mRNA_H-paniculata_contig792.15948.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: D8LJS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS1_ECTSI) HSP 1 Score: 105 bits (261), Expect = 2.660e-25 Identity = 67/79 (84.81%), Postives = 71/79 (89.87%), Query Frame = 2
Query: 281 MANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTKTANSGGQAKPQ 517
M++ K +EKVPV EVLEEDDEFEEFAEANWDE AEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTK +G QAKPQ
Sbjct: 1 MSDVKVEEKVPVAEVLEEDDEFEEFAEANWDETAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTKPPATG-QAKPQ 78
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A7S2CP29_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP29_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 2.740e-11 Identity = 40/75 (53.33%), Postives = 51/75 (68.00%), Query Frame = 2
Query: 281 MANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTKTANSGGQ 505
+A ++K + P EVLEEDDEFEEFAE NWD++AED ED QW++D DF NQLRAEL T ++GG+
Sbjct: 15 VAPAEEKPEAPKLEVLEEDDEFEEFAEKNWDKSAEDGEDAAQWEEDWDDGELDDDFTNQLRAEL--TAPGSTGGR 87
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A7S4EAY6_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAY6_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.720e-8 Identity = 38/75 (50.67%), Postives = 44/75 (58.67%), Query Frame = 2
Query: 269 RYLLMANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKTKTAN 493
R N +++ P EV EEDDEFEEFA+ NWD AAED ED + WQDDX DFC LR EL+K N
Sbjct: 105 RSPTQENKPAEKRKPDYEVYEEDDEFEEFAQDNWDAAAEDAEDPKLWQDDXDDDDVDDDFCRHLREELQKPVEKN 179
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A6A3T8R4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T8R4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 9.320e-8 Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 2
Query: 302 EKVPVTEVL-EEDDEFEEFAEANWDEAAEDQED--LQQWQDDXXXXXXXXDFCNQLRAELEKTKT 487
EKVP V+ EEDDEFEEF +A+W+ AE+++ QQWQDD +FCNQLR EL+KTKT
Sbjct: 21 EKVPALVVVTEEDDEFEEFEDADWNGQAEEKDAHIKQQWQDDWDVDEADDEFCNQLRKELQKTKT 85
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A7S1ZHX0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZHX0_TRICV) HSP 1 Score: 57.0 bits (136), Expect = 5.510e-7 Identity = 31/56 (55.36%), Postives = 34/56 (60.71%), Query Frame = 2
Query: 311 PVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEK 478
P+TE +EEDDEFEEF WD ED ED QQWQD+ DF LRAEL K
Sbjct: 38 PITEAIEEDDEFEEFEPCRWDAHDEDAEDAQQWQDNWDDDDIEDDFTKNLRAELTK 93
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A8J5X4N4_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X4N4_DIALT) HSP 1 Score: 55.8 bits (133), Expect = 6.280e-7 Identity = 35/66 (53.03%), Postives = 41/66 (62.12%), Query Frame = 2
Query: 281 MANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEK 478
MA+ K +E + ++LEEDDEFEEF +WD AED ED Q WQDD DF QLRAEL K
Sbjct: 1 MADQKKEEDL---DMLEEDDEFEEFEAESWDLTAEDAEDQQLWQDDWDEDDAKNDFTQQLRAELAK 63
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: I1CD22_RHIO9 (26S proteasome complex subunit DSS1 n=2 Tax=Rhizopus TaxID=4842 RepID=I1CD22_RHIO9) HSP 1 Score: 53.1 bits (126), Expect = 9.410e-6 Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 2
Query: 275 LLMANDKDKEKVPVTE-------VLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEK 478
+ A +++K+K E VLEEDDEFEEFA +W E EDQ D W+D+ DF QLRAELEK
Sbjct: 1 MASAQNQEKQKGMAEEKNLAALGVLEEDDEFEEFAAEDWGEEEEDQNDAHFWEDNWDDDDIEDDFSKQLRAELEK 75
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A0U2T7H1_9MAXI (Putative 26S proteasome complex subunit DSS1 n=1 Tax=Pseudodiaptomus poplesia TaxID=213370 RepID=A0A0U2T7H1_9MAXI) HSP 1 Score: 51.6 bits (122), Expect = 2.230e-5 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 2
Query: 320 EVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELE 475
++LEEDDEFEEF + +WD EDQ D++ W+D+ DFCNQLR LE
Sbjct: 9 DLLEEDDEFEEFEQEDWDIRREDQTDIKVWEDNWDNDDLESDFCNQLRKVLE 60
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: L1J5M5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5M5_GUITC) HSP 1 Score: 51.2 bits (121), Expect = 3.300e-5 Identity = 29/65 (44.62%), Postives = 37/65 (56.92%), Query Frame = 2
Query: 278 LMANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAEL 472
+ N K++ K V E++EEDDEFEEF + W E E+ ED Q W DD +F QLR EL
Sbjct: 1 MSKNAKEETKQQVNEIVEEDDEFEEFEDEGWMERKEEPEDKQYWADDWDNDDINEEFAAQLRTEL 65
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Match: A0A0D2WWT7_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WWT7_CAPO3) HSP 1 Score: 51.2 bits (121), Expect = 4.010e-5 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 2
Query: 293 KDKEKVPVT---EVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDXXXXXXXXDFCNQLRAELEKT 481
KD ++ P T ++LEEDDEFEEF + W+ +AED+ D Q W+D+ DF QLRAEL ++
Sbjct: 9 KDAKQEPATANVDLLEEDDEFEEFPQEEWNGSAEDKTDQQLWEDNWDDDAAEDDFAKQLRAELSQS 74 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig792.15948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig792.15948.1 >prot_H-paniculata_contig792.15948.1 ID=prot_H-paniculata_contig792.15948.1|Name=mRNA_H-paniculata_contig792.15948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp MANDKDKEKVPVTEVLEEDDEFEEFAEANWDEAAEDQEDLQQWQDDWDDDback to top mRNA from alignment at H-paniculata_contig792:24127..27769- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig792.15948.1 ID=mRNA_H-paniculata_contig792.15948.1|Name=mRNA_H-paniculata_contig792.15948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3643bp|location=Sequence derived from alignment at H-paniculata_contig792:24127..27769- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig792:24127..27769- >mRNA_H-paniculata_contig792.15948.1 ID=mRNA_H-paniculata_contig792.15948.1|Name=mRNA_H-paniculata_contig792.15948.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig792:24127..27769- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |