prot_H-paniculata_contig78760.15896.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig78760.15896.1
Unique Name	prot_H-paniculata_contig78760.15896.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	148

Homology

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: E6ZER9_ECTSI (Ribosomal protein L2 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER9_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.400e-87
Identity = 122/147 (82.99%), Postives = 141/147 (95.92%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK+L+YIM+GTLIHNLS++PG++AK+LR+PGAYGLILRRTKTLAK++LKSGQYRWFDIKTIATNGI+ N ++RF KL+KAGQSRW+ RRP+VRGVAMNPIDHPHGGGEGKTSGGRPS+TPWGKPTKGL T+R RVQPKPNVKI
Sbjct:  108 QNGHSKELRYIMSGTLIHNLSISPGENAKILRAPGAYGLILRRTKTLAKIRLKSGQYRWFDIKTIATNGIIGNTNNRFNKLKKAGQSRWIGRRPIVRGVAMNPIDHPHGGGEGKTSGGRPSSTPWGKPTKGLLTKRFRVQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A3G5FPP3_9PHAE (Ribosomal protein L2 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPP3_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 4.000e-87
Identity = 126/147 (85.71%), Postives = 136/147 (92.52%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSKKLQ++MTG++IHNLSL PGK AK+LR+PGAYG+ILRRTK LAKV+LKSGQYRWF IKTIAT GIVSN +SRFKKL+KAGQSRWL RRP VRGVAMNPIDHPHGGGEGKTSGGRPS TPWGKPTKG STRR RVQPKPNVKI
Sbjct:  108 QNGHSKKLQHMMTGSIIHNLSLAPGKDAKILRAPGAYGIILRRTKNLAKVRLKSGQYRWFHIKTIATTGIVSNSESRFKKLKKAGQSRWLGRRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVTPWGKPTKGQSTRRYRVQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: Q94Z04_PYLLI (Ribosomal protein L2 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z04_PYLLI)

HSP 1 Score: 258 bits (660), Expect = 3.790e-85
Identity = 122/147 (82.99%), Postives = 136/147 (92.52%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK L+ IMTG+ IHNLSL+PG  AK+LR+PGAYGLIL+RTK+LAK+KLKSGQ RWFDI+TIATNG+VSNPDSRF+KL KAG+SRWL RRP+VRGVAMNPIDHPHGGGEGKTSGGRPS TPWGKPTKG STRR RV+PKPNVKI
Sbjct:  108 QNGHSKSLRNIMTGSFIHNLSLSPGNDAKILRAPGAYGLILKRTKSLAKIKLKSGQSRWFDIRTIATNGVVSNPDSRFRKLEKAGRSRWLGRRPIVRGVAMNPIDHPHGGGEGKTSGGRPSVTPWGKPTKGPSTRRFRVKPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A089N303_PETFA (Ribosomal protein L2 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A089N303_PETFA)

HSP 1 Score: 257 bits (656), Expect = 1.540e-84
Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK L++IMTGTLIHNLS+ PG+ AK+LR+PGA GLIL+RTK LAKV+LKSGQYRWFDI+TIATNGI+SN DSRF KL KAGQSRWL RRP+VRGVAMNP+DHPHGGGEGKTSGGRPS TPWGKPTKG ST+R RVQPKPNVKI
Sbjct:  108 QNGHSKTLKHIMTGTLIHNLSIFPGQDAKILRAPGACGLILKRTKNLAKVRLKSGQYRWFDIETIATNGIISNSDSRFNKLYKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGKTSGGRPSVTPWGKPTKGKSTKRFRVQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A0U1XGN0_9PHAE (Ribosomal protein L2 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XGN0_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 1.540e-84
Identity = 122/147 (82.99%), Postives = 134/147 (91.16%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK LQYIMTGTLIHNLS+ PG++AK+LR+PGA GLIL+RTK LAKV+LKSGQYRWFDIKTIATNGIV N +SRF KL KAGQSRWL RRP+VRGVAMNP+DHPHGGGEGKTSGGRPS TPWGKPTKG  T+R R+QPKPNVKI
Sbjct:  108 QNGHSKSLQYIMTGTLIHNLSVFPGQNAKILRAPGACGLILKRTKNLAKVRLKSGQYRWFDIKTIATNGIVGNTNSRFNKLYKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGKTSGGRPSVTPWGKPTKGKFTKRFRIQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A8F0FDE7_9PHAE (Ribosomal protein L2 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FDE7_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.780e-83
Identity = 119/147 (80.95%), Postives = 135/147 (91.84%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK L+YI+TG+LI+NLS+ PGK  K+LR+PGA+G IL+RTK+LAK++LKSGQYRWFDI+T+ATNG+VSN DSRF KL KAGQSRWL RRP+VRGVAMNPIDHPHGGGEGKTSGGRPS TPWGKPTKG STRR RVQPKPNVKI
Sbjct:  108 QNGHSKTLRYILTGSLIYNLSIQPGKEGKILRAPGAFGKILKRTKSLAKIRLKSGQYRWFDIQTMATNGVVSNSDSRFTKLYKAGQSRWLGRRPIVRGVAMNPIDHPHGGGEGKTSGGRPSVTPWGKPTKGPSTRRIRVQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A8F0K125_9PHAE (Ribosomal protein L2 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K125_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 7.230e-83
Identity = 121/147 (82.31%), Postives = 134/147 (91.16%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK L +I+TG+LI+NLSL+PGK  K+LR+PGA+G IL+RTKTLAKV+LKSG YRWFDI+T+ATNGIVSN +SRF KLRKAGQSRWL RRP VRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKG STRR R QPKPNVKI
Sbjct:  108 QNGHSKALGHILTGSLIYNLSLSPGKDGKILRAPGAFGKILKRTKTLAKVRLKSGHYRWFDIRTMATNGIVSNAESRFTKLRKAGQSRWLGRRPTVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGPSTRRYRTQPKPNVKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A1I9LW86_9PHAE (Ribosomal protein L2 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW86_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 2.070e-82
Identity = 118/147 (80.27%), Postives = 133/147 (90.48%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK L+ IMTGTLIHNLSL+PG+  K+LR+PGA GLIL+RTK+LAK++LKSGQYRWF+IKT+ATNG+V N +SRF KLRKAGQSRW+ RRP+VRGVAMNPIDHPHGGGEGKTSGGRPS TPWGKPTKG  TRR RVQPKPN KI
Sbjct:  108 QNGHSKSLRQIMTGTLIHNLSLSPGEKGKILRAPGACGLILKRTKSLAKIRLKSGQYRWFNIKTMATNGVVGNTNSRFNKLRKAGQSRWIGRRPIVRGVAMNPIDHPHGGGEGKTSGGRPSVTPWGKPTKGQPTRRFRVQPKPNAKI 254

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BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: A0A2H4ZQZ8_9PHAE (Ribosomal protein L2 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZQZ8_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 4.160e-82
Identity = 121/147 (82.31%), Postives = 131/147 (89.12%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK LQYIMTGTLIHNLS  P + AK+LR+PGA GLIL+RTK LAKV+L+SGQYRWF+IKTIATNG+VSNP+ RF KL KAGQSRWL RRP VRGVAMNPIDHPHGGGEGKTSGGRPS TPWGKPTKG  T+R RVQPKPNVKI
Sbjct:  108 QNGHSKTLQYIMTGTLIHNLSTLPEQDAKILRAPGACGLILKRTKNLAKVRLRSGQYRWFNIKTIATNGVVSNPNFRFNKLYKAGQSRWLGRRPTVRGVAMNPIDHPHGGGEGKTSGGRPSVTPWGKPTKGKFTKRFRVQPKPNVKI 254

[Close]

BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Match: Q8LWZ7_9PHAE (Ribosomal protein L2 n=47 Tax=Laminariales TaxID=2886 RepID=Q8LWZ7_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 3.400e-81
Identity = 119/147 (80.95%), Postives = 132/147 (89.80%), Query Frame = 0

Query:    1 QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKVKLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVAMNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI 147
            QNGHSK LQ I+TG+LI+NLSL+PGK  K+LR+PGA+G IL+RTKTLAK++LKSGQYRWFDIKTIATNG+VSNPDSRF KL+KAGQSRWL RRP VRGVAMNPIDHPHGGGEGKTSGGR S TPW KPTKG STR  R+QPKPNV I
Sbjct:  108 QNGHSKTLQNILTGSLIYNLSLSPGKDGKILRAPGAFGRILKRTKTLAKIRLKSGQYRWFDIKTIATNGVVSNPDSRFTKLQKAGQSRWLGRRPTVRGVAMNPIDHPHGGGEGKTSGGRSSVTPWCKPTKGPSTRTNRIQPKPNVTI 254

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig78760.15896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
E6ZER9_ECTSI	1.400e-87	82.99	Ribosomal protein L2 n=2 Tax=Ectocarpus siliculosu...	[more]
A0A3G5FPP3_9PHAE	4.000e-87	85.71	Ribosomal protein L2 n=1 Tax=Cladosiphon okamuranu...	[more]
Q94Z04_PYLLI	3.790e-85	82.99	Ribosomal protein L2 n=1 Tax=Pylaiella littoralis ...	[more]
A0A089N303_PETFA	1.540e-84	82.99	Ribosomal protein L2 n=2 Tax=Scytosiphonaceae TaxI...	[more]
A0A0U1XGN0_9PHAE	1.540e-84	82.99	Ribosomal protein L2 n=1 Tax=Colpomenia peregrina ...	[more]
A0A8F0FDE7_9PHAE	1.780e-83	80.95	Ribosomal protein L2 n=2 Tax=Laminariales TaxID=28...	[more]
A0A8F0K125_9PHAE	7.230e-83	82.31	Ribosomal protein L2 n=1 Tax=Chorda asiatica TaxID...	[more]
A0A1I9LW86_9PHAE	2.070e-82	80.27	Ribosomal protein L2 n=1 Tax=Pleurocladia lacustri...	[more]
A0A2H4ZQZ8_9PHAE	4.160e-82	82.31	Ribosomal protein L2 n=2 Tax=Endarachne binghamiae...	[more]
Q8LWZ7_9PHAE	3.400e-81	80.95	Ribosomal protein L2 n=47 Tax=Laminariales TaxID=2...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 1..128 e-value: 1.3E-51 score: 187.5
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 2..126 e-value: 2.3E-42 score: 144.2
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..72 e-value: 7.0E-17 score: 63.0
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10		coord: 73..145 e-value: 1.7E-31 score: 110.1
None	No IPR available	PANTHER	PTHR13691:SF39	60S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL-RELATED	coord: 2..135
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 2..135
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 94..105
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 3..138

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig78760	contig	H-paniculata_contig78760:2..445 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig78760.15896.1	mRNA_H-paniculata_contig78760.15896.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig78760 2..445 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig78760.15896.1 ID=prot_H-paniculata_contig78760.15896.1|Name=mRNA_H-paniculata_contig78760.15896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
QNGHSKKLQYIMTGTLIHNLSLTPGKHAKVLRSPGAYGLILRRTKTLAKV
KLKSGQYRWFDIKTIATNGIVSNPDSRFKKLRKAGQSRWLSRRPVVRGVA
MNPIDHPHGGGEGKTSGGRPSATPWGKPTKGLSTRRCRVQPKPNVKI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022669	Ribosomal_L2_C
IPR014722	Rib_L2_dom2
IPR014726	Ribosomal_L2_dom3
IPR002171	Ribosomal_L2
IPR022671	Ribosomal_L2_CS
IPR008991	Translation_prot_SH3-like_sf