKIQEN 318
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: B8C189_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C189_THAPS) HSP 1 Score: 133 bits (334), Expect = 4.190e-32 Identity = 87/246 (35.37%), Postives = 131/246 (53.25%), Query Frame = 1
Query: 145 LIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQA----AKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHN 870
++ ELE + + GF D +Q+ D+E E +K +R + A AKQ RK +LE+++ +E I + ++ W L+ S P RI N I++RALAKA+W+N+ + SLD+S + D+AG Y++R L+ N LV + LG N G S +SL N TL+ LSLESN L I + N LTS++LWRC LG +AG LS + N ++ +E+G+N
Sbjct: 91 ILTELERKGIQPIGFYSDDAKRVQRCFDQEHE----EYVKDKRNEALAAKVYEAKQQAERRKAALLEQEIVDEKKAISNDLQLLSWFNLLSTQSCPRHCRIDINDISSRALAKALWSNSRIQSLDVSNMHLSDLAGAYLSRSLQNNICLVKLELGGNAFGSKTLRSLADSLFVNRTLQFLSLESNPLAKDDTREC-ISLFSSALESNTRLTSLSLWRCGLGLEAGRMLSNSISKNSSLIIVEVGYN 331
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A6G0XP15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP15_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.450e-30 Identity = 90/264 (34.09%), Postives = 132/264 (50.00%), Query Frame = 1
Query: 145 LIEELENRNSRVSGFRDQDVLTLQKILDEEFEVEKESLIKQQREKREQAAKQAGLHRKRMMLERQLREEISEIEKNHRIEFWLTLVKQNSTPSAARIKANSITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDSSGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLEIGHNGIAMIDQHKIKAALDSNFKRFE 936
L EL +R + GF + D LQ+ D E EKES ++Q+ + ++ + + RKR LE +LREE+ E+ +N ++E WL LVK N+TP A ++ NSI RAL+K + N SL +L+LS N ++ N LT+ D SGI A+ M ++NNTLTS+NLWR LG D G AL++G++ N T+ L+IG+N IA+ D I L N R++
Sbjct: 55 LRRELIDRGIQPKGFFNDDATRLQEEFDREHVAEKESRMRQKIQMAAKSYLRETIKRKRQQLETELREELDELAENPKLEVWLDLVKSNTTPQEALLRVNSIATRALSKVLPFNLSLRALNLSGNQLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLTADENDFSGIAAIGAMLTKNNTLTSLNLWRTRLGIDGGKALAKGLQGNKTMLCLDIGNNKIALADAAAISTTLADNLARYD 318
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Match: A0A7S1ZJ98_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZJ98_TRICV) HSP 1 Score: 106 bits (265), Expect = 2.280e-24 Identity = 56/138 (40.58%), Postives = 92/138 (66.67%), Query Frame = 1
Query: 448 ITARALAKAMWTNTSLTSLDLSCNGIDDVAGTYIARLLKRNTALVNIALGSNQLGVSVCHSFGESLRSNITLKALSLESNALTSGGVDS-SGIHALAEMFSRNNTLTSINLWRCALGADAGAALSRGMESNCTITFLE 858
++ARALAKA+ T++++ SLD+S G+ D+AG ++ R L++N +++ + LG N+LG C S G++L +N L+ ++LESN LT D SGI A+A M +N TL ++LWRC +G + G ++ + SN +T +E
Sbjct: 2 VSARALAKALLTDSAMVSLDVSHAGLSDLAGAFLCRALRKNRSMIKLELGGNRLGPKTCRSLGDALCTNDALQFVNLESNPLTGEKADDMSGIVAIAHMVRQNKTLRYLSLWRCDIGPEGGEIVADAVCSNNILTCIE 139 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8255.16274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8255.16274.1 >prot_H-paniculata_contig8255.16274.1 ID=prot_H-paniculata_contig8255.16274.1|Name=mRNA_H-paniculata_contig8255.16274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=365bp MFMEDFGDALNEDGDSWQAKVGRGATETLDASLQAPNANDFSNARLIEELback to top mRNA from alignment at H-paniculata_contig8255:2019..3699+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig8255.16274.1 ID=mRNA_H-paniculata_contig8255.16274.1|Name=mRNA_H-paniculata_contig8255.16274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1681bp|location=Sequence derived from alignment at H-paniculata_contig8255:2019..3699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig8255:2019..3699+ >mRNA_H-paniculata_contig8255.16274.1 ID=mRNA_H-paniculata_contig8255.16274.1|Name=mRNA_H-paniculata_contig8255.16274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2190bp|location=Sequence derived from alignment at H-paniculata_contig8255:2019..3699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |