prot_H-paniculata_contig7943.15974.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig7943.15974.1
Unique Nameprot_H-paniculata_contig7943.15974.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length833
Homology
BLAST of mRNA_H-paniculata_contig7943.15974.1 vs. uniprot
Match: D8LIR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR9_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 1.540e-60
Identity = 130/266 (48.87%), Postives = 171/266 (64.29%), Query Frame = 0
Query:    8 EDNDEVCGEMRRAYEVLKELEFSILHKHVELQGVVRQER-VLEDLFSRARDARSLLCSSLSLGQLSK--GLVNEEKPP--VGLADDFPYHDPGELPVMQSRRAQRDAEQTLTWAADETAGWSPEAAAVEKKRRQELAERAAAAARETESAWLPKRLSGGRRGQTGRGRGVPVPGGVAHPFIVTQREADFLYSIGLGDFVEARDEWDTWCLGQVIAVRGEGGWCASTDSNILRAVKVSFRGAGPAMDAWLPMDSGMLAQPGTHLPES 268
            ED DEV  E+RR      ++    L+   EL    RQER V + +F R   A+ +L ++L L ++ K   L  +   P  VGLADDFPYHDP +LPV+++ R Q  A Q      +E  G+       E+ RR+++A  A A A      W   RL+ GR+GQTGRGRG+P+PGGVAHPF++ ++ ADFLYS+G GD VE +DEWD WC  +V+AVRGEGGW    D+N+LRAVKVSF G+GPAMDAW  +D GM+A+PGTHLP S
Sbjct:  529 EDIDEVSWELRRLARDEVKVNAKNLYALSELGAYCRQERKVYQSVFDRDEWAKDVLSNALRLSEVGKTVDLKGKRAKPRGVGLADDFPYHDPTQLPVLEALRKQTVAYQHHQRNQEEMGGFGLAEIEQERARREKVANEATAVAEAKMKDWEHARLAVGRKGQTGRGRGIPIPGGVAHPFLLDKKTADFLYSVGTGDEVEVKDEWDVWCRAKVVAVRGEGGWDPKKDTNVLRAVKVSFEGSGPAMDAWCSVDGGMVAKPGTHLPLS 794          
BLAST of mRNA_H-paniculata_contig7943.15974.1 vs. uniprot
Match: A0A6H5J8Y2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y2_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 5.150e-59
Identity = 131/269 (48.70%), Postives = 172/269 (63.94%), Query Frame = 0
Query:    9 DNDEVCGEMRRAYEVLKELEFSILHKHVELQGVVRQER-VLEDLFSRARDARSLLCSSLSLGQLSK--GLVNEEKPP--VGLADDFPYHDPGELPVMQSRRAQRDAEQTLTWAADETAGWSPEAAAVEKKRRQELAERAAAAA----RETESAWLPKRLSGGRRGQTGRGRGVPVPGGVAHPFIVTQREADFLYSIGLGDFVEARDEWDTWCLGQVIAVRGEGGWCASTDSNILRAVKVSFRGAGPAMDAWLPMDSGMLAQPGTHLPES 268
            D DEV  E+RR      ++    L+   EL    RQER V + +F R   A+ +L ++L L ++ K   L  +   P  VGLADDFPYHDP +LPV+++ R Q  A Q      +E  G+       E+ RR++ A  A A A    ++    W   RL+ GR+GQTGRGRG+P+PGGVAHPF++ ++ ADFLYS+G GD VE +DEWD WC  +V+AVRGEGGW   TD+N+LRAVKVSF G+GPAMDAW  +D GM+AQPGTHLP S
Sbjct:  555 DIDEVSWELRRLARDEVKVNAKNLYVLSELGAYCRQERKVYQSVFDRDEWAKDVLSNALRLSEVGKTVDLKGKRAKPRGVGLADDFPYHDPTQLPVLEALRKQTVAYQHHQRNQEEMGGFGLAEIEQERARREKAANEATAVAEAKMKQPTKDWEHARLAVGRKGQTGRGRGIPIPGGVAHPFLLDKKTADFLYSVGTGDEVEVKDEWDVWCRAKVVAVRGEGGWDPKTDTNVLRAVKVSFEGSGPAMDAWCSIDGGMVAQPGTHLPLS 823          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig7943.15974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIR9_ECTSI1.540e-6048.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8Y2_9PHAE5.150e-5948.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig7943contigH-paniculata_contig7943:1564..8060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig7943.15974.1mRNA_H-paniculata_contig7943.15974.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig7943 1564..8061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig7943.15974.1 ID=prot_H-paniculata_contig7943.15974.1|Name=mRNA_H-paniculata_contig7943.15974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=833bp
GGGGDVVEDNDEVCGEMRRAYEVLKELEFSILHKHVELQGVVRQERVLED
LFSRARDARSLLCSSLSLGQLSKGLVNEEKPPVGLADDFPYHDPGELPVM
QSRRAQRDAEQTLTWAADETAGWSPEAAAVEKKRRQELAERAAAAARETE
SAWLPKRLSGGRRGQTGRGRGVPVPGGVAHPFIVTQREADFLYSIGLGDF
VEARDEWDTWCLGQVIAVRGEGGWCASTDSNILRAVKVSFRGAGPAMDAW
LPMDSGMLAQPGTHLPESVIPATARMRTPNRTTTKPTETPTDAPLAKHST
AVTASRAYGLIATATAAAAATATASSINDYLPPLSQPTVISSVVTPVTTS
TTTTITAAAAAAGATPLLGAAVEAPDHTRSLDMMDNSAVEEHNTPSSSNN
HINPDGVSSSLQGVDSGEVGEKKSSRIVDTDGQGSVGDSDRALIPRRAAK
RQRERSPSPPGARRATGWGDGAKQPAVAWQSETVAKRVRDAAAMAGDFQT
ADELEPERPRAAATAVPATVATSSGRVDGWMPARDPRLHLRSTRAVDRSG
SRRAGDRDSNFRGGASSSASGGGESGVDLTTRVPGTAIHGLQSNGHHRGV
DWSGSASTGGNVYATPRVAREPPKPQLHAAAGPTTGGGSLRVVVLASNGN
VCQEDHSSRTRPIGRESPPATTARGQLPHASSVQTPLISPSRPWQANPGQ
SQQANAGPHVLPIPVNANVPSAVAEQAVSPNAAVPPDHCERHDPLCATTR
TAAVRGGGSGGGGSGGGSRVAEVGGRCQKRAYSGGGGVGEGRGVVGSGAI
AAKGWDMGGRDVFDANGGQNGTSGAGAGAGGGG
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